RNA–Protein interactions for RNA: YDR207C

UME6, Transcript of Rpd3L histone deacetylase complex subunit, yeast

Gene UME6, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UME6	YDR207C	YEH2	Q07950	538 aa		11.24	□□□□□ -0.61
UME6	YDR207C	ATG29	Q12092	213 aa		11.24	□□□□□ -0.61
UME6	YDR207C	RPA190	P10964	1664 aa	Known RBP	11.24	□□□□□ -0.61
UME6	YDR207C	NUP192	P47054	1683 aa		11.24	□□□□□ -0.61
UME6	YDR207C	DAP2	P18962	818 aa		11.24	□□□□□ -0.61
UME6	YDR207C	SPS22	P25380	463 aa		11.24	□□□□□ -0.61
UME6	YDR207C	EFT1	P32324	842 aa	Known RBP	11.24	□□□□□ -0.61
UME6	YDR207C	AST1	P35183	429 aa		11.24	□□□□□ -0.61
UME6	YDR207C	RSM22	P36056	628 aa		11.24	□□□□□ -0.61
UME6	YDR207C	YHI9	P38765	294 aa		11.24	□□□□□ -0.61
UME6	YDR207C	MEF2	P39677	819 aa		11.24	□□□□□ -0.61
UME6	YDR207C	MEP1	P40260	492 aa		11.24	□□□□□ -0.61
UME6	YDR207C	TOF1	P53840	1238 aa		11.24	□□□□□ -0.61
UME6	YDR207C	DON1	Q05610	365 aa		11.24	□□□□□ -0.61
UME6	YDR207C	SIL1	Q08199	421 aa		11.24	□□□□□ -0.61
UME6	YDR207C	SGO1	Q08490	590 aa		11.24	□□□□□ -0.61
UME6	YDR207C	SPO21	Q12411	609 aa		11.24	□□□□□ -0.61
UME6	YDR207C	SEY1	Q99287	776 aa		11.24	□□□□□ -0.61
UME6	YDR207C	OPI1	P21957	404 aa		11.23	□□□□□ -0.61
UME6	YDR207C	SRB4	P32569	687 aa		11.23	□□□□□ -0.61
UME6	YDR207C	TPO5	P36029	618 aa		11.23	□□□□□ -0.61
UME6	YDR207C	DXO1	Q06349	442 aa		11.23	□□□□□ -0.61
UME6	YDR207C	RPS3	P05750	240 aa	Known RBP	11.23	□□□□□ -0.61
UME6	YDR207C	VHR2	P40041	505 aa		11.23	□□□□□ -0.61
UME6	YDR207C	NAF1	P53919	492 aa	Known RBP	11.23	□□□□□ -0.61
UME6	YDR207C	TAP42	Q04372	366 aa		11.23	□□□□□ -0.61
UME6	YDR207C	TMA46	Q12000	345 aa	Known RBP	11.23	□□□□□ -0.61
UME6	YDR207C	ARP6	Q12509	438 aa		11.23	□□□□□ -0.61
UME6	YDR207C	RPS19A	P07280	144 aa	Known RBP	11.22	□□□□□ -0.61
UME6	YDR207C	RPS19B	P07281	144 aa	Predicted RBP	11.22	□□□□□ -0.61
UME6	YDR207C	MPH2	P0CD99	609 aa		11.22	□□□□□ -0.61
UME6	YDR207C	PPH3	P32345	308 aa		11.22	□□□□□ -0.61
UME6	YDR207C	GEM1	P39722	662 aa		11.22	□□□□□ -0.61
UME6	YDR207C	YER186C	P40101	306 aa		11.22	□□□□□ -0.61
UME6	YDR207C	RBG2	P53295	368 aa	Known RBP	11.22	□□□□□ -0.61
UME6	YDR207C	SRT1	Q03175	343 aa		11.22	□□□□□ -0.61
UME6	YDR207C	VPS64	Q03944	604 aa		11.22	□□□□□ -0.61
UME6	YDR207C	RSC3	Q06639	885 aa		11.22	□□□□□ -0.61
UME6	YDR207C	HIM1	Q06674	414 aa		11.22	□□□□□ -0.61
UME6	YDR207C	DBP10	Q12389	995 aa	Known RBP	11.22	□□□□□ -0.61
UME6	YDR207C	VMA4	P22203	233 aa	Known RBP	11.22	□□□□□ -0.61
UME6	YDR207C	RAM2	P29703	316 aa		11.22	□□□□□ -0.61
UME6	YDR207C	SHQ1	P40486	507 aa	Predicted RBP	11.22	□□□□□ -0.61
UME6	YDR207C	HCR1	Q05775	265 aa	Known RBP	11.22	□□□□□ -0.61
UME6	YDR207C	RGC1	Q06108	1083 aa	Known RBP	11.22	□□□□□ -0.61
UME6	YDR207C	RPB2	P08518	1224 aa	Known RBP	11.21	□□□□□ -0.61
UME6	YDR207C	RPS6A	P0CX37	236 aa	Known RBP	11.21	□□□□□ -0.61
UME6	YDR207C	RPS6B	P0CX38	236 aa	Predicted RBP	11.21	□□□□□ -0.61
UME6	YDR207C	ACH1	P32316	526 aa		11.21	□□□□□ -0.61
UME6	YDR207C	YTA12	P40341	825 aa		11.21	□□□□□ -0.61
UME6	YDR207C	IMD3	P50095	523 aa	Known RBP	11.21	□□□□□ -0.61
UME6	YDR207C	LGE1	Q02796	332 aa	Known RBP	11.21	□□□□□ -0.61
UME6	YDR207C	GTB1	Q04924	702 aa		11.21	□□□□□ -0.61
UME6	YDR207C	TRM1	P15565	570 aa	Known RBP	11.2	□□□□□ -0.62
UME6	YDR207C	YGR122W	P53272	402 aa		11.2	□□□□□ -0.62
UME6	YDR207C	BSC5	P53755	489 aa		11.2	□□□□□ -0.62
UME6	YDR207C	RED1	P14291	827 aa		11.2	□□□□□ -0.62
UME6	YDR207C	YAK1	P14680	807 aa		11.2	□□□□□ -0.62
UME6	YDR207C	PFF1	P38244	976 aa		11.2	□□□□□ -0.62
UME6	YDR207C	SMC2	P38989	1170 aa	Known RBP	11.2	□□□□□ -0.62
UME6	YDR207C	CAB2	P40506	365 aa		11.2	□□□□□ -0.62
UME6	YDR207C	PEX21	P50091	288 aa		11.2	□□□□□ -0.62
UME6	YDR207C	VTI1	Q04338	217 aa		11.2	□□□□□ -0.62
UME6	YDR207C	YLR031W	Q07978	186 aa		11.2	□□□□□ -0.62
UME6	YDR207C	AFT2	Q08957	416 aa		11.2	□□□□□ -0.62
UME6	YDR207C	MNL2	Q12205	849 aa		11.2	□□□□□ -0.62
UME6	YDR207C	NCA2	Q12374	616 aa		11.2	□□□□□ -0.62
UME6	YDR207C	KAR1	P11927	433 aa		11.19	□□□□□ -0.62
UME6	YDR207C	RET1	P22276	1149 aa	Known RBP	11.19	□□□□□ -0.62
UME6	YDR207C	PKC1	P24583	1151 aa		11.19	□□□□□ -0.62
UME6	YDR207C	ADE17	P38009	592 aa	Known RBP	11.19	□□□□□ -0.62
UME6	YDR207C	RFT1	P38206	574 aa	Predicted RBP	11.19	□□□□□ -0.62
UME6	YDR207C	QDR2	P40474	542 aa		11.19	□□□□□ -0.62
UME6	YDR207C	SWP82	P43554	623 aa		11.19	□□□□□ -0.62
UME6	YDR207C	STB4	P50104	949 aa		11.19	□□□□□ -0.62
UME6	YDR207C	NOG1	Q02892	647 aa	Known RBP	11.19	□□□□□ -0.62
UME6	YDR207C	FCP1	Q03254	732 aa		11.19	□□□□□ -0.62
UME6	YDR207C	BRX1	Q08235	291 aa	Known RBP	11.19	□□□□□ -0.62
UME6	YDR207C	YDL109C	Q12103	647 aa		11.19	□□□□□ -0.62
UME6	YDR207C	MER1	P16523	270 aa		11.19	□□□□□ -0.62
UME6	YDR207C	PRR1	P28708	518 aa		11.19	□□□□□ -0.62
UME6	YDR207C	YKR078W	P36158	585 aa	Known RBP	11.19	□□□□□ -0.62
UME6	YDR207C	YJR039W	P47107	1121 aa		11.19	□□□□□ -0.62
UME6	YDR207C	GPI17	Q04080	534 aa		11.19	□□□□□ -0.62
UME6	YDR207C	YCS4	Q06156	1176 aa		11.19	□□□□□ -0.62
UME6	YDR207C	RTC5	Q12108	567 aa	Known RBP	11.19	□□□□□ -0.62
UME6	YDR207C	REB1	P21538	810 aa		11.18	□□□□□ -0.62
UME6	YDR207C	EUG1	P32474	517 aa		11.18	□□□□□ -0.62
UME6	YDR207C	MBP1	P39678	833 aa		11.18	□□□□□ -0.62
UME6	YDR207C	BOI2	P39969	1040 aa		11.18	□□□□□ -0.62
UME6	YDR207C	ALG5	P40350	334 aa		11.18	□□□□□ -0.62
UME6	YDR207C	YNL040W	P53960	456 aa	Predicted RBP	11.18	□□□□□ -0.62
UME6	YDR207C	TMA20	P89886	181 aa	Predicted RBP	11.18	□□□□□ -0.62
UME6	YDR207C	HER2	Q03557	464 aa		11.18	□□□□□ -0.62
UME6	YDR207C	URH1	Q04179	340 aa		11.18	□□□□□ -0.62
UME6	YDR207C	GFA1	P14742	717 aa	Known RBP	11.18	□□□□□ -0.62
UME6	YDR207C	SPO12	P17123	173 aa		11.18	□□□□□ -0.62
UME6	YDR207C	DBP3	P20447	523 aa	Known RBP	11.18	□□□□□ -0.62
UME6	YDR207C	YME1	P32795	747 aa		11.18	□□□□□ -0.62
UME6	YDR207C	SLX1	P38324	304 aa		11.18	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms