RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 B4DLN1 442 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
COL4A5-201ENST00000328300 ERMNQ8TAM6 284 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 RMND1Q9NWS8 449 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 USP6P35125 1406 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 PKNOX2Q96KN3 472 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 SNRKQ9NRH2 765 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 UVSSAQ2YD98 709 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 SUPT20HQ8NEM7 779 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 ZC3H12CQ9C0D7 883 aaKnown RBP13.19□□□□□ -0.3
COL4A5-201ENST00000328300 CCNL1Q9UK58 526 aaPredicted RBP13.19□□□□□ -0.3
COL4A5-201ENST00000328300 SLC9C2Q5TAH2 1124 aa13.18□□□□□ -0.3
COL4A5-201ENST00000328300 FEZ1Q99689 392 aa13.18□□□□□ -0.3
COL4A5-201ENST00000328300 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
COL4A5-201ENST00000328300 CALML3P27482 149 aa13.18□□□□□ -0.3
COL4A5-201ENST00000328300 METP08581 1390 aa13.18□□□□□ -0.3
COL4A5-201ENST00000328300 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
COL4A5-201ENST00000328300 KCNG4Q8TDN1 519 aa13.18□□□□□ -0.3
COL4A5-201ENST00000328300 TFCP2L1Q9NZI6 479 aa13.18□□□□□ -0.3
COL4A5-201ENST00000328300 BRPF1P55201 1214 aaPredicted RBP13.18□□□□□ -0.3
COL4A5-201ENST00000328300 PUM3Q15397 648 aaKnown RBP13.18□□□□□ -0.3
COL4A5-201ENST00000328300 UBE2HP62256 183 aa13.18□□□□□ -0.3
COL4A5-201ENST00000328300 VPS36Q86VN1 386 aa13.18□□□□□ -0.3
COL4A5-201ENST00000328300 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
COL4A5-201ENST00000328300 INTS4Q96HW7 963 aaKnown RBP13.18□□□□□ -0.3
COL4A5-201ENST00000328300 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
COL4A5-201ENST00000328300 MROH5Q6ZUA9 1318 aa13.17□□□□□ -0.3
COL4A5-201ENST00000328300 ZFYVE27Q5T4F4 411 aa13.17□□□□□ -0.3
COL4A5-201ENST00000328300 RBM28Q9NW13 759 aaKnown RBP13.17□□□□□ -0.3
COL4A5-201ENST00000328300 A2ML1A8K2U0 1454 aa13.17□□□□□ -0.3
COL4A5-201ENST00000328300 IFIT1BQ5T764 474 aaKnown RBP13.17□□□□□ -0.3
COL4A5-201ENST00000328300 ZSCAN12O43309 604 aa13.17□□□□□ -0.3
COL4A5-201ENST00000328300 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
COL4A5-201ENST00000328300 EIF4A1P60842 406 aaKnown RBP13.17□□□□□ -0.3
COL4A5-201ENST00000328300 RTN1Q16799 776 aa13.17□□□□□ -0.3
COL4A5-201ENST00000328300 MAP3K4Q9Y6R4 1608 aa13.17□□□□□ -0.3
COL4A5-201ENST00000328300 CDK12Q9NYV4 1490 aaPredicted RBP13.17□□□□□ -0.3
COL4A5-201ENST00000328300 STX1AQ16623 288 aa13.17□□□□□ -0.3
COL4A5-201ENST00000328300 SH2D4AQ9H788 454 aa13.17□□□□□ -0.3
COL4A5-201ENST00000328300 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
COL4A5-201ENST00000328300 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
COL4A5-201ENST00000328300 TTC6Q86TZ1 520 aa13.16□□□□□ -0.3
COL4A5-201ENST00000328300 ZSCAN22P10073 491 aaPredicted RBP13.16□□□□□ -0.3
COL4A5-201ENST00000328300 NMIQ13287 307 aaPredicted RBP13.16□□□□□ -0.3
COL4A5-201ENST00000328300 CNNM3Q8NE01 707 aa13.16□□□□□ -0.3
COL4A5-201ENST00000328300 ERLIN1O75477 346 aa13.16□□□□□ -0.3
COL4A5-201ENST00000328300 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
COL4A5-201ENST00000328300 CROCC2H7BZ55 1655 aa13.16□□□□□ -0.3
COL4A5-201ENST00000328300 GNPATO15228 680 aa13.16□□□□□ -0.3
COL4A5-201ENST00000328300 TNNI2P48788 182 aa13.16□□□□□ -0.3
COL4A5-201ENST00000328300 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
COL4A5-201ENST00000328300 KDRP35968 1356 aa13.16□□□□□ -0.3
COL4A5-201ENST00000328300 LDHBP07195 334 aaKnown RBP13.16□□□□□ -0.3
COL4A5-201ENST00000328300 FERMT3Q86UX7 667 aa13.16□□□□□ -0.3
COL4A5-201ENST00000328300 SSFA2P28290 1259 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 CETN2P41208 172 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 CETN1Q12798 172 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 TFCP2Q12800 502 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 PPP2R5BQ15173 497 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 KDM6BO15054 1643 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 GSDMDP57764 484 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 CWF19L2Q2TBE0 894 aaKnown RBP13.15□□□□□ -0.3
COL4A5-201ENST00000328300 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 TNPO1Q92973 898 aaKnown RBP13.15□□□□□ -0.3
COL4A5-201ENST00000328300 TMX3Q96JJ7 454 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 PHKG2P15735 406 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 CCDC66A2RUB6 948 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 NF2P35240 595 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 JDP2Q8WYK2 163 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 BRF1Q92994 677 aa13.15□□□□□ -0.3
COL4A5-201ENST00000328300 FSIP1Q8NA03 581 aa13.15□□□□□ -0.31
COL4A5-201ENST00000328300 CCDC102BQ68D86 513 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 SLC26A6Q9BXS9 759 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 CARD10Q9BWT7 1032 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 GLT8D2Q9H1C3 349 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 ADGRB3O60242 1522 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 IGSF1Q8N6C5 1336 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 CCDC181Q5TID7 509 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 JAKMIP3Q5VZ66 844 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 CCDC150Q8NCX0 1101 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 C6orf50Q9HD87 102 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 PDE6BP35913 854 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 CFAP100Q494V2 611 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 TNNI3KQ59H18 835 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
COL4A5-201ENST00000328300 WDR66Q8TBY9 1149 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 FPGT-TNNI3KV9GXZ4 949 aa13.14□□□□□ -0.31
COL4A5-201ENST00000328300 LAMC1P11047 1609 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■■□ 24
COL4A5-201ENST00000328300 TTLL12Q14166 644 aaPredicted RBP13.13□□□□□ -0.31
COL4A5-201ENST00000328300 ABCC4O15439 1325 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 CHMLP26374 656 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 UBA7P41226 1012 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 657 ms