RNA–Protein interactions for RNA: YDR457W

TOM1, Transcript of E3 ubiquitin ligase of the hect-domain class, yeastyeast

Gene TOM1, Length 9,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOM1YDR457W GAL11P19659 1081 aa2.86□□□□□ -1.95
TOM1YDR457W ATG15P25641 520 aa2.86□□□□□ -1.95
TOM1YDR457W LSM1P47017 172 aaKnown RBP2.86□□□□□ -1.95
TOM1YDR457W SEC5P89102 971 aa2.86□□□□□ -1.95
TOM1YDR457W TGL5Q12043 749 aa2.86□□□□□ -1.95
TOM1YDR457W SGT2Q12118 346 aaKnown RBP2.86□□□□□ -1.95
TOM1YDR457W HEM2P05373 342 aa2.86□□□□□ -1.95
TOM1YDR457W NAM7P30771 971 aaKnown RBP2.86□□□□□ -1.95
TOM1YDR457W AFG2P32794 780 aa2.86□□□□□ -1.95
TOM1YDR457W YKL133CP36066 463 aa2.86□□□□□ -1.95
TOM1YDR457W TPS3P38426 1054 aaKnown RBP2.86□□□□□ -1.95
TOM1YDR457W YAP1801P38856 637 aa2.86□□□□□ -1.95
TOM1YDR457W GEM1P39722 662 aa2.86□□□□□ -1.95
TOM1YDR457W TDA1Q03533 586 aa2.86□□□□□ -1.95
TOM1YDR457W APM4Q99186 491 aa2.86□□□□□ -1.95
TOM1YDR457W YPT6Q99260 215 aa2.86□□□□□ -1.95
TOM1YDR457W CDC33P07260 213 aaKnown RBP2.86□□□□□ -1.95
TOM1YDR457W YGL041W-AP0C5N3 154 aa2.86□□□□□ -1.95
TOM1YDR457W RAD53P22216 821 aa2.86□□□□□ -1.95
TOM1YDR457W NTH1P32356 751 aa2.86□□□□□ -1.95
TOM1YDR457W ECM21P38167 1117 aaKnown RBP2.86□□□□□ -1.95
TOM1YDR457W SIF2P38262 535 aa2.86□□□□□ -1.95
TOM1YDR457W CIN4P39110 191 aa2.86□□□□□ -1.95
TOM1YDR457W IES5P40060 125 aa2.86□□□□□ -1.95
TOM1YDR457W DAK2P43550 591 aa2.86□□□□□ -1.95
TOM1YDR457W MRM2P53123 320 aa2.86□□□□□ -1.95
TOM1YDR457W YLR346CQ06139 101 aa2.86□□□□□ -1.95
TOM1YDR457W THI20Q08224 551 aa2.86□□□□□ -1.95
TOM1YDR457W NOB1Q08444 459 aaKnown RBP2.86□□□□□ -1.95
TOM1YDR457W TAH18Q12181 623 aa2.86□□□□□ -1.95
TOM1YDR457W NCA2Q12374 616 aa2.86□□□□□ -1.95
TOM1YDR457W MPD2Q99316 277 aa2.86□□□□□ -1.95
TOM1YDR457W RAD14P28519 371 aa2.86□□□□□ -1.95
TOM1YDR457W STN1P38960 494 aa2.86□□□□□ -1.95
TOM1YDR457W DRN1P53255 507 aaKnown RBP2.86□□□□□ -1.95
TOM1YDR457W GPN3Q06543 272 aa2.86□□□□□ -1.95
TOM1YDR457W RSA1Q08932 381 aa2.86□□□□□ -1.95
TOM1YDR457W YPL199CQ08954 240 aa2.86□□□□□ -1.95
TOM1YDR457W YBL113CQ7M4S9 792 aa2.86□□□□□ -1.95
TOM1YDR457W ABF1P14164 731 aa2.85□□□□□ -1.95
TOM1YDR457W SCJ1P25303 377 aa2.85□□□□□ -1.95
TOM1YDR457W RPT5P33297 434 aaKnown RBP2.85□□□□□ -1.95
TOM1YDR457W ASK1P35734 292 aa2.85□□□□□ -1.95
TOM1YDR457W HES1P35843 434 aa2.85□□□□□ -1.95
TOM1YDR457W UGA2P38067 497 aa2.85□□□□□ -1.95
TOM1YDR457W YFR018CP43599 363 aa2.85□□□□□ -1.95
TOM1YDR457W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
TOM1YDR457W CWC27Q02770 301 aa2.85□□□□□ -1.95
TOM1YDR457W EEB1Q02891 456 aa2.85□□□□□ -1.95
TOM1YDR457W CRF1Q04930 467 aa2.85□□□□□ -1.95
TOM1YDR457W APC5Q08683 685 aa2.85□□□□□ -1.95
TOM1YDR457W CLN3P13365 580 aa2.85□□□□□ -1.95
TOM1YDR457W SPS22P25380 463 aa2.85□□□□□ -1.95
TOM1YDR457W RPC25P35718 212 aa2.85□□□□□ -1.95
TOM1YDR457W KIC1P38692 1080 aa2.85□□□□□ -1.95
TOM1YDR457W NOP16P40007 231 aaKnown RBP2.85□□□□□ -1.95
TOM1YDR457W YNR063WP53749 607 aa2.85□□□□□ -1.95
TOM1YDR457W IBD2P53892 351 aa2.85□□□□□ -1.95
TOM1YDR457W GFA1P14742 717 aaKnown RBP2.85□□□□□ -1.95
TOM1YDR457W ASF2P32448 525 aaPredicted RBP2.85□□□□□ -1.95
TOM1YDR457W RIM2P38127 377 aa2.85□□□□□ -1.95
TOM1YDR457W HEK2P38199 381 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
TOM1YDR457W RSC4Q02206 625 aa2.85□□□□□ -1.95
TOM1YDR457W GRX3Q03835 250 aa2.85□□□□□ -1.95
TOM1YDR457W TAP42Q04372 366 aa2.85□□□□□ -1.95
TOM1YDR457W SPC2Q04969 178 aa2.85□□□□□ -1.95
TOM1YDR457W YIL002W-AQ3E7Z5 69 aa2.85□□□□□ -1.95
TOM1YDR457W MPH3P0CE00 602 aa2.85□□□□□ -1.95
TOM1YDR457W RPP1BP10622 106 aaKnown RBP2.85□□□□□ -1.95
TOM1YDR457W CKI1P20485 582 aa2.85□□□□□ -1.95
TOM1YDR457W PAP1P29468 568 aaKnown RBP2.85□□□□□ -1.95
TOM1YDR457W YME1P32795 747 aa2.85□□□□□ -1.95
TOM1YDR457W SPT21P35209 758 aa2.85□□□□□ -1.95
TOM1YDR457W GIC1P38785 314 aa2.85□□□□□ -1.95
TOM1YDR457W YMR134WP40207 237 aa2.85□□□□□ -1.95
TOM1YDR457W UBA2P52488 636 aa2.85□□□□□ -1.95
TOM1YDR457W SWC4P53201 476 aa2.85□□□□□ -1.95
TOM1YDR457W TFB2Q02939 513 aa2.85□□□□□ -1.95
TOM1YDR457W NEJ1Q06148 342 aa2.85□□□□□ -1.95
TOM1YDR457W NUS1Q12063 375 aa2.85□□□□□ -1.95
TOM1YDR457W PET494P07390 489 aaPredicted RBP2.85□□□□□ -1.95
TOM1YDR457W PRE8P23639 250 aa2.85□□□□□ -1.95
TOM1YDR457W GRX1P25373 110 aaKnown RBP2.85□□□□□ -1.95
TOM1YDR457W ICL1P28240 557 aaPredicted RBP2.85□□□□□ -1.95
TOM1YDR457W SEC21P32074 935 aaKnown RBP2.85□□□□□ -1.95
TOM1YDR457W TFB4Q12004 338 aa2.85□□□□□ -1.95
TOM1YDR457W MCD1Q12158 566 aa2.85□□□□□ -1.95
TOM1YDR457W BUD5P25300 642 aaPredicted RBP2.85□□□□□ -1.95
TOM1YDR457W GDH2P33327 1092 aaKnown RBP2.85□□□□□ -1.95
TOM1YDR457W ADD66P36040 267 aa2.85□□□□□ -1.95
TOM1YDR457W RSP5P39940 809 aaKnown RBP2.85□□□□□ -1.95
TOM1YDR457W RGI2P40188 164 aa2.85□□□□□ -1.95
TOM1YDR457W MTR3P48240 250 aaPredicted RBP2.85□□□□□ -1.95
TOM1YDR457W DSD1P53095 428 aa2.85□□□□□ -1.95
TOM1YDR457W GPI1P53306 609 aa2.85□□□□□ -1.95
TOM1YDR457W SQS1P53866 767 aaKnown RBP2.85□□□□□ -1.95
TOM1YDR457W NNT1Q05874 261 aa2.85□□□□□ -1.95
TOM1YDR457W THI22Q06490 572 aa2.85□□□□□ -1.95
TOM1YDR457W GYP1Q08484 637 aa2.85□□□□□ -1.95
TOM1YDR457W HAT1Q12341 374 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms