RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W KTR4P38131 464 aa5.69□□□□□ -1.5
DEG1YFL001W FAT1P38225 669 aa5.69□□□□□ -1.5
DEG1YFL001W TOS1P38288 455 aa5.69□□□□□ -1.5
DEG1YFL001W YJR039WP47107 1121 aa5.69□□□□□ -1.5
DEG1YFL001W RNR4P49723 345 aaKnown RBP5.69□□□□□ -1.5
DEG1YFL001W ECM38Q05902 660 aaPredicted RBP5.69□□□□□ -1.5
DEG1YFL001W SWI6P09959 803 aa5.68□□□□□ -1.5
DEG1YFL001W PFK1P16861 987 aaKnown RBP5.68□□□□□ -1.5
DEG1YFL001W SAF1P38352 637 aa5.68□□□□□ -1.5
DEG1YFL001W PTC7P38797 343 aa5.68□□□□□ -1.5
DEG1YFL001W YIL108WP40483 696 aaKnown RBP5.68□□□□□ -1.5
DEG1YFL001W GTS1P40956 396 aa5.68□□□□□ -1.5
DEG1YFL001W YGR012WP53206 393 aa5.68□□□□□ -1.5
DEG1YFL001W DUS1P53759 423 aaKnown RBP5.68□□□□□ -1.5
DEG1YFL001W SSL1Q04673 461 aaPredicted RBP5.68□□□□□ -1.5
DEG1YFL001W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
DEG1YFL001W MSS18P08593 268 aa5.67□□□□□ -1.5
DEG1YFL001W APA1P16550 321 aaKnown RBP5.67□□□□□ -1.5
DEG1YFL001W HCA4P20448 770 aaKnown RBP5.67□□□□□ -1.5
DEG1YFL001W POA1P38218 177 aa5.67□□□□□ -1.5
DEG1YFL001W SSZ1P38788 538 aaKnown RBP5.67□□□□□ -1.5
DEG1YFL001W ACA1P39970 489 aa5.67□□□□□ -1.5
DEG1YFL001W CTH1P47976 325 aa5.67□□□□□ -1.5
DEG1YFL001W ARP4P80428 489 aa5.67□□□□□ -1.5
DEG1YFL001W RSM24Q03976 319 aa5.67□□□□□ -1.5
DEG1YFL001W NSI1Q12457 570 aa5.67□□□□□ -1.5
DEG1YFL001W MSB1P21339 1137 aaKnown RBP5.66□□□□□ -1.5
DEG1YFL001W DBF20P32328 564 aa5.66□□□□□ -1.5
DEG1YFL001W EXO84P38261 753 aa5.66□□□□□ -1.5
DEG1YFL001W BEM4P39011 633 aa5.66□□□□□ -1.5
DEG1YFL001W ERP2P39704 215 aa5.66□□□□□ -1.5
DEG1YFL001W VID27P40157 782 aa5.66□□□□□ -1.5
DEG1YFL001W SAP185P40856 1058 aa5.66□□□□□ -1.5
DEG1YFL001W QRI7P43122 407 aa5.66□□□□□ -1.5
DEG1YFL001W BFA1P47113 574 aa5.66□□□□□ -1.5
DEG1YFL001W ATP12P22135 325 aa5.65□□□□□ -1.51
DEG1YFL001W MIP6P38760 659 aaKnown RBP5.65□□□□□ -1.51
DEG1YFL001W ZRG8P40021 1076 aa5.65□□□□□ -1.51
DEG1YFL001W BRE5P53741 515 aaKnown RBP5.65□□□□□ -1.51
DEG1YFL001W BRE4Q07660 1125 aa5.65□□□□□ -1.51
DEG1YFL001W HOP1P20050 605 aa5.64□□□□□ -1.51
DEG1YFL001W RPA135P22138 1203 aaKnown RBP5.64□□□□□ -1.51
DEG1YFL001W SSH4P32343 579 aa5.64□□□□□ -1.51
DEG1YFL001W CTF8P38877 133 aa5.64□□□□□ -1.51
DEG1YFL001W PSP2P50109 593 aaKnown RBP5.64□□□□□ -1.51
DEG1YFL001W HOL1P53389 586 aa5.64□□□□□ -1.51
DEG1YFL001W GPD1Q00055 391 aaKnown RBP5.64□□□□□ -1.51
DEG1YFL001W CEG1Q01159 459 aaPredicted RBP5.64□□□□□ -1.51
DEG1YFL001W SSY1Q03770 852 aa5.64□□□□□ -1.51
DEG1YFL001W COG4Q06096 861 aa5.64□□□□□ -1.51
DEG1YFL001W BRE1Q07457 700 aaKnown RBP5.64□□□□□ -1.51
DEG1YFL001W YOL114CQ12322 202 aa5.64□□□□□ -1.51
DEG1YFL001W TY1B-DR4Q07793 1604 aa5.63□□□□□ -1.51
DEG1YFL001W PHO81P17442 1178 aa5.63□□□□□ -1.51
DEG1YFL001W YKR075CP36155 307 aa5.63□□□□□ -1.51
DEG1YFL001W SSY5P47002 699 aa5.63□□□□□ -1.51
DEG1YFL001W SPE1P08432 466 aa5.62□□□□□ -1.51
DEG1YFL001W CHS2P14180 963 aa5.62□□□□□ -1.51
DEG1YFL001W CDC26P14724 124 aa5.62□□□□□ -1.51
DEG1YFL001W ADP1P25371 1049 aa5.62□□□□□ -1.51
DEG1YFL001W PET309P32522 965 aaPredicted RBP5.62□□□□□ -1.51
DEG1YFL001W ATG19P35193 415 aa5.62□□□□□ -1.51
DEG1YFL001W AKL1P38080 1108 aaKnown RBP5.62□□□□□ -1.51
DEG1YFL001W SDP1P40479 209 aa5.62□□□□□ -1.51
DEG1YFL001W VID28P40547 921 aa5.62□□□□□ -1.51
DEG1YFL001W MND2P40577 368 aa5.62□□□□□ -1.51
DEG1YFL001W NOP15P53927 220 aaPredicted RBP5.62□□□□□ -1.51
DEG1YFL001W YML131WQ03102 365 aa5.62□□□□□ -1.51
DEG1YFL001W GLN4P13188 809 aaKnown RBP5.61□□□□□ -1.51
DEG1YFL001W SRP68P38687 599 aaKnown RBP5.61□□□□□ -1.51
DEG1YFL001W YHR078WP38799 552 aa5.61□□□□□ -1.51
DEG1YFL001W RPT2P40327 437 aaKnown RBP5.61□□□□□ -1.51
DEG1YFL001W ASK10P48361 1146 aa5.61□□□□□ -1.51
DEG1YFL001W PUS4P48567 403 aaKnown RBP5.61□□□□□ -1.51
DEG1YFL001W YGR130CP53278 816 aa5.61□□□□□ -1.51
DEG1YFL001W LEE1Q02799 301 aaKnown RBP5.61□□□□□ -1.51
DEG1YFL001W HLR1Q04429 423 aa5.61□□□□□ -1.51
DEG1YFL001W YLR407WQ06070 228 aa5.61□□□□□ -1.51
DEG1YFL001W OMS1Q06668 471 aa5.61□□□□□ -1.51
DEG1YFL001W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
DEG1YFL001W GPR1Q12361 961 aa5.61□□□□□ -1.51
DEG1YFL001W LPX1Q12405 387 aaKnown RBP5.61□□□□□ -1.51
DEG1YFL001W SWR1Q05471 1514 aa5.61□□□□□ -1.51
DEG1YFL001W CMP2P14747 604 aa5.6□□□□□ -1.51
DEG1YFL001W MSM1P22438 575 aa5.6□□□□□ -1.51
DEG1YFL001W HXT4P32467 576 aa5.6□□□□□ -1.51
DEG1YFL001W YHR202WP38887 602 aa5.6□□□□□ -1.51
DEG1YFL001W UBP5P39944 805 aa5.6□□□□□ -1.51
DEG1YFL001W YIL092WP40497 633 aa5.6□□□□□ -1.51
DEG1YFL001W IES1P43579 692 aa5.6□□□□□ -1.51
DEG1YFL001W IRC5P43610 853 aa5.6□□□□□ -1.51
DEG1YFL001W SET2P46995 733 aaKnown RBP5.6□□□□□ -1.51
DEG1YFL001W NGL1Q08213 363 aaKnown RBP5.6□□□□□ -1.51
DEG1YFL001W CWC2Q12046 339 aaPredicted RBP5.6□□□□□ -1.51
DEG1YFL001W RPS17AP02407 136 aaKnown RBP5.59□□□□□ -1.51
DEG1YFL001W GCD1P09032 578 aaPredicted RBP5.59□□□□□ -1.51
DEG1YFL001W RPS17BP14127 136 aaKnown RBP5.59□□□□□ -1.51
DEG1YFL001W PHO3P24031 467 aa5.59□□□□□ -1.51
DEG1YFL001W RPN12P32496 274 aa5.59□□□□□ -1.51
DEG1YFL001W SAW1P39735 261 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 87.9 ms