RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W PGM2P37012 569 aaKnown RBP6.94□□□□□ -1.3
LDB16YCL005W YHR219WP38900 624 aa6.94□□□□□ -1.3
LDB16YCL005W UBP5P39944 805 aa6.94□□□□□ -1.3
LDB16YCL005W SHQ1P40486 507 aaPredicted RBP6.94□□□□□ -1.3
LDB16YCL005W ARK1P53974 638 aa6.94□□□□□ -1.3
LDB16YCL005W VPS60Q03390 229 aa6.94□□□□□ -1.3
LDB16YCL005W SMC5Q08204 1093 aa6.94□□□□□ -1.3
LDB16YCL005W TY3A-GQ12173 290 aa6.94□□□□□ -1.3
LDB16YCL005W TY3A-IQ99219 290 aa6.94□□□□□ -1.3
LDB16YCL005W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
LDB16YCL005W PPR1P07272 904 aaPredicted RBP6.93□□□□□ -1.3
LDB16YCL005W YSC83P32792 385 aa6.93□□□□□ -1.3
LDB16YCL005W XRS2P33301 854 aa6.93□□□□□ -1.3
LDB16YCL005W TFC4P33339 1025 aa6.93□□□□□ -1.3
LDB16YCL005W NIP100P33420 868 aa6.93□□□□□ -1.3
LDB16YCL005W STO1P34160 861 aaKnown RBP6.93□□□□□ -1.3
LDB16YCL005W YEL1P34225 687 aa6.93□□□□□ -1.3
LDB16YCL005W PPX1P38698 397 aa6.93□□□□□ -1.3
LDB16YCL005W CEP3P40969 608 aa6.93□□□□□ -1.3
LDB16YCL005W VPS53P47061 822 aa6.93□□□□□ -1.3
LDB16YCL005W CAF130P53280 1122 aaPredicted RBP6.93□□□□□ -1.3
LDB16YCL005W DUS4Q06063 367 aa6.93□□□□□ -1.3
LDB16YCL005W YPR078CQ06813 372 aa6.93□□□□□ -1.3
LDB16YCL005W RLP24Q07915 199 aaKnown RBP6.93□□□□□ -1.3
LDB16YCL005W MLH2Q07980 695 aa6.93□□□□□ -1.3
LDB16YCL005W NOP58Q12499 511 aaKnown RBP6.93□□□□□ -1.3
LDB16YCL005W ECM29P38737 1868 aa6.92□□□□□ -1.3
LDB16YCL005W PET111P08468 800 aa6.92□□□□□ -1.3
LDB16YCL005W PDC6P26263 563 aaKnown RBP6.92□□□□□ -1.3
LDB16YCL005W MLF3P32047 452 aa6.92□□□□□ -1.3
LDB16YCL005W SMC1P32908 1225 aa6.92□□□□□ -1.3
LDB16YCL005W KTR2P33550 425 aa6.92□□□□□ -1.3
LDB16YCL005W APE3P37302 537 aaKnown RBP6.92□□□□□ -1.3
LDB16YCL005W MCX1P38323 520 aaPredicted RBP6.92□□□□□ -1.3
LDB16YCL005W YEL025CP39991 1188 aa6.92□□□□□ -1.3
LDB16YCL005W SEC9P40357 651 aa6.92□□□□□ -1.3
LDB16YCL005W IES1P43579 692 aa6.92□□□□□ -1.3
LDB16YCL005W MDR1P53258 950 aa6.92□□□□□ -1.3
LDB16YCL005W YNL165WP53891 406 aa6.92□□□□□ -1.3
LDB16YCL005W NOC3Q07896 663 aaPredicted RBP6.92□□□□□ -1.3
LDB16YCL005W FAL1Q12099 399 aaKnown RBP6.92□□□□□ -1.3
LDB16YCL005W YLL058WQ12198 575 aa6.92□□□□□ -1.3
LDB16YCL005W SFI1Q12369 946 aa6.92□□□□□ -1.3
LDB16YCL005W CHS2P14180 963 aa6.91□□□□□ -1.3
LDB16YCL005W UBC1P21734 215 aaKnown RBP6.91□□□□□ -1.3
LDB16YCL005W VMA3P25515 160 aa6.91□□□□□ -1.3
LDB16YCL005W SRB4P32569 687 aa6.91□□□□□ -1.3
LDB16YCL005W COT1P32798 439 aa6.91□□□□□ -1.3
LDB16YCL005W DBP7P36120 742 aaKnown RBP6.91□□□□□ -1.3
LDB16YCL005W LDH1P38139 375 aa6.91□□□□□ -1.3
LDB16YCL005W DYS1P38791 387 aa6.91□□□□□ -1.3
LDB16YCL005W CCC2P38995 1004 aa6.91□□□□□ -1.3
LDB16YCL005W NDC80P40460 691 aa6.91□□□□□ -1.3
LDB16YCL005W LCB2P40970 561 aa6.91□□□□□ -1.3
LDB16YCL005W ROD1Q02805 837 aa6.91□□□□□ -1.3
LDB16YCL005W SML1Q04964 104 aa6.91□□□□□ -1.3
LDB16YCL005W YLR297WQ05899 129 aa6.91□□□□□ -1.3
LDB16YCL005W TSR1Q07381 788 aaKnown RBP6.91□□□□□ -1.3
LDB16YCL005W GPI13Q07830 1017 aa6.91□□□□□ -1.3
LDB16YCL005W DED1P06634 604 aaKnown RBP6.9□□□□□ -1.3
LDB16YCL005W TOM70P07213 617 aaKnown RBP6.9□□□□□ -1.3
LDB16YCL005W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
LDB16YCL005W RAD57P25301 460 aa6.9□□□□□ -1.3
LDB16YCL005W NAM7P30771 971 aaKnown RBP6.9□□□□□ -1.3
LDB16YCL005W JNM1P36224 373 aa6.9□□□□□ -1.3
LDB16YCL005W SDS3P40505 327 aa6.9□□□□□ -1.3
LDB16YCL005W EFM4P40516 257 aa6.9□□□□□ -1.3
LDB16YCL005W TAM41P53230 385 aa6.9□□□□□ -1.3
LDB16YCL005W TIM8P57744 87 aa6.9□□□□□ -1.3
LDB16YCL005W DON1Q05610 365 aa6.9□□□□□ -1.3
LDB16YCL005W NUT2Q06213 157 aa6.9□□□□□ -1.3
LDB16YCL005W VAC14Q06708 880 aa6.9□□□□□ -1.3
LDB16YCL005W OSW2Q12202 724 aa6.9□□□□□ -1.3
LDB16YCL005W TRM11Q12463 433 aa6.9□□□□□ -1.3
LDB16YCL005W RPS31P05759 152 aaKnown RBP6.89□□□□□ -1.31
LDB16YCL005W TUP1P16649 713 aa6.89□□□□□ -1.31
LDB16YCL005W MUD1P32605 298 aaKnown RBP6.89□□□□□ -1.31
LDB16YCL005W KAP122P32767 1081 aa6.89□□□□□ -1.31
LDB16YCL005W RGT1P32862 1170 aa6.89□□□□□ -1.31
LDB16YCL005W YKL023WP36103 277 aaKnown RBP6.89□□□□□ -1.31
LDB16YCL005W ERC1P38767 581 aa6.89□□□□□ -1.31
LDB16YCL005W EAF5P39995 279 aa6.89□□□□□ -1.31
LDB16YCL005W AVT1P47082 602 aa6.89□□□□□ -1.31
LDB16YCL005W RTT102P53330 157 aa6.89□□□□□ -1.31
LDB16YCL005W YMR321CQ04898 105 aa6.89□□□□□ -1.31
LDB16YCL005W COQ9Q05779 260 aa6.89□□□□□ -1.31
LDB16YCL005W CSR1Q06705 408 aaKnown RBP6.89□□□□□ -1.31
LDB16YCL005W DAS2Q12084 232 aa6.89□□□□□ -1.31
LDB16YCL005W CKI1P20485 582 aa6.88□□□□□ -1.31
LDB16YCL005W STE11P23561 717 aa6.88□□□□□ -1.31
LDB16YCL005W DPB3P27344 201 aa6.88□□□□□ -1.31
LDB16YCL005W RME1P32338 300 aaKnown RBP6.88□□□□□ -1.31
LDB16YCL005W YEL043WP32618 956 aa6.88□□□□□ -1.31
LDB16YCL005W TIM23P32897 222 aa6.88□□□□□ -1.31
LDB16YCL005W GLY1P37303 387 aaKnown RBP6.88□□□□□ -1.31
LDB16YCL005W REI1P38344 393 aaPredicted RBP6.88□□□□□ -1.31
LDB16YCL005W TCD1P38756 429 aa6.88□□□□□ -1.31
LDB16YCL005W YMR124WP39523 943 aaKnown RBP6.88□□□□□ -1.31
LDB16YCL005W MXR1P40029 184 aa6.88□□□□□ -1.31
LDB16YCL005W HXT8P40886 569 aa6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms