RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W PAM1P37304 830 aaKnown RBP8.38□□□□□ -1.07
ABP1YCR088W GTT3P39996 337 aa8.38□□□□□ -1.07
ABP1YCR088W MKT1P40850 830 aaKnown RBP8.38□□□□□ -1.07
ABP1YCR088W TRM44Q02648 567 aaKnown RBP8.38□□□□□ -1.07
ABP1YCR088W SHR3Q02774 210 aa8.38□□□□□ -1.07
ABP1YCR088W PRP3Q03338 469 aaPredicted RBP8.38□□□□□ -1.07
ABP1YCR088W YML002WP0CF17 737 aa8.38□□□□□ -1.07
ABP1YCR088W STE13P33894 931 aa8.38□□□□□ -1.07
ABP1YCR088W YMR134WP40207 237 aa8.38□□□□□ -1.07
ABP1YCR088W EMW1P42842 904 aaKnown RBP8.38□□□□□ -1.07
ABP1YCR088W UBX4P54730 416 aa8.38□□□□□ -1.07
ABP1YCR088W RPL22BP56628 122 aaKnown RBP8.38□□□□□ -1.07
ABP1YCR088W CEF1Q03654 590 aaPredicted RBP8.38□□□□□ -1.07
ABP1YCR088W SHE9Q04172 456 aa8.38□□□□□ -1.07
ABP1YCR088W LCB5Q06147 687 aaKnown RBP8.38□□□□□ -1.07
ABP1YCR088W TDA5Q06417 326 aaKnown RBP8.38□□□□□ -1.07
ABP1YCR088W CDC53Q12018 815 aaKnown RBP8.38□□□□□ -1.07
ABP1YCR088W GNT1Q12096 491 aa8.38□□□□□ -1.07
ABP1YCR088W RRD2Q12461 358 aa8.38□□□□□ -1.07
ABP1YCR088W TCP1P12612 559 aaKnown RBP8.37□□□□□ -1.07
ABP1YCR088W TPS2P31688 896 aaKnown RBP8.37□□□□□ -1.07
ABP1YCR088W TGL1P34163 548 aa8.37□□□□□ -1.07
ABP1YCR088W SHP1P34223 423 aa8.37□□□□□ -1.07
ABP1YCR088W RPC37P36121 282 aa8.37□□□□□ -1.07
ABP1YCR088W MRX3P38172 270 aa8.37□□□□□ -1.07
ABP1YCR088W REV7P38927 245 aa8.37□□□□□ -1.07
ABP1YCR088W RIO2P40160 425 aaKnown RBP8.37□□□□□ -1.07
ABP1YCR088W CPR7P47103 393 aa8.37□□□□□ -1.07
ABP1YCR088W MDR1P53258 950 aa8.37□□□□□ -1.07
ABP1YCR088W NOG2P53742 486 aaKnown RBP8.37□□□□□ -1.07
ABP1YCR088W CRF1Q04930 467 aa8.37□□□□□ -1.07
ABP1YCR088W CTT1P06115 562 aa8.36□□□□□ -1.07
ABP1YCR088W CMD1P06787 147 aaKnown RBP8.36□□□□□ -1.07
ABP1YCR088W FZO1P38297 855 aa8.36□□□□□ -1.07
ABP1YCR088W ALA1P40825 983 aaKnown RBP8.36□□□□□ -1.07
ABP1YCR088W AXL1P40851 1208 aa8.36□□□□□ -1.07
ABP1YCR088W TFG1P41895 735 aaPredicted RBP8.36□□□□□ -1.07
ABP1YCR088W RPA49Q01080 415 aaPredicted RBP8.36□□□□□ -1.07
ABP1YCR088W YML037CQ03703 340 aa8.36□□□□□ -1.07
ABP1YCR088W PPM1Q04081 328 aa8.36□□□□□ -1.07
ABP1YCR088W RGA2Q06407 1009 aa8.36□□□□□ -1.07
ABP1YCR088W PUF3Q07807 879 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
ABP1YCR088W ERG12P07277 443 aa8.35□□□□□ -1.07
ABP1YCR088W SFL1P20134 766 aa8.35□□□□□ -1.07
ABP1YCR088W RNR1P21524 888 aaKnown RBP8.35□□□□□ -1.07
ABP1YCR088W SSD1P24276 1250 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
ABP1YCR088W EFB1P32471 206 aaKnown RBP8.35□□□□□ -1.07
ABP1YCR088W PIN4P34217 668 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
ABP1YCR088W CSG2P35206 410 aa8.35□□□□□ -1.07
ABP1YCR088W CCL1P37366 393 aa8.35□□□□□ -1.07
ABP1YCR088W OAF1P39720 1047 aaPredicted RBP8.35□□□□□ -1.07
ABP1YCR088W ACA1P39970 489 aa8.35□□□□□ -1.07
ABP1YCR088W UBP6P43593 499 aaKnown RBP8.35□□□□□ -1.07
ABP1YCR088W PHO86P46956 311 aa8.35□□□□□ -1.07
ABP1YCR088W HSH155P49955 971 aaKnown RBP8.35□□□□□ -1.07
ABP1YCR088W TBF1Q02457 562 aa8.35□□□□□ -1.07
ABP1YCR088W NOC3Q07896 663 aaPredicted RBP8.35□□□□□ -1.07
ABP1YCR088W RAD3P06839 778 aa8.35□□□□□ -1.07
ABP1YCR088W CDC42P19073 191 aa8.35□□□□□ -1.07
ABP1YCR088W AEP2P22136 580 aa8.35□□□□□ -1.07
ABP1YCR088W SEC14P24280 304 aaKnown RBP8.35□□□□□ -1.07
ABP1YCR088W SCJ1P25303 377 aa8.35□□□□□ -1.07
ABP1YCR088W CDC48P25694 835 aaKnown RBP8.35□□□□□ -1.07
ABP1YCR088W MGT1P26188 188 aa8.35□□□□□ -1.07
ABP1YCR088W GYP6P32806 458 aa8.35□□□□□ -1.07
ABP1YCR088W TRM2P33753 639 aa8.35□□□□□ -1.07
ABP1YCR088W DUG2P38149 878 aa8.35□□□□□ -1.07
ABP1YCR088W ERP5P38819 212 aa8.35□□□□□ -1.07
ABP1YCR088W SHC1P39000 512 aa8.35□□□□□ -1.07
ABP1YCR088W SEC26P41810 973 aaKnown RBP8.35□□□□□ -1.07
ABP1YCR088W HUL5P53119 910 aa8.35□□□□□ -1.07
ABP1YCR088W PTA1Q01329 785 aaPredicted RBP8.35□□□□□ -1.07
ABP1YCR088W CUS1Q02554 436 aaPredicted RBP8.35□□□□□ -1.07
ABP1YCR088W DUS3Q06053 668 aaKnown RBP8.35□□□□□ -1.07
ABP1YCR088W BI2P03873 423 aa8.34□□□□□ -1.07
ABP1YCR088W BI4P03879 638 aa8.34□□□□□ -1.07
ABP1YCR088W CBP1P07252 654 aa8.34□□□□□ -1.07
ABP1YCR088W ATG19P35193 415 aa8.34□□□□□ -1.07
ABP1YCR088W VPS53P47061 822 aa8.34□□□□□ -1.07
ABP1YCR088W NNF2P53253 936 aa8.34□□□□□ -1.07
ABP1YCR088W YMR027WQ04371 470 aa8.34□□□□□ -1.07
ABP1YCR088W TY4A-HQ6Q5P6 413 aa8.34□□□□□ -1.07
ABP1YCR088W BI3Q9ZZW7 517 aa8.34□□□□□ -1.07
ABP1YCR088W HPR1P17629 752 aaKnown RBP8.33□□□□□ -1.08
ABP1YCR088W POP4P38336 279 aa8.33□□□□□ -1.08
ABP1YCR088W HSM3P38348 480 aa8.33□□□□□ -1.08
ABP1YCR088W STN1P38960 494 aa8.33□□□□□ -1.08
ABP1YCR088W ALY2P47029 1046 aa8.33□□□□□ -1.08
ABP1YCR088W PCL10P53124 433 aa8.33□□□□□ -1.08
ABP1YCR088W SPH1Q06160 661 aa8.33□□□□□ -1.08
ABP1YCR088W FBP1P09201 348 aa8.33□□□□□ -1.08
ABP1YCR088W VMA4P22203 233 aaKnown RBP8.33□□□□□ -1.08
ABP1YCR088W SWI3P32591 825 aa8.33□□□□□ -1.08
ABP1YCR088W TMN3P40071 706 aa8.33□□□□□ -1.08
ABP1YCR088W YER156CP40093 338 aaKnown RBP8.33□□□□□ -1.08
ABP1YCR088W PFK26P40433 827 aaKnown RBP8.33□□□□□ -1.08
ABP1YCR088W NIT1P40447 199 aa8.33□□□□□ -1.08
ABP1YCR088W SUM1P46676 1062 aa8.33□□□□□ -1.08
ABP1YCR088W ERP6P53198 216 aa8.33□□□□□ -1.08
ABP1YCR088W YNL144CP53907 740 aa8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms