RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	SEC21	P32074	935 aa	Known RBP	7.77	□□□□□ -1.17
SKP1	YDR328C	CBF2	P32504	956 aa		7.77	□□□□□ -1.17
SKP1	YDR328C	GRS1	P38088	690 aa	Known RBP	7.77	□□□□□ -1.17
SKP1	YDR328C	BRL1	P38770	471 aa		7.77	□□□□□ -1.17
SKP1	YDR328C	DYS1	P38791	387 aa		7.77	□□□□□ -1.17
SKP1	YDR328C	SAH1	P39954	449 aa	Known RBP	7.77	□□□□□ -1.17
SKP1	YDR328C	PHO86	P46956	311 aa		7.77	□□□□□ -1.17
SKP1	YDR328C	DRN1	P53255	507 aa	Known RBP	7.77	□□□□□ -1.17
SKP1	YDR328C	YNL115C	P53925	644 aa		7.77	□□□□□ -1.17
SKP1	YDR328C	SNU56	Q03782	492 aa	Known RBP	7.77	□□□□□ -1.17
SKP1	YDR328C	PIB1	Q06651	286 aa		7.77	□□□□□ -1.17
SKP1	YDR328C	VAC14	Q06708	880 aa		7.77	□□□□□ -1.17
SKP1	YDR328C	YLR001C	Q07895	862 aa		7.77	□□□□□ -1.17
SKP1	YDR328C	YOR022C	Q12204	715 aa		7.77	□□□□□ -1.17
SKP1	YDR328C	PUS1	Q12211	544 aa	Known RBP	7.77	□□□□□ -1.17
SKP1	YDR328C	CTF3	Q12748	733 aa		7.77	□□□□□ -1.17
SKP1	YDR328C	GAL10	P04397	699 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	ERG11	P10614	530 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	CKI1	P20485	582 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	RSA4	P25382	515 aa	Known RBP	7.76	□□□□□ -1.17
SKP1	YDR328C	CYS3	P31373	394 aa	Known RBP	7.76	□□□□□ -1.17
SKP1	YDR328C	BIO2	P32451	375 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	BCH2	P36122	765 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	KAP123	P40069	1113 aa	Known RBP	7.76	□□□□□ -1.17
SKP1	YDR328C	YTA12	P40341	825 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	SBE2	P42223	864 aa	Known RBP	7.76	□□□□□ -1.17
SKP1	YDR328C	YFL040W	P43562	540 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	PUS2	P53167	370 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	BTN2	P53286	410 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	CWC21	Q03375	135 aa	Known RBP	7.76	□□□□□ -1.17
SKP1	YDR328C	CDD1	Q06549	142 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	MCM16	Q12262	181 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	UBR2	Q07963	1872 aa		7.76	□□□□□ -1.17
SKP1	YDR328C	STE11	P23561	717 aa		7.75	□□□□□ -1.17
SKP1	YDR328C	SRB4	P32569	687 aa		7.75	□□□□□ -1.17
SKP1	YDR328C	YKL050C	P35736	922 aa		7.75	□□□□□ -1.17
SKP1	YDR328C	BUD16	P39988	312 aa		7.75	□□□□□ -1.17
SKP1	YDR328C	SPO74	P45819	413 aa		7.75	□□□□□ -1.17
SKP1	YDR328C	ALT2	P52892	507 aa		7.75	□□□□□ -1.17
SKP1	YDR328C	ALT1	P52893	592 aa		7.75	□□□□□ -1.17
SKP1	YDR328C	EEB1	Q02891	456 aa		7.75	□□□□□ -1.17
SKP1	YDR328C	YMR018W	Q04364	514 aa		7.75	□□□□□ -1.17
SKP1	YDR328C	MAG2	Q06436	670 aa	Known RBP	7.75	□□□□□ -1.17
SKP1	YDR328C	DNL4	Q08387	944 aa	Predicted RBP	7.75	□□□□□ -1.17
SKP1	YDR328C	YPR027C	Q12079	277 aa		7.75	□□□□□ -1.17
SKP1	YDR328C	CHS1	P08004	1131 aa		7.74	□□□□□ -1.17
SKP1	YDR328C	PET111	P08468	800 aa		7.74	□□□□□ -1.17
SKP1	YDR328C	BLI1	P35727	113 aa		7.74	□□□□□ -1.17
SKP1	YDR328C	AVT3	P36062	692 aa		7.74	□□□□□ -1.17
SKP1	YDR328C	SLX1	P38324	304 aa		7.74	□□□□□ -1.17
SKP1	YDR328C	FIR1	P40020	876 aa		7.74	□□□□□ -1.17
SKP1	YDR328C	PSY2	P40164	858 aa		7.74	□□□□□ -1.17
SKP1	YDR328C	ESL1	P40456	1118 aa		7.74	□□□□□ -1.17
SKP1	YDR328C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	7.74	□□□□□ -1.17	not detected
SKP1	YDR328C	STB4	P50104	949 aa		7.74	□□□□□ -1.17
SKP1	YDR328C	FOL2	P51601	243 aa	Known RBP	7.74	□□□□□ -1.17
SKP1	YDR328C	KAP114	P53067	1004 aa		7.74	□□□□□ -1.17
SKP1	YDR328C	YDR222W	Q04925	415 aa		7.74	□□□□□ -1.17
SKP1	YDR328C	YER152C	P10356	443 aa		7.73	□□□□□ -1.17
SKP1	YDR328C	EST1	P17214	699 aa	Predicted RBP	7.73	□□□□□ -1.17
SKP1	YDR328C	CSE2	P33308	149 aa		7.73	□□□□□ -1.17
SKP1	YDR328C	YMC2	P38087	329 aa		7.73	□□□□□ -1.17
SKP1	YDR328C	AGP2	P38090	596 aa		7.73	□□□□□ -1.17
SKP1	YDR328C	NDC80	P40460	691 aa		7.73	□□□□□ -1.17
SKP1	YDR328C	YGR111W	P53265	400 aa		7.73	□□□□□ -1.17
SKP1	YDR328C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	7.73	□□□□□ -1.17	not detected
SKP1	YDR328C	DIG1	Q03063	452 aa	Known RBP	7.73	□□□□□ -1.17
SKP1	YDR328C	YLR455W	Q06188	304 aa		7.73	□□□□□ -1.17
SKP1	YDR328C	YLR422W	Q06409	1932 aa		7.73	□□□□□ -1.17
SKP1	YDR328C	BI2	P03873	423 aa		7.72	□□□□□ -1.17
SKP1	YDR328C	BI4	P03879	638 aa		7.72	□□□□□ -1.17
SKP1	YDR328C	DPB3	P27344	201 aa		7.72	□□□□□ -1.17
SKP1	YDR328C	RRN6	P32786	894 aa		7.72	□□□□□ -1.17
SKP1	YDR328C	WHI3	P34761	661 aa	Known RBP	7.72	□□□□□ -1.17
SKP1	YDR328C	HEL1	P36113	551 aa		7.72	□□□□□ -1.17
SKP1	YDR328C	RCK2	P38623	610 aa		7.72	□□□□□ -1.17
SKP1	YDR328C	CEP3	P40969	608 aa		7.72	□□□□□ -1.17
SKP1	YDR328C	POL31	P46957	487 aa		7.72	□□□□□ -1.17
SKP1	YDR328C	YGL036W	P53185	909 aa	Predicted RBP	7.72	□□□□□ -1.17
SKP1	YDR328C	HOS3	Q02959	697 aa	Known RBP	7.72	□□□□□ -1.17
SKP1	YDR328C	VPS60	Q03390	229 aa		7.72	□□□□□ -1.17
SKP1	YDR328C	POB3	Q04636	552 aa	Known RBP	7.72	□□□□□ -1.17
SKP1	YDR328C	ERV41	Q04651	352 aa		7.72	□□□□□ -1.17
SKP1	YDR328C	BI3	Q9ZZW7	517 aa		7.72	□□□□□ -1.17
SKP1	YDR328C	TPK1	P06244	397 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	CAD1	P24813	409 aa	Known RBP	7.71	□□□□□ -1.18
SKP1	YDR328C	EFB1	P32471	206 aa	Known RBP	7.71	□□□□□ -1.18
SKP1	YDR328C	YEL043W	P32618	956 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	MRP4	P32902	394 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	NOP4	P37838	685 aa	Known RBP	7.71	□□□□□ -1.18
SKP1	YDR328C	NCL1	P38205	684 aa	Known RBP	7.71	□□□□□ -1.18
SKP1	YDR328C	TDA3	P38758	523 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	SMF1	P38925	575 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	DSE1	P40077	573 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	MND1	P53102	219 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	HOP2	P53187	214 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	MAL13	P53338	473 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	STP1	Q00947	519 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	MZM1	Q03429	123 aa	Predicted RBP	7.71	□□□□□ -1.18
SKP1	YDR328C	RCR2	Q03446	210 aa	Known RBP	7.71	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms