RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W ATF2P53296 535 aa4.4□□□□□ -1.71
TRS85YDR108W TBF1Q02457 562 aa4.4□□□□□ -1.71
TRS85YDR108W TAP42Q04372 366 aa4.4□□□□□ -1.71
TRS85YDR108W VAC14Q06708 880 aa4.4□□□□□ -1.71
TRS85YDR108W HAT1Q12341 374 aa4.4□□□□□ -1.71
TRS85YDR108W PDR12Q02785 1511 aa4.4□□□□□ -1.71
TRS85YDR108W CPA2P03965 1118 aaKnown RBP4.39□□□□□ -1.71
TRS85YDR108W SNA3P14359 133 aa4.39□□□□□ -1.71
TRS85YDR108W CLB2P24869 491 aa4.39□□□□□ -1.71
TRS85YDR108W MVD1P32377 396 aaKnown RBP4.39□□□□□ -1.71
TRS85YDR108W GYP6P32806 458 aa4.39□□□□□ -1.71
TRS85YDR108W BLI1P35727 113 aa4.39□□□□□ -1.71
TRS85YDR108W VPS21P36017 210 aaKnown RBP4.39□□□□□ -1.71
TRS85YDR108W RCN1P36054 211 aa4.39□□□□□ -1.71
TRS85YDR108W VPS51P36116 164 aa4.39□□□□□ -1.71
TRS85YDR108W JNM1P36224 373 aa4.39□□□□□ -1.71
TRS85YDR108W RPN10P38886 268 aaKnown RBP4.39□□□□□ -1.71
TRS85YDR108W IPL1P38991 367 aa4.39□□□□□ -1.71
TRS85YDR108W CCC2P38995 1004 aa4.39□□□□□ -1.71
TRS85YDR108W YER034WP40022 185 aaKnown RBP4.39□□□□□ -1.71
TRS85YDR108W POL31P46957 487 aa4.39□□□□□ -1.71
TRS85YDR108W NNF1P47149 201 aa4.39□□□□□ -1.71
TRS85YDR108W RFX1P48743 811 aa4.39□□□□□ -1.71
TRS85YDR108W MDR1P53258 950 aa4.39□□□□□ -1.71
TRS85YDR108W FYV6P53913 173 aa4.39□□□□□ -1.71
TRS85YDR108W RPM2Q02773 1202 aa4.39□□□□□ -1.71
TRS85YDR108W MMT1Q03218 510 aa4.39□□□□□ -1.71
TRS85YDR108W COX20Q04935 205 aa4.39□□□□□ -1.71
TRS85YDR108W SVF1Q05515 481 aa4.39□□□□□ -1.71
TRS85YDR108W VPS36Q06696 566 aa4.39□□□□□ -1.71
TRS85YDR108W RRP6Q12149 733 aaKnown RBP4.39□□□□□ -1.71
TRS85YDR108W MED4Q12343 284 aa4.39□□□□□ -1.71
TRS85YDR108W LTE1P07866 1435 aa4.39□□□□□ -1.71
TRS85YDR108W ILS1P09436 1072 aaKnown RBP4.39□□□□□ -1.71
TRS85YDR108W TY2B-LR1P0C2J3 1770 aa4.39□□□□□ -1.71
TRS85YDR108W TY2B-FP0CX63 1770 aa4.39□□□□□ -1.71
TRS85YDR108W TY2B-GR2P0CX64 1770 aa4.39□□□□□ -1.71
TRS85YDR108W PHO13P19881 312 aa4.39□□□□□ -1.71
TRS85YDR108W TY2B-CP25384 1770 aa4.39□□□□□ -1.71
TRS85YDR108W RSM22P36056 628 aa4.39□□□□□ -1.71
TRS85YDR108W ATP3P38077 311 aaKnown RBP4.39□□□□□ -1.71
TRS85YDR108W DYS1P38791 387 aa4.39□□□□□ -1.71
TRS85YDR108W LAM4P38800 1345 aa4.39□□□□□ -1.71
TRS85YDR108W PMC1P38929 1173 aaPredicted RBP4.39□□□□□ -1.71
TRS85YDR108W TIF4631P39935 952 aaKnown RBP4.39□□□□□ -1.71
TRS85YDR108W ULP2P40537 1034 aaPredicted RBP4.39□□□□□ -1.71
TRS85YDR108W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
TRS85YDR108W YFL066CP43538 392 aa4.39□□□□□ -1.71
TRS85YDR108W FAR7P43592 221 aa4.39□□□□□ -1.71
TRS85YDR108W YJR054WP47114 497 aa4.39□□□□□ -1.71
TRS85YDR108W ATP22P50273 684 aaPredicted RBP4.39□□□□□ -1.71
TRS85YDR108W YNL108CP53929 270 aa4.39□□□□□ -1.71
TRS85YDR108W VPS16Q03308 798 aa4.39□□□□□ -1.71
TRS85YDR108W TY2B-DR2Q03494 1770 aa4.39□□□□□ -1.71
TRS85YDR108W USA1Q03714 838 aa4.39□□□□□ -1.71
TRS85YDR108W TY1B-DR1Q03855 1755 aa4.39□□□□□ -1.71
TRS85YDR108W ARP9Q05123 467 aa4.39□□□□□ -1.71
TRS85YDR108W ARV1Q06541 321 aa4.39□□□□□ -1.71
TRS85YDR108W TY2B-DR3Q07791 1770 aaKnown RBP4.39□□□□□ -1.71
TRS85YDR108W TY2B-OR1Q12113 1770 aa4.39□□□□□ -1.71
TRS85YDR108W TY2B-DR1Q12472 1770 aa4.39□□□□□ -1.71
TRS85YDR108W TY2B-BQ12491 1770 aa4.39□□□□□ -1.71
TRS85YDR108W TY2B-OR2Q12501 1770 aa4.39□□□□□ -1.71
TRS85YDR108W TY1B-DR3Q99231 1755 aa4.39□□□□□ -1.71
TRS85YDR108W RPS3P05750 240 aaKnown RBP4.38□□□□□ -1.71
TRS85YDR108W SPS1P08458 490 aa4.38□□□□□ -1.71
TRS85YDR108W TIF1P10081 395 aaKnown RBP4.38□□□□□ -1.71
TRS85YDR108W CKI1P20485 582 aa4.38□□□□□ -1.71
TRS85YDR108W PWP1P21304 576 aaKnown RBP4.38□□□□□ -1.71
TRS85YDR108W MSB1P21339 1137 aaKnown RBP4.38□□□□□ -1.71
TRS85YDR108W PPH3P32345 308 aa4.38□□□□□ -1.71
TRS85YDR108W HXT3P32466 567 aaKnown RBP4.38□□□□□ -1.71
TRS85YDR108W VMA8P32610 256 aaKnown RBP4.38□□□□□ -1.71
TRS85YDR108W YKR015CP36111 568 aa4.38□□□□□ -1.71
TRS85YDR108W SWC5P38326 303 aa4.38□□□□□ -1.71
TRS85YDR108W MEF2P39677 819 aa4.38□□□□□ -1.71
TRS85YDR108W MEP1P40260 492 aa4.38□□□□□ -1.71
TRS85YDR108W SNZ3P43545 298 aa4.38□□□□□ -1.71
TRS85YDR108W ALT1P52893 592 aa4.38□□□□□ -1.71
TRS85YDR108W KAP114P53067 1004 aa4.38□□□□□ -1.71
TRS85YDR108W ATG1P53104 897 aa4.38□□□□□ -1.71
TRS85YDR108W EFM5P53200 248 aaKnown RBP4.38□□□□□ -1.71
TRS85YDR108W SNZ2P53824 298 aa4.38□□□□□ -1.71
TRS85YDR108W CWC25P53854 179 aaKnown RBP4.38□□□□□ -1.71
TRS85YDR108W FDC1Q03034 503 aa4.38□□□□□ -1.71
TRS85YDR108W YDR179W-AQ03983 463 aa4.38□□□□□ -1.71
TRS85YDR108W RSC3Q06639 885 aa4.38□□□□□ -1.71
TRS85YDR108W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
TRS85YDR108W SMC5Q08204 1093 aa4.38□□□□□ -1.71
TRS85YDR108W RPN8Q08723 338 aaKnown RBP4.38□□□□□ -1.71
TRS85YDR108W TAF10Q12030 206 aa4.38□□□□□ -1.71
TRS85YDR108W NTE1Q04958 1679 aa4.38□□□□□ -1.71
TRS85YDR108W MDS3P53094 1487 aa4.38□□□□□ -1.71
TRS85YDR108W ARG4P04076 463 aaPredicted RBP4.37□□□□□ -1.71
TRS85YDR108W CMD1P06787 147 aaKnown RBP4.37□□□□□ -1.71
TRS85YDR108W SSB1P11484 613 aaKnown RBP4.37□□□□□ -1.71
TRS85YDR108W KAR1P11927 433 aa4.37□□□□□ -1.71
TRS85YDR108W KIN2P13186 1147 aaKnown RBP4.37□□□□□ -1.71
TRS85YDR108W MER1P16523 270 aa4.37□□□□□ -1.71
TRS85YDR108W TEC1P18412 486 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms