RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 PELP1Q8IZL8 1130 aaKnown RBP3.5□□□□□ -1.85
TCF4-264ENST00000628391 MYT1Q01538 1121 aa3.47□□□□□ -1.85
TCF4-264ENST00000628391 TTBK1Q5TCY1 1321 aaPredicted RBP3.36□□□□□ -1.87
TCF4-264ENST00000628391 HRCP23327 699 aa3.23□□□□□ -1.89
TCF4-264ENST00000628391 PRKCSHP14314 528 aaPredicted RBP3.15□□□□□ -1.91
TCF4-264ENST00000628391 ERICH6Q7L0X2 663 aa3.15□□□□□ -1.91
TCF4-264ENST00000628391 SCAF1Q9H7N4 1312 aaKnown RBP3.13□□□□□ -1.91
TCF4-264ENST00000628391 APLP2Q06481 763 aa3.12□□□□□ -1.91
TCF4-264ENST00000628391 BCL11AQ9H165 835 aa3.1□□□□□ -1.91
TCF4-264ENST00000628391 CCDC180Q9P1Z9 1646 aa3.1□□□□□ -1.91
TCF4-264ENST00000628391 NISCHQ9Y2I1 1504 aa3.07□□□□□ -1.92
TCF4-264ENST00000628391 SLC24A1O60721 1099 aa3.06□□□□□ -1.92
TCF4-264ENST00000628391 CENPBP07199 599 aaPredicted RBP3.06□□□□□ -1.92
TCF4-264ENST00000628391 MYO15BQ96JP2 1530 aa3.04□□□□□ -1.92
TCF4-264ENST00000628391 DCAF1Q9Y4B6 1507 aa3.04□□□□□ -1.92
TCF4-264ENST00000628391 PPARGC1BQ86YN6 1023 aaKnown RBP3.04□□□□□ -1.92
TCF4-264ENST00000628391 FAM9AQ8IZU1 332 aaPredicted RBP3.04□□□□□ -1.92
TCF4-264ENST00000628391 ZEB1P37275 1124 aaPredicted RBP3.02□□□□□ -1.93
TCF4-264ENST00000628391 ACIN1Q9UKV3 1341 aaKnown RBP3.01□□□□□ -1.93
TCF4-264ENST00000628391 ANP32EQ9BTT0 268 aa2.98□□□□□ -1.93
TCF4-264ENST00000628391 DAXXQ9UER7 740 aaPredicted RBP2.98□□□□□ -1.93
TCF4-264ENST00000628391 PCGF6Q9BYE7 350 aa2.97□□□□□ -1.93
TCF4-264ENST00000628391 NEUROD1Q13562 356 aa2.96□□□□□ -1.94
TCF4-264ENST00000628391 GTF3C3Q9Y5Q9 886 aa2.96□□□□□ -1.94
TCF4-264ENST00000628391 CLSPNQ9HAW4 1339 aa2.94□□□□□ -1.94
TCF4-264ENST00000628391 EIF5BO60841 1220 aaKnown RBP2.91□□□□□ -1.94
TCF4-264ENST00000628391 TRIM26Q12899 539 aaPredicted RBP2.9□□□□□ -1.95
TCF4-264ENST00000628391 UBE2Q2Q8WVN8 375 aa2.9□□□□□ -1.95
TCF4-264ENST00000628391 CSRNP3Q8WYN3 585 aa2.9□□□□□ -1.95
TCF4-264ENST00000628391 MYT1LQ9UL68 1186 aa2.89□□□□□ -1.95
TCF4-264ENST00000628391 ERICH6BQ5W0A0 696 aa2.88□□□□□ -1.95
TCF4-264ENST00000628391 TSHZ2Q9NRE2 1034 aa2.84□□□□□ -1.95
TCF4-264ENST00000628391 DIEXFQ68CQ4 756 aaKnown RBP2.83□□□□□ -1.96
TCF4-264ENST00000628391 PKNOX2Q96KN3 472 aa2.83□□□□□ -1.96
TCF4-264ENST00000628391 CHIC1Q5VXU3 224 aa2.82□□□□□ -1.96
TCF4-264ENST00000628391 ANO8Q9HCE9 1232 aaPredicted RBP2.82□□□□□ -1.96
TCF4-264ENST00000628391 PODXL2Q9NZ53 605 aa2.81□□□□□ -1.96
TCF4-264ENST00000628391 SUPT16HQ9Y5B9 1047 aaKnown RBP2.8□□□□□ -1.96
TCF4-264ENST00000628391 TRIM41Q8WV44 630 aa2.79□□□□□ -1.96
TCF4-264ENST00000628391 PLEKHG5O94827 1062 aa2.78□□□□□ -1.96
TCF4-264ENST00000628391 SALL2Q9Y467 1007 aaPredicted RBP2.78□□□□□ -1.96
TCF4-264ENST00000628391 FANCIQ9NVI1 1328 aa2.77□□□□□ -1.97
TCF4-264ENST00000628391 NEFLP07196 543 aa2.77□□□□□ -1.97
TCF4-264ENST00000628391 DEKP35659 375 aaKnown RBP2.76□□□□□ -1.97
TCF4-264ENST00000628391 YTHDC1Q96MU7 727 aaKnown RBP2.76□□□□□ -1.97
TCF4-264ENST00000628391 ZNF316A6NFI3 1004 aaPredicted RBP2.75□□□□□ -1.97
TCF4-264ENST00000628391 GLIPR1L2Q4G1C9 344 aa2.75□□□□□ -1.97
TCF4-264ENST00000628391 NCBP3Q53F19 620 aaKnown RBP2.75□□□□□ -1.97
TCF4-264ENST00000628391 CCER1Q8TC90 406 aaPredicted RBP2.74□□□□□ -1.97
TCF4-264ENST00000628391 CCDC136Q96JN2 1154 aa2.74□□□□□ -1.97
TCF4-264ENST00000628391 RBM19Q9Y4C8 960 aaKnown RBP2.74□□□□□ -1.97
TCF4-264ENST00000628391 SUPT5HO00267 1087 aaKnown RBP2.73□□□□□ -1.97
TCF4-264ENST00000628391 MSH5O43196 834 aa2.72□□□□□ -1.97
TCF4-264ENST00000628391 RANGAP1P46060 587 aaPredicted RBP2.72□□□□□ -1.97
TCF4-264ENST00000628391 ARXQ96QS3 562 aa2.72□□□□□ -1.97
TCF4-264ENST00000628391 PDIA4P13667 645 aaKnown RBP2.71□□□□□ -1.98
TCF4-264ENST00000628391 MIER1Q8N108 512 aa2.71□□□□□ -1.98
TCF4-264ENST00000628391 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.71□□□□□ -1.98
TCF4-264ENST00000628391 C11orf95C9JLR9 678 aaPredicted RBP2.7□□□□□ -1.98
TCF4-264ENST00000628391 PDE4CQ08493 712 aa2.7□□□□□ -1.98
TCF4-264ENST00000628391 ZCCHC6Q5VYS8 1495 aaKnown RBP2.7□□□□□ -1.98
TCF4-264ENST00000628391 SHROOM4Q9ULL8 1493 aa2.7□□□□□ -1.98
TCF4-264ENST00000628391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.69□□□□□ -1.98
TCF4-264ENST00000628391 RTL5Q5HYW3 569 aaPredicted RBP2.69□□□□□ -1.98
TCF4-264ENST00000628391 RSPH6AQ9H0K4 717 aa2.69□□□□□ -1.98
TCF4-264ENST00000628391 LOC105371045A0A1W2PR82 267 aa2.68□□□□□ -1.98
TCF4-264ENST00000628391 FGD1P98174 961 aa2.68□□□□□ -1.98
TCF4-264ENST00000628391 AAMPQ13685 434 aa2.68□□□□□ -1.98
TCF4-264ENST00000628391 TAF7LQ5H9L4 462 aa2.68□□□□□ -1.98
TCF4-264ENST00000628391 IL27Q8NEV9 243 aa2.68□□□□□ -1.98
TCF4-264ENST00000628391 WRNQ14191 1432 aaPredicted RBP eCLIP2.68□□□□□ -1.98
TCF4-264ENST00000628391 ZMYND15Q9H091 742 aa2.67□□□□□ -1.98
TCF4-264ENST00000628391 NOP58Q9Y2X3 529 aaKnown RBP2.67□□□□□ -1.98
TCF4-264ENST00000628391 ZNF326Q5BKZ1 582 aaKnown RBP2.66□□□□□ -1.98
TCF4-264ENST00000628391 KLHL34Q8N239 644 aa2.66□□□□□ -1.98
TCF4-264ENST00000628391 RTN4Q9NQC3 1192 aaKnown RBP2.66□□□□□ -1.98
TCF4-264ENST00000628391 WASHC2AQ641Q2 1341 aa2.66□□□□□ -1.98
TCF4-264ENST00000628391 WASHC2CQ9Y4E1 1318 aa2.66□□□□□ -1.98
TCF4-264ENST00000628391 RBM10P98175 930 aaKnown RBP2.65□□□□□ -1.99
TCF4-264ENST00000628391 FKBP8Q14318 412 aa2.65□□□□□ -1.99
TCF4-264ENST00000628391 VSIG10Q8N0Z9 540 aa2.65□□□□□ -1.99
TCF4-264ENST00000628391 BCANQ96GW7 911 aa2.65□□□□□ -1.99
TCF4-264ENST00000628391 USP35Q9P2H5 1018 aa2.65□□□□□ -1.99
TCF4-264ENST00000628391 CDK11AQ9UQ88 783 aaPredicted RBP2.65□□□□□ -1.99
TCF4-264ENST00000628391 EEA1Q15075 1411 aa2.65□□□□□ -1.99
TCF4-264ENST00000628391 ABCC9O60706 1549 aa2.64□□□□□ -1.99
TCF4-264ENST00000628391 A0A0U1RQG5 324 aaPredicted RBP2.64□□□□□ -1.99
TCF4-264ENST00000628391 RRP9O43818 475 aaKnown RBP2.64□□□□□ -1.99
TCF4-264ENST00000628391 NBR1Q14596 966 aa2.64□□□□□ -1.99
TCF4-264ENST00000628391 FAM43AQ8N2R8 423 aa2.64□□□□□ -1.99
TCF4-264ENST00000628391 NACADO15069 1562 aa2.63□□□□□ -1.99
TCF4-264ENST00000628391 PEG3Q9GZU2 1588 aa2.63□□□□□ -1.99
TCF4-264ENST00000628391 BCL11BQ9C0K0 894 aaPredicted RBP2.63□□□□□ -1.99
TCF4-264ENST00000628391 NEFMP07197 916 aa2.62□□□□□ -1.99
TCF4-264ENST00000628391 BRD2P25440 801 aaKnown RBP2.62□□□□□ -1.99
TCF4-264ENST00000628391 ANP32AP39687 249 aaKnown RBP2.62□□□□□ -1.99
TCF4-264ENST00000628391 RSPH4AQ5TD94 716 aa2.62□□□□□ -1.99
TCF4-264ENST00000628391 CENPJQ9HC77 1338 aaPredicted RBP2.62□□□□□ -1.99
TCF4-264ENST00000628391 CALD1Q05682 793 aaKnown RBP2.61□□□□□ -1.99
TCF4-264ENST00000628391 HSP90AA2PQ14568 343 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms