RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W SPP382Q06411 708 aaPredicted RBP4.51□□□□□ -1.69
UBP6YFR010W MRL1Q06815 381 aa4.51□□□□□ -1.69
UBP6YFR010W NSI1Q12457 570 aa4.51□□□□□ -1.69
UBP6YFR010W MDM12Q92328 271 aa4.51□□□□□ -1.69
UBP6YFR010W MSS18P08593 268 aa4.5□□□□□ -1.69
UBP6YFR010W PHO81P17442 1178 aa4.5□□□□□ -1.69
UBP6YFR010W AEP2P22136 580 aa4.5□□□□□ -1.69
UBP6YFR010W TRX1P22217 103 aaKnown RBP4.5□□□□□ -1.69
UBP6YFR010W RET1P22276 1149 aaKnown RBP4.5□□□□□ -1.69
UBP6YFR010W RPC53P25441 422 aa4.5□□□□□ -1.69
UBP6YFR010W CDC48P25694 835 aaKnown RBP4.5□□□□□ -1.69
UBP6YFR010W SPC29P33419 253 aa4.5□□□□□ -1.69
UBP6YFR010W UPF3P48412 387 aaKnown RBP4.5□□□□□ -1.69
UBP6YFR010W RAD17P48581 401 aa4.5□□□□□ -1.69
UBP6YFR010W PIL1P53252 339 aaKnown RBP4.5□□□□□ -1.69
UBP6YFR010W RBG2P53295 368 aaKnown RBP4.5□□□□□ -1.69
UBP6YFR010W YAP1802P53309 568 aa4.5□□□□□ -1.69
UBP6YFR010W MRPL19P53875 158 aa4.5□□□□□ -1.69
UBP6YFR010W HOT1Q03213 719 aa4.5□□□□□ -1.69
UBP6YFR010W DBP9Q06218 594 aaKnown RBP4.5□□□□□ -1.69
UBP6YFR010W YDL124WQ07551 312 aaKnown RBP4.5□□□□□ -1.69
UBP6YFR010W PCL8Q08966 492 aa4.5□□□□□ -1.69
UBP6YFR010W REX3Q12090 404 aa4.5□□□□□ -1.69
UBP6YFR010W YVC1Q12324 675 aa4.5□□□□□ -1.69
UBP6YFR010W ILS1P09436 1072 aaKnown RBP4.49□□□□□ -1.69
UBP6YFR010W HEM13P11353 328 aaKnown RBP4.49□□□□□ -1.69
UBP6YFR010W MER1P16523 270 aa4.49□□□□□ -1.69
UBP6YFR010W PRP9P19736 530 aaKnown RBP4.49□□□□□ -1.69
UBP6YFR010W MRPL25P23369 157 aa4.49□□□□□ -1.69
UBP6YFR010W PUF4P25339 888 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
UBP6YFR010W TFB1P32776 642 aa4.49□□□□□ -1.69
UBP6YFR010W NPL6P32832 435 aa4.49□□□□□ -1.69
UBP6YFR010W RPC37P36121 282 aa4.49□□□□□ -1.69
UBP6YFR010W VBA5P36172 582 aa4.49□□□□□ -1.69
UBP6YFR010W RDH54P38086 958 aa4.49□□□□□ -1.69
UBP6YFR010W OTU2P38747 307 aaKnown RBP4.49□□□□□ -1.69
UBP6YFR010W PCL7P40186 285 aa4.49□□□□□ -1.69
UBP6YFR010W AXL1P40851 1208 aa4.49□□□□□ -1.69
UBP6YFR010W LAM5P43560 674 aa4.49□□□□□ -1.69
UBP6YFR010W IRC6P43615 237 aa4.49□□□□□ -1.69
UBP6YFR010W YGL140CP53120 1219 aa4.49□□□□□ -1.69
UBP6YFR010W HST1P53685 503 aa4.49□□□□□ -1.69
UBP6YFR010W TAP42Q04372 366 aa4.49□□□□□ -1.69
UBP6YFR010W ARP9Q05123 467 aa4.49□□□□□ -1.69
UBP6YFR010W YMR084WA2P2R3 262 aa4.48□□□□□ -1.69
UBP6YFR010W PET111P08468 800 aa4.48□□□□□ -1.69
UBP6YFR010W SEC23P15303 768 aaKnown RBP4.48□□□□□ -1.69
UBP6YFR010W RPL5P26321 297 aaKnown RBP4.48□□□□□ -1.69
UBP6YFR010W CMK1P27466 446 aaKnown RBP4.48□□□□□ -1.69
UBP6YFR010W MUD2P36084 527 aaKnown RBP4.48□□□□□ -1.69
UBP6YFR010W PSY4P38193 441 aa4.48□□□□□ -1.69
UBP6YFR010W HSM3P38348 480 aa4.48□□□□□ -1.69
UBP6YFR010W DSS1P39112 969 aa4.48□□□□□ -1.69
UBP6YFR010W NOP16P40007 231 aaKnown RBP4.48□□□□□ -1.69
UBP6YFR010W TPA1P40032 644 aaKnown RBP4.48□□□□□ -1.69
UBP6YFR010W PIC2P40035 300 aa4.48□□□□□ -1.69
UBP6YFR010W SPO1P53541 631 aa4.48□□□□□ -1.69
UBP6YFR010W RAT1Q02792 1006 aaKnown RBP4.48□□□□□ -1.69
UBP6YFR010W PRP42Q03776 544 aaKnown RBP4.48□□□□□ -1.69
UBP6YFR010W TPP1Q03796 238 aa4.48□□□□□ -1.69
UBP6YFR010W SYF1Q04048 859 aaPredicted RBP4.48□□□□□ -1.69
UBP6YFR010W GSF2Q04697 403 aaKnown RBP4.48□□□□□ -1.69
UBP6YFR010W CIA1Q05583 330 aa4.48□□□□□ -1.69
UBP6YFR010W YDL073WQ07454 984 aa4.48□□□□□ -1.69
UBP6YFR010W CUE5Q08412 411 aaKnown RBP4.48□□□□□ -1.69
UBP6YFR010W PUS7Q08647 676 aaKnown RBP4.48□□□□□ -1.69
UBP6YFR010W TAH18Q12181 623 aa4.48□□□□□ -1.69
UBP6YFR010W MET8P15807 274 aa4.47□□□□□ -1.69
UBP6YFR010W AAC3P18238 307 aa4.47□□□□□ -1.69
UBP6YFR010W LYP1P32487 611 aa4.47□□□□□ -1.69
UBP6YFR010W PAH1P32567 862 aa4.47□□□□□ -1.69
UBP6YFR010W YHR131CP38835 850 aa4.47□□□□□ -1.69
UBP6YFR010W FUN12P39730 1002 aaKnown RBP4.47□□□□□ -1.69
UBP6YFR010W TIF4631P39935 952 aaKnown RBP4.47□□□□□ -1.69
UBP6YFR010W SIT1P39980 628 aa4.47□□□□□ -1.69
UBP6YFR010W TOK1P40310 691 aa4.47□□□□□ -1.69
UBP6YFR010W QRI7P43122 407 aa4.47□□□□□ -1.69
UBP6YFR010W YJL055WP47044 245 aa4.47□□□□□ -1.69
UBP6YFR010W MDE1P47095 244 aa4.47□□□□□ -1.69
UBP6YFR010W ENT3P47160 408 aa4.47□□□□□ -1.69
UBP6YFR010W GAD1Q04792 585 aa4.47□□□□□ -1.69
UBP6YFR010W RSA3Q05942 220 aaKnown RBP4.47□□□□□ -1.69
UBP6YFR010W TRE1Q08919 783 aa4.47□□□□□ -1.69
UBP6YFR010W ENT1Q12518 454 aa4.47□□□□□ -1.69
UBP6YFR010W SSM4P40318 1319 aa4.47□□□□□ -1.69
UBP6YFR010W SMY1P32364 656 aaKnown RBP4.46□□□□□ -1.69
UBP6YFR010W ABD1P32783 436 aaPredicted RBP4.46□□□□□ -1.69
UBP6YFR010W BYE1P36106 594 aa4.46□□□□□ -1.69
UBP6YFR010W ATG14P38270 344 aa4.46□□□□□ -1.69
UBP6YFR010W ETP1P38748 585 aaKnown RBP4.46□□□□□ -1.69
UBP6YFR010W PEX7P39108 375 aa4.46□□□□□ -1.69
UBP6YFR010W RAD26P40352 1085 aa4.46□□□□□ -1.69
UBP6YFR010W AIM20P40451 204 aa4.46□□□□□ -1.69
UBP6YFR010W ALR2P43553 858 aa4.46□□□□□ -1.69
UBP6YFR010W TIM10P87108 93 aa4.46□□□□□ -1.69
UBP6YFR010W SEC5P89102 971 aa4.46□□□□□ -1.69
UBP6YFR010W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.46□□□□□ -1.69not detected
UBP6YFR010W TIM50Q02776 476 aa4.46□□□□□ -1.69
UBP6YFR010W FDC1Q03034 503 aa4.46□□□□□ -1.69
UBP6YFR010W ATG38Q05789 226 aaKnown RBP4.46□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms