RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C GCD7P32502 381 aaPredicted RBP1.15□□□□□ -2.23
VAM6YDL077C NUF2P33895 451 aa1.15□□□□□ -2.23
VAM6YDL077C MYO3P36006 1272 aa1.15□□□□□ -2.23
VAM6YDL077C YKT6P36015 200 aaKnown RBP1.15□□□□□ -2.23
VAM6YDL077C RSM22P36056 628 aa1.15□□□□□ -2.23
VAM6YDL077C CCL1P37366 393 aa1.15□□□□□ -2.23
VAM6YDL077C RIM11P38615 370 aa1.15□□□□□ -2.23
VAM6YDL077C OSH3P38713 996 aaKnown RBP1.15□□□□□ -2.23
VAM6YDL077C SSZ1P38788 538 aaKnown RBP1.15□□□□□ -2.23
VAM6YDL077C GGA2P38817 585 aaKnown RBP1.15□□□□□ -2.23
VAM6YDL077C MTW1P39731 289 aa1.15□□□□□ -2.23
VAM6YDL077C MRX1P40050 688 aa1.15□□□□□ -2.23
VAM6YDL077C ALD4P46367 519 aaKnown RBP1.15□□□□□ -2.23
VAM6YDL077C STB2P46679 850 aa1.15□□□□□ -2.23
VAM6YDL077C AVT1P47082 602 aa1.15□□□□□ -2.23
VAM6YDL077C URB2P47108 1174 aa1.15□□□□□ -2.23
VAM6YDL077C YJR079WP47126 109 aa1.15□□□□□ -2.23
VAM6YDL077C YKE2P52553 114 aa1.15□□□□□ -2.23
VAM6YDL077C IMA1P53051 589 aa1.15□□□□□ -2.23
VAM6YDL077C EFM5P53200 248 aaKnown RBP1.15□□□□□ -2.23
VAM6YDL077C CWC24P53769 259 aa1.15□□□□□ -2.23
VAM6YDL077C VPS75P53853 264 aa1.15□□□□□ -2.23
VAM6YDL077C ESBP6P53918 673 aa1.15□□□□□ -2.23
VAM6YDL077C HPC2Q01448 625 aa1.15□□□□□ -2.23
VAM6YDL077C NSE5Q03718 556 aa1.15□□□□□ -2.23
VAM6YDL077C GIR2Q03768 265 aaPredicted RBP1.15□□□□□ -2.23
VAM6YDL077C YLR257WQ06146 321 aaKnown RBP1.15□□□□□ -2.23
VAM6YDL077C BUD21Q08492 214 aaPredicted RBP1.15□□□□□ -2.23
VAM6YDL077C SSP2Q08646 371 aa1.15□□□□□ -2.23
VAM6YDL077C ATG29Q12092 213 aa1.15□□□□□ -2.23
VAM6YDL077C SPO21Q12411 609 aa1.15□□□□□ -2.23
VAM6YDL077C RTP1Q12751 981 aa1.15□□□□□ -2.23
VAM6YDL077C TY1B-AO13527 1196 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C IPP1P00817 287 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C MCM1P11746 286 aa1.14□□□□□ -2.23
VAM6YDL077C CKA2P19454 339 aa1.14□□□□□ -2.23
VAM6YDL077C UBC1P21734 215 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C CLB3P24870 427 aa1.14□□□□□ -2.23
VAM6YDL077C PRD1P25375 712 aa1.14□□□□□ -2.23
VAM6YDL077C RPC53P25441 422 aa1.14□□□□□ -2.23
VAM6YDL077C YCR016WP25617 290 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C PAP1P29468 568 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C SIN4P32259 974 aa1.14□□□□□ -2.23
VAM6YDL077C SSE1P32589 693 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C GCG1P32656 232 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C TFC4P33339 1025 aa1.14□□□□□ -2.23
VAM6YDL077C LRG1P35688 1017 aa1.14□□□□□ -2.23
VAM6YDL077C OCT1P35999 772 aa1.14□□□□□ -2.23
VAM6YDL077C SPC42P36094 363 aa1.14□□□□□ -2.23
VAM6YDL077C HEL1P36113 551 aa1.14□□□□□ -2.23
VAM6YDL077C YKR018CP36114 725 aa1.14□□□□□ -2.23
VAM6YDL077C SPP381P38282 291 aaPredicted RBP1.14□□□□□ -2.23
VAM6YDL077C POP7P38291 140 aa1.14□□□□□ -2.23
VAM6YDL077C FZO1P38297 855 aa1.14□□□□□ -2.23
VAM6YDL077C SIP3P38717 1229 aa1.14□□□□□ -2.23
VAM6YDL077C YLF2P38746 405 aa1.14□□□□□ -2.23
VAM6YDL077C OTU2P38747 307 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C CCT6P39079 546 aa1.14□□□□□ -2.23
VAM6YDL077C ERP2P39704 215 aa1.14□□□□□ -2.23
VAM6YDL077C BIM1P40013 344 aa1.14□□□□□ -2.23
VAM6YDL077C ZRG8P40021 1076 aa1.14□□□□□ -2.23
VAM6YDL077C YER156CP40093 338 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C AXL1P40851 1208 aa1.14□□□□□ -2.23
VAM6YDL077C APL6P46682 809 aa1.14□□□□□ -2.23
VAM6YDL077C VMA10P48836 114 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C IMD4P50094 524 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C ATG1P53104 897 aa1.14□□□□□ -2.23
VAM6YDL077C SOL4P53315 255 aa1.14□□□□□ -2.23
VAM6YDL077C TMA20P89886 181 aaPredicted RBP1.14□□□□□ -2.23
VAM6YDL077C CEG1Q01159 459 aaPredicted RBP1.14□□□□□ -2.23
VAM6YDL077C TIM50Q02776 476 aa1.14□□□□□ -2.23
VAM6YDL077C RMD1Q03441 430 aa1.14□□□□□ -2.23
VAM6YDL077C TMA64Q04600 565 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C GTB1Q04924 702 aa1.14□□□□□ -2.23
VAM6YDL077C VPS36Q06696 566 aa1.14□□□□□ -2.23
VAM6YDL077C ADY3Q07732 790 aa1.14□□□□□ -2.23
VAM6YDL077C TLG2Q08144 397 aa1.14□□□□□ -2.23
VAM6YDL077C VHS3Q08438 674 aa1.14□□□□□ -2.23
VAM6YDL077C PUS7Q08647 676 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C RRI2Q12348 645 aa1.14□□□□□ -2.23
VAM6YDL077C SNU66Q12420 587 aaPredicted RBP1.14□□□□□ -2.23
VAM6YDL077C OCA6Q12454 224 aa1.14□□□□□ -2.23
VAM6YDL077C NSI1Q12457 570 aa1.14□□□□□ -2.23
VAM6YDL077C CMC2Q3E7A4 109 aa1.14□□□□□ -2.23
VAM6YDL077C CDC8P00572 216 aa1.14□□□□□ -2.23
VAM6YDL077C SIR3P06701 978 aa1.14□□□□□ -2.23
VAM6YDL077C LEU1P07264 779 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C TUB1P09733 447 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C RPL19AP0CX82 189 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C RPL19BP0CX83 189 aaPredicted RBP1.14□□□□□ -2.23
VAM6YDL077C KAR1P11927 433 aa1.14□□□□□ -2.23
VAM6YDL077C KIN1P13185 1064 aa1.14□□□□□ -2.23
VAM6YDL077C HOM2P13663 365 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C RGP1P16664 663 aa1.14□□□□□ -2.23
VAM6YDL077C IME1P21190 360 aa1.14□□□□□ -2.23
VAM6YDL077C CLB2P24869 491 aa1.14□□□□□ -2.23
VAM6YDL077C PTP1P25044 335 aa1.14□□□□□ -2.23
VAM6YDL077C YCR051WP25631 222 aa1.14□□□□□ -2.23
VAM6YDL077C SEC8P32855 1065 aa1.14□□□□□ -2.23
VAM6YDL077C AFR1P33304 620 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms