RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W ICP55P40051 511 aa7.54□□□□□ -1.2
TOD6YBL054W ROG3P43602 733 aa7.54□□□□□ -1.2
TOD6YBL054W YKR005CQ02203 525 aa7.54□□□□□ -1.2
TOD6YBL054W AIM33Q04516 312 aa7.54□□□□□ -1.2
TOD6YBL054W YDL057WQ07379 328 aa7.54□□□□□ -1.2
TOD6YBL054W SUI3P09064 285 aaKnown RBP7.53□□□□□ -1.2
TOD6YBL054W YML002WP0CF17 737 aa7.53□□□□□ -1.2
TOD6YBL054W PFK1P16861 987 aaKnown RBP7.53□□□□□ -1.2
TOD6YBL054W KIP1P28742 1111 aa7.53□□□□□ -1.2
TOD6YBL054W SEC21P32074 935 aaKnown RBP7.53□□□□□ -1.2
TOD6YBL054W COY1P34237 679 aa7.53□□□□□ -1.2
TOD6YBL054W TRZ1P36159 838 aaPredicted RBP7.53□□□□□ -1.2
TOD6YBL054W UBP13P38187 747 aa7.53□□□□□ -1.2
TOD6YBL054W YBP1P38315 674 aa7.53□□□□□ -1.2
TOD6YBL054W ORC6P38826 435 aa7.53□□□□□ -1.2
TOD6YBL054W OAF1P39720 1047 aaPredicted RBP7.53□□□□□ -1.2
TOD6YBL054W NOP9P47077 666 aaKnown RBP7.53□□□□□ -1.2
TOD6YBL054W COS5P47187 383 aa7.53□□□□□ -1.2
TOD6YBL054W RNR4P49723 345 aaKnown RBP7.53□□□□□ -1.2
TOD6YBL054W UBP15P50101 1230 aa7.53□□□□□ -1.2
TOD6YBL054W YGR016WP53209 190 aa7.53□□□□□ -1.2
TOD6YBL054W IRC4Q03036 179 aa7.53□□□□□ -1.2
TOD6YBL054W FMN1Q03778 218 aa7.53□□□□□ -1.2
TOD6YBL054W SGT2Q12118 346 aaKnown RBP7.53□□□□□ -1.2
TOD6YBL054W GET4Q12125 312 aa7.53□□□□□ -1.2
TOD6YBL054W ENT1Q12518 454 aa7.53□□□□□ -1.2
TOD6YBL054W MRF1P30775 413 aaPredicted RBP7.52□□□□□ -1.21
TOD6YBL054W FRD1P32614 470 aaKnown RBP7.52□□□□□ -1.21
TOD6YBL054W YKR015CP36111 568 aa7.52□□□□□ -1.21
TOD6YBL054W YHL008CP38750 627 aa7.52□□□□□ -1.21
TOD6YBL054W SPC97P38863 823 aa7.52□□□□□ -1.21
TOD6YBL054W GAA1P39012 614 aa7.52□□□□□ -1.21
TOD6YBL054W ALA1P40825 983 aaKnown RBP7.52□□□□□ -1.21
TOD6YBL054W RPA14P50106 137 aa7.52□□□□□ -1.21
TOD6YBL054W SXM1Q04175 944 aaKnown RBP7.52□□□□□ -1.21
TOD6YBL054W YMR027WQ04371 470 aa7.52□□□□□ -1.21
TOD6YBL054W RGA2Q06407 1009 aa7.52□□□□□ -1.21
TOD6YBL054W OXR1Q08952 273 aa7.52□□□□□ -1.21
TOD6YBL054W SNF1P06782 633 aaKnown RBP7.51□□□□□ -1.21
TOD6YBL054W CMD1P06787 147 aaKnown RBP7.51□□□□□ -1.21
TOD6YBL054W SWI6P09959 803 aa7.51□□□□□ -1.21
TOD6YBL054W SEC63P14906 663 aa7.51□□□□□ -1.21
TOD6YBL054W ACE2P21192 770 aa7.51□□□□□ -1.21
TOD6YBL054W ADY2P25613 283 aa7.51□□□□□ -1.21
TOD6YBL054W DBF4P32325 704 aa7.51□□□□□ -1.21
TOD6YBL054W RPN2P32565 945 aaKnown RBP7.51□□□□□ -1.21
TOD6YBL054W ATO2P32907 282 aa7.51□□□□□ -1.21
TOD6YBL054W NUP120P35729 1037 aa7.51□□□□□ -1.21
TOD6YBL054W SET3P36124 751 aa7.51□□□□□ -1.21
TOD6YBL054W NCL1P38205 684 aaKnown RBP7.51□□□□□ -1.21
TOD6YBL054W FES1P38260 290 aa7.51□□□□□ -1.21
TOD6YBL054W NUP82P40368 713 aa7.51□□□□□ -1.21
TOD6YBL054W DPH1P40487 425 aaKnown RBP7.51□□□□□ -1.21
TOD6YBL054W YFH7P43591 353 aa7.51□□□□□ -1.21
TOD6YBL054W TAF1P46677 1066 aa7.51□□□□□ -1.21
TOD6YBL054W LIA1P47120 325 aaKnown RBP7.51□□□□□ -1.21
TOD6YBL054W ORM1P53224 222 aa7.51□□□□□ -1.21
TOD6YBL054W YGR273CP53329 174 aa7.51□□□□□ -1.21
TOD6YBL054W PTA1Q01329 785 aaPredicted RBP7.51□□□□□ -1.21
TOD6YBL054W BUL2Q03758 920 aaKnown RBP7.51□□□□□ -1.21
TOD6YBL054W NOC3Q07896 663 aaPredicted RBP7.51□□□□□ -1.21
TOD6YBL054W MDM20Q12387 796 aaKnown RBP7.51□□□□□ -1.21
TOD6YBL054W MST1P07236 462 aa7.5□□□□□ -1.21
TOD6YBL054W SUP45P12385 437 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W EXO70P19658 623 aa7.5□□□□□ -1.21
TOD6YBL054W AAD3P25612 363 aa7.5□□□□□ -1.21
TOD6YBL054W HEM3P28789 327 aa7.5□□□□□ -1.21
TOD6YBL054W TPS2P31688 896 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W MET4P32389 672 aa7.5□□□□□ -1.21
TOD6YBL054W RAD54P32863 898 aa7.5□□□□□ -1.21
TOD6YBL054W YKR075CP36155 307 aa7.5□□□□□ -1.21
TOD6YBL054W PAM1P37304 830 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W EXO5P38289 585 aa7.5□□□□□ -1.21
TOD6YBL054W POP4P38336 279 aa7.5□□□□□ -1.21
TOD6YBL054W YMR134WP40207 237 aa7.5□□□□□ -1.21
TOD6YBL054W PFK26P40433 827 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W TFG1P41895 735 aaPredicted RBP7.5□□□□□ -1.21
TOD6YBL054W FIG4P42837 879 aa7.5□□□□□ -1.21
TOD6YBL054W YFR006WP43590 535 aa7.5□□□□□ -1.21
TOD6YBL054W MIG2P53035 382 aa7.5□□□□□ -1.21
TOD6YBL054W RPT4P53549 437 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W YNL247WP53852 767 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W SQS1P53866 767 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W PGA2P53903 129 aa7.5□□□□□ -1.21
TOD6YBL054W ATG16Q03818 150 aa7.5□□□□□ -1.21
TOD6YBL054W SNF3P10870 884 aa7.5□□□□□ -1.21
TOD6YBL054W LCB1P25045 558 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W SEC6P32844 805 aa7.5□□□□□ -1.21
TOD6YBL054W TRM5P38793 499 aa7.5□□□□□ -1.21
TOD6YBL054W ARB1P40024 610 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W DIM1P41819 318 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W VMA10P48836 114 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W SHE4P51534 789 aa7.5□□□□□ -1.21
TOD6YBL054W VID30P53076 958 aa7.5□□□□□ -1.21
TOD6YBL054W FOL1P53848 824 aa7.5□□□□□ -1.21
TOD6YBL054W DAK1P54838 584 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W TMA20P89886 181 aaPredicted RBP7.5□□□□□ -1.21
TOD6YBL054W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
TOD6YBL054W RAT1Q02792 1006 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W SEN54Q02825 467 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms