RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W YJR079WP47126 109 aa5.35□□□□□ -1.55
CDC28YBR160W ENP2P48234 707 aaKnown RBP5.35□□□□□ -1.55
CDC28YBR160W RNH70P53331 553 aa5.35□□□□□ -1.55
CDC28YBR160W SIW14P53965 281 aa5.35□□□□□ -1.55
CDC28YBR160W PKH1Q03407 766 aa5.35□□□□□ -1.55
CDC28YBR160W YLR257WQ06146 321 aaKnown RBP5.35□□□□□ -1.55
CDC28YBR160W YOR059CQ08448 450 aaKnown RBP5.35□□□□□ -1.55
CDC28YBR160W PUS7Q08647 676 aaKnown RBP5.35□□□□□ -1.55
CDC28YBR160W CDC53Q12018 815 aaKnown RBP5.35□□□□□ -1.55
CDC28YBR160W YVC1Q12324 675 aa5.35□□□□□ -1.55
CDC28YBR160W SNU66Q12420 587 aaPredicted RBP5.35□□□□□ -1.55
CDC28YBR160W SEC39Q12745 709 aa5.35□□□□□ -1.55
CDC28YBR160W POM152P39685 1337 aa5.34□□□□□ -1.55
CDC28YBR160W CKI1P20485 582 aa5.34□□□□□ -1.55
CDC28YBR160W SWI4P25302 1093 aaKnown RBP5.34□□□□□ -1.55
CDC28YBR160W SAC6P32599 642 aaKnown RBP5.34□□□□□ -1.55
CDC28YBR160W YET1P35723 206 aa5.34□□□□□ -1.55
CDC28YBR160W TDA3P38758 523 aa5.34□□□□□ -1.55
CDC28YBR160W CTM1P38818 585 aa5.34□□□□□ -1.55
CDC28YBR160W YMR147WP40218 223 aaKnown RBP5.34□□□□□ -1.55
CDC28YBR160W SHQ1P40486 507 aaPredicted RBP5.34□□□□□ -1.55
CDC28YBR160W MIC19P43594 170 aa5.34□□□□□ -1.55
CDC28YBR160W CWC22P53333 577 aaKnown RBP5.34□□□□□ -1.55
CDC28YBR160W DOS2P54858 310 aa5.34□□□□□ -1.55
CDC28YBR160W NGL3Q03210 505 aa5.34□□□□□ -1.55
CDC28YBR160W POB3Q04636 552 aaKnown RBP5.34□□□□□ -1.55
CDC28YBR160W STE23Q06010 1027 aa5.34□□□□□ -1.55
CDC28YBR160W SFH1Q06168 426 aa5.34□□□□□ -1.55
CDC28YBR160W AFT2Q08957 416 aa5.34□□□□□ -1.55
CDC28YBR160W CDC8P00572 216 aa5.33□□□□□ -1.56
CDC28YBR160W GCR1P07261 785 aa5.33□□□□□ -1.56
CDC28YBR160W CDC6P09119 513 aa5.33□□□□□ -1.56
CDC28YBR160W MTF2P10849 440 aa5.33□□□□□ -1.56
CDC28YBR160W STI1P15705 589 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
CDC28YBR160W RET1P22276 1149 aaKnown RBP5.33□□□□□ -1.56
CDC28YBR160W RAD57P25301 460 aa5.33□□□□□ -1.56
CDC28YBR160W SEC65P29478 273 aa5.33□□□□□ -1.56
CDC28YBR160W HIR1P32479 840 aa5.33□□□□□ -1.56
CDC28YBR160W SRB4P32569 687 aa5.33□□□□□ -1.56
CDC28YBR160W SWE1P32944 819 aa5.33□□□□□ -1.56
CDC28YBR160W MAC1P35192 417 aa5.33□□□□□ -1.56
CDC28YBR160W SMF1P38925 575 aa5.33□□□□□ -1.56
CDC28YBR160W PEX7P39108 375 aa5.33□□□□□ -1.56
CDC28YBR160W ENV11P53246 860 aa5.33□□□□□ -1.56
CDC28YBR160W NRD1P53617 575 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
CDC28YBR160W FCP1Q03254 732 aa5.33□□□□□ -1.56
CDC28YBR160W MMR1Q06324 491 aa5.33□□□□□ -1.56
CDC28YBR160W ATG13Q06628 738 aa5.33□□□□□ -1.56
CDC28YBR160W BRE4Q07660 1125 aa5.33□□□□□ -1.56
CDC28YBR160W TOP1P04786 769 aa5.32□□□□□ -1.56
CDC28YBR160W PRP16P15938 1071 aaPredicted RBP5.32□□□□□ -1.56
CDC28YBR160W CDC10P25342 322 aaKnown RBP5.32□□□□□ -1.56
CDC28YBR160W HXT1P32465 570 aa5.32□□□□□ -1.56
CDC28YBR160W DUT1P33317 147 aa5.32□□□□□ -1.56
CDC28YBR160W HSE1P38753 452 aa5.32□□□□□ -1.56
CDC28YBR160W QNS1P38795 714 aaKnown RBP5.32□□□□□ -1.56
CDC28YBR160W VFA1P40080 203 aa5.32□□□□□ -1.56
CDC28YBR160W IOC3P43596 787 aa5.32□□□□□ -1.56
CDC28YBR160W TRS85P46944 698 aa5.32□□□□□ -1.56
CDC28YBR160W YGR237CP50089 785 aa5.32□□□□□ -1.56
CDC28YBR160W HFM1P51979 1187 aa5.32□□□□□ -1.56
CDC28YBR160W SDH1Q00711 640 aa5.32□□□□□ -1.56
CDC28YBR160W ROD1Q02805 837 aa5.32□□□□□ -1.56
CDC28YBR160W PPM2Q08282 695 aa5.32□□□□□ -1.56
CDC28YBR160W LAP2Q10740 671 aa5.32□□□□□ -1.56
CDC28YBR160W CEX1Q12453 761 aa5.32□□□□□ -1.56
CDC28YBR160W PTC5Q12511 572 aa5.32□□□□□ -1.56
CDC28YBR160W CDC37P06101 506 aaKnown RBP5.31□□□□□ -1.56
CDC28YBR160W RAD1P06777 1100 aa5.31□□□□□ -1.56
CDC28YBR160W RAD3P06839 778 aa5.31□□□□□ -1.56
CDC28YBR160W PMR1P13586 950 aa5.31□□□□□ -1.56
CDC28YBR160W CDC34P14682 295 aa5.31□□□□□ -1.56
CDC28YBR160W ALG1P16661 449 aa5.31□□□□□ -1.56
CDC28YBR160W HCA4P20448 770 aaKnown RBP5.31□□□□□ -1.56
CDC28YBR160W PRI2P20457 528 aa5.31□□□□□ -1.56
CDC28YBR160W GRX1P25373 110 aaKnown RBP5.31□□□□□ -1.56
CDC28YBR160W RRP14P36080 434 aaKnown RBP5.31□□□□□ -1.56
CDC28YBR160W MIP6P38760 659 aaKnown RBP5.31□□□□□ -1.56
CDC28YBR160W AIP1P46680 615 aaKnown RBP5.31□□□□□ -1.56
CDC28YBR160W IRC8P47046 822 aa5.31□□□□□ -1.56
CDC28YBR160W YNR063WP53749 607 aa5.31□□□□□ -1.56
CDC28YBR160W RTC4P53850 401 aa5.31□□□□□ -1.56
CDC28YBR160W NCS2P53923 493 aaPredicted RBP5.31□□□□□ -1.56
CDC28YBR160W EBS1Q03466 884 aaKnown RBP5.31□□□□□ -1.56
CDC28YBR160W TPP1Q03796 238 aa5.31□□□□□ -1.56
CDC28YBR160W EIS1Q05050 843 aaKnown RBP5.31□□□□□ -1.56
CDC28YBR160W YLR287CQ05881 355 aa5.31□□□□□ -1.56
CDC28YBR160W RRP6Q12149 733 aaKnown RBP5.31□□□□□ -1.56
CDC28YBR160W HIS4P00815 799 aaKnown RBP5.3□□□□□ -1.56
CDC28YBR160W SAM35P14693 329 aa5.3□□□□□ -1.56
CDC28YBR160W SPO12P17123 173 aa5.3□□□□□ -1.56
CDC28YBR160W PRE10P21242 288 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
CDC28YBR160W VPS1P21576 704 aaKnown RBP5.3□□□□□ -1.56
CDC28YBR160W DAL7P21826 554 aa5.3□□□□□ -1.56
CDC28YBR160W RAD53P22216 821 aa5.3□□□□□ -1.56
CDC28YBR160W RAD27P26793 382 aa5.3□□□□□ -1.56
CDC28YBR160W MKK2P32491 506 aa5.3□□□□□ -1.56
CDC28YBR160W RXT2P38255 430 aa5.3□□□□□ -1.56
CDC28YBR160W SAP1P39955 897 aaKnown RBP5.3□□□□□ -1.56
CDC28YBR160W YJL045WP47052 634 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms