RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 ATL2Q8NHH9 583 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 TDRD7Q8NHU6 1098 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 B4GALNT2Q8NHY0 566 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 CXorf38Q8TB03 319 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 FAM81AQ8TBF8 368 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 AFAP1L1Q8TED9 768 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 SMCR8Q8TEV9 937 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 ZFAND2BQ8WV99 257 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 EZH1Q92800 747 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 JAKMIP2Q96AA8 810 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 HOOK2Q96ED9 719 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 SAAL1Q96ER3 474 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 BICD1Q96G01 975 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 MRFAP1L1Q96HT8 127 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 INTS4Q96HW7 963 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 ALS2CR12Q96Q35 445 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 JPH2Q9BR39 696 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 MTA3Q9BTC8 594 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 FUT8Q9BYC5 575 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 MMADHCQ9H3L0 296 aaPredicted RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 KIF9Q9HAQ2 790 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ARFGAP3Q9NP61 516 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 TRPV5Q9NQA5 729 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 RGL1Q9NZL6 768 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 VPS18Q9P253 973 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ABCF2Q9UG63 623 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 FRMD4BQ9Y2L6 1034 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ZDHHC9Q9Y397 364 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.21□□□□□ -2.06
TCF4-264ENST00000628391 CDK13Q14004 1512 aaKnown RBP2.21□□□□□ -2.06
TCF4-264ENST00000628391 LMTK2Q8IWU2 1503 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 MSH6P52701 1360 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ABCC11Q96J66 1382 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 MYH15Q9Y2K3 1946 aa2.21□□□□□ -2.06
TCF4-264ENST00000628391 ABCA9Q8IUA7 1624 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 SYNJ2O15056 1496 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 IFT140Q96RY7 1462 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 NRXN1Q9ULB1 1477 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 RPGRIP1LQ68CZ1 1315 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 WDR33Q9C0J8 1336 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 MAST1Q9Y2H9 1570 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 ERBINQ96RT1 1412 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 SHTN1A0MZ66 631 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 USP27XA6NNY8 438 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 EXOC5O00471 708 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 EBAG9O00559 213 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 AP5Z1O43299 807 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 KIF5CO60282 957 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 SHOX2O60902 331 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 FCHSD2O94868 740 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 SASH1O94885 1247 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 SEC31AO94979 1220 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 FAM200BP0CF97 657 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 VDRP11473 427 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 DESP17661 470 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 VCAM1P19320 739 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 GBP2P32456 591 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 RANBP1P43487 201 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 USP5P45974 858 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 GJA8P48165 433 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 TRPC1P48995 793 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 ZNF75DP51815 510 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CDR1P51861 262 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 SESN3P58005 492 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 PSMC1P62191 440 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 GNAI1P63096 354 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 TUBB4BP68371 445 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CCZ1BP86790 482 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CCZ1P86791 482 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 NUCB1Q02818 461 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 PSME1Q06323 249 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 IFFO1Q0D2I5 559 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 APOBRQ0VD83 1088 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 DRP2Q13474 957 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CUL4AQ13619 759 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 DCTN1Q14203 1278 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 NAA25Q14CX7 972 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 TAF7Q15545 349 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 SNCBQ16143 134 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 LONRF2Q1L5Z9 754 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 LRRFIP1Q32MZ4 808 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 PUS10Q3MIT2 529 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 KBTBD12Q3ZCT8 623 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 LRRC23Q53EV4 343 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 GJC2Q5T442 439 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 NUTM2GQ5VZR2 741 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 ZKSCAN2Q63HK3 967 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CWF19L1Q69YN2 538 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 CAPRIN2Q6IMN6 1127 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 TLDC1Q6P9B6 456 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 FOXR1Q6PIV2 292 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 SLC30A9Q6PML9 568 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CWC27Q6UX04 472 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 TBC1D9Q6ZT07 1266 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 TTLL7Q6ZT98 887 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CCDC80Q76M96 950 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 GET4Q7L5D6 327 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 HDXQ7Z353 690 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 FCHSD1Q86WN1 690 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 FAM114A1Q8IWE2 563 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms