RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W NGG1P32494 702 aa5.85□□□□□ -1.47
UBC6YER100W SDS22P36047 338 aa5.85□□□□□ -1.47
UBC6YER100W MIP6P38760 659 aaKnown RBP5.85□□□□□ -1.47
UBC6YER100W SAW1P39735 261 aa5.85□□□□□ -1.47
UBC6YER100W ENP2P48234 707 aaKnown RBP5.85□□□□□ -1.47
UBC6YER100W PUS2P53167 370 aa5.85□□□□□ -1.47
UBC6YER100W DUS1P53759 423 aaKnown RBP5.85□□□□□ -1.47
UBC6YER100W MDG1P53885 366 aa5.85□□□□□ -1.47
UBC6YER100W ARP4P80428 489 aa5.85□□□□□ -1.47
UBC6YER100W GPD1Q00055 391 aaKnown RBP5.85□□□□□ -1.47
UBC6YER100W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
UBC6YER100W BLS1Q06071 122 aa5.85□□□□□ -1.47
UBC6YER100W CDA1Q06702 301 aa5.85□□□□□ -1.47
UBC6YER100W YOL087CQ99247 1116 aa5.85□□□□□ -1.47
UBC6YER100W KIN2P13186 1147 aaKnown RBP5.84□□□□□ -1.47
UBC6YER100W PHO3P24031 467 aa5.84□□□□□ -1.47
UBC6YER100W MSH1P25846 959 aa5.84□□□□□ -1.47
UBC6YER100W MCM10P32354 571 aa5.84□□□□□ -1.47
UBC6YER100W YKR075CP36155 307 aa5.84□□□□□ -1.47
UBC6YER100W PSY4P38193 441 aa5.84□□□□□ -1.47
UBC6YER100W POA1P38218 177 aa5.84□□□□□ -1.47
UBC6YER100W PEX7P39108 375 aa5.84□□□□□ -1.47
UBC6YER100W SSP120P39931 234 aaKnown RBP5.84□□□□□ -1.47
UBC6YER100W STL1P39932 569 aa5.84□□□□□ -1.47
UBC6YER100W HOS4P40480 1083 aa5.84□□□□□ -1.47
UBC6YER100W IRC5P43610 853 aa5.84□□□□□ -1.47
UBC6YER100W SRB7P47822 140 aa5.84□□□□□ -1.47
UBC6YER100W ARI1P53111 347 aaKnown RBP5.84□□□□□ -1.47
UBC6YER100W BRE5P53741 515 aaKnown RBP5.84□□□□□ -1.47
UBC6YER100W GTR1Q00582 310 aa5.84□□□□□ -1.47
UBC6YER100W GAS5Q08193 484 aa5.84□□□□□ -1.47
UBC6YER100W CDC26P14724 124 aa5.83□□□□□ -1.48
UBC6YER100W ACO1P19414 778 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
UBC6YER100W SHM2P37291 469 aaKnown RBP5.83□□□□□ -1.48
UBC6YER100W AKL1P38080 1108 aaKnown RBP5.83□□□□□ -1.48
UBC6YER100W YIL108WP40483 696 aaKnown RBP5.83□□□□□ -1.48
UBC6YER100W YIL092WP40497 633 aa5.83□□□□□ -1.48
UBC6YER100W MNT3P40549 630 aa5.83□□□□□ -1.48
UBC6YER100W AIM21P40563 679 aa5.83□□□□□ -1.48
UBC6YER100W IES1P43579 692 aa5.83□□□□□ -1.48
UBC6YER100W UBA2P52488 636 aa5.83□□□□□ -1.48
UBC6YER100W YGR012WP53206 393 aa5.83□□□□□ -1.48
UBC6YER100W NOP15P53927 220 aaPredicted RBP5.83□□□□□ -1.48
UBC6YER100W MTD1Q02046 320 aaKnown RBP5.83□□□□□ -1.48
UBC6YER100W OMS1Q06668 471 aa5.83□□□□□ -1.48
UBC6YER100W PSF3Q12146 194 aa5.83□□□□□ -1.48
UBC6YER100W CLF1Q12309 687 aaPredicted RBP5.83□□□□□ -1.48
UBC6YER100W RIB2Q12362 591 aaKnown RBP5.83□□□□□ -1.48
UBC6YER100W RER1P25560 188 aa5.82□□□□□ -1.48
UBC6YER100W CHS3P29465 1165 aa5.82□□□□□ -1.48
UBC6YER100W MF(ALPHA)2P32435 120 aa5.82□□□□□ -1.48
UBC6YER100W RPD3P32561 433 aa5.82□□□□□ -1.48
UBC6YER100W BEM3P32873 1128 aa5.82□□□□□ -1.48
UBC6YER100W XRS2P33301 854 aa5.82□□□□□ -1.48
UBC6YER100W WHI3P34761 661 aaKnown RBP5.82□□□□□ -1.48
UBC6YER100W ATG19P35193 415 aa5.82□□□□□ -1.48
UBC6YER100W JNM1P36224 373 aa5.82□□□□□ -1.48
UBC6YER100W ABZ1P37254 787 aaPredicted RBP5.82□□□□□ -1.48
UBC6YER100W CTF8P38877 133 aa5.82□□□□□ -1.48
UBC6YER100W RAD26P40352 1085 aa5.82□□□□□ -1.48
UBC6YER100W VID28P40547 921 aa5.82□□□□□ -1.48
UBC6YER100W OYE3P41816 400 aaPredicted RBP5.82□□□□□ -1.48
UBC6YER100W ERR3P42222 437 aa5.82□□□□□ -1.48
UBC6YER100W SBE2P42223 864 aaKnown RBP5.82□□□□□ -1.48
UBC6YER100W RCM1P53972 490 aa5.82□□□□□ -1.48
UBC6YER100W EIS1Q05050 843 aaKnown RBP5.82□□□□□ -1.48
UBC6YER100W TRE1Q08919 783 aa5.82□□□□□ -1.48
UBC6YER100W CWC2Q12046 339 aaPredicted RBP5.82□□□□□ -1.48
UBC6YER100W NUR1Q12066 484 aa5.82□□□□□ -1.48
UBC6YER100W SSM4P40318 1319 aa5.81□□□□□ -1.48
UBC6YER100W SPS1P08458 490 aa5.81□□□□□ -1.48
UBC6YER100W GFA1P14742 717 aaKnown RBP5.81□□□□□ -1.48
UBC6YER100W SEC18P18759 758 aaKnown RBP5.81□□□□□ -1.48
UBC6YER100W APL1P27351 700 aa5.81□□□□□ -1.48
UBC6YER100W HXT4P32467 576 aa5.81□□□□□ -1.48
UBC6YER100W SRP101P32916 621 aa5.81□□□□□ -1.48
UBC6YER100W RRN3P36070 627 aa5.81□□□□□ -1.48
UBC6YER100W TMA108P40462 946 aa5.81□□□□□ -1.48
UBC6YER100W SSL1Q04673 461 aaPredicted RBP5.81□□□□□ -1.48
UBC6YER100W YLR407WQ06070 228 aa5.81□□□□□ -1.48
UBC6YER100W TSR2Q06672 205 aaKnown RBP5.81□□□□□ -1.48
UBC6YER100W NGL1Q08213 363 aaKnown RBP5.81□□□□□ -1.48
UBC6YER100W RPS17AP02407 136 aaKnown RBP5.8□□□□□ -1.48
UBC6YER100W CDC31P06704 161 aaKnown RBP5.8□□□□□ -1.48
UBC6YER100W GLN4P13188 809 aaKnown RBP5.8□□□□□ -1.48
UBC6YER100W RPS17BP14127 136 aaKnown RBP5.8□□□□□ -1.48
UBC6YER100W NFU1P32860 256 aa5.8□□□□□ -1.48
UBC6YER100W TGL1P34163 548 aa5.8□□□□□ -1.48
UBC6YER100W TAF5P38129 798 aa5.8□□□□□ -1.48
UBC6YER100W MCX1P38323 520 aaPredicted RBP5.8□□□□□ -1.48
UBC6YER100W GID8P40208 455 aa5.8□□□□□ -1.48
UBC6YER100W SET2P46995 733 aaKnown RBP5.8□□□□□ -1.48
UBC6YER100W PSP2P50109 593 aaKnown RBP5.8□□□□□ -1.48
UBC6YER100W RSM24Q03976 319 aa5.8□□□□□ -1.48
UBC6YER100W HPF1Q05164 967 aa5.8□□□□□ -1.48
UBC6YER100W HIM1Q06674 414 aa5.8□□□□□ -1.48
UBC6YER100W YDR056CQ12025 205 aa5.8□□□□□ -1.48
UBC6YER100W MED1Q12321 566 aa5.8□□□□□ -1.48
UBC6YER100W AI1P03875 834 aa5.79□□□□□ -1.48
UBC6YER100W MTF2P10849 440 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms