RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Cdca8Q8BHX3 289 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Phldb1Q6PDH0 1371 aaKnown RBP10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ccdc160Q3UYG1 323 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Zbtb21E9Q444 1094 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Metap2O08663 478 aaKnown RBP10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Sdad1Q80UZ2 687 aaKnown RBP10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Pih1h3bQ8C6P5 218 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Arfgap2Q99K28 520 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 EnahQ03173 802 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Zc4h2Q68FG0 224 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Smarca5Q91ZW3 1051 aaKnown RBP10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Syt10Q9R0N4 523 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Spocd1B1ASB6 936 aa10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ppp2r5cQ60996 524 aa10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ano6Q6P9J9 911 aa10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ankfy1Q810B6 1169 aa10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Bag2Q91YN9 210 aa10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Srgap1Q91Z69 1062 aa10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Klhdc4Q921I2 584 aa10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Strn4P58404 760 aa10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Slc7a3P70423 618 aa10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Bzw2Q91VK1 419 aaKnown RBP10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 AatfQ9JKX4 526 aaKnown RBP10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Letm1Q9Z2I0 738 aa10.52□□□□□ -0.72
Col6a5-201ENSMUST00000165165 HnrnpmQ9D0E1 729 aaKnown RBP10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Evi5lH3BKQ3 813 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Atp6v1e1P50518 226 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Apol7eQ3UZ24 369 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 HhatQ8BMT9 499 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Taco1Q8K0Z7 294 aaKnown RBP10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ttc1Q91Z38 292 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Iqca1lA6H690 825 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Speer2E9Q9U2 264 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Lztfl1Q9JHQ5 299 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Top2aQ01320 1528 aaKnown RBP10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 GpkowQ56A08 488 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Taok1Q5F2E8 1001 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Sun3Q5SS91 320 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Asic3Q6X1Y6 530 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Haus1Q8BHX1 278 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Tmco4Q91WU4 631 aa10.52□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Gm6583E9Q8Z1 469 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Gm10378F6XQQ1 160 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Msl1Q6PDM1 616 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Rapgef3Q8VCC8 918 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Tcerg1lQ3B807 590 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Pcdhb2Q91Y00 799 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Stx12Q9ER00 274 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 AmfrQ9R049 643 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Heatr4E9Q357 955 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 ChkbO55229 394 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Pja2Q80U04 707 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Gimap6Q8K349 305 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Taf12Q8VE65 161 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Cfap73J3QPZ5 306 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ubash3aQ3V3E1 624 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Cavin2Q63918 418 aaKnown RBP10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ppp2r1aQ76MZ3 589 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Depdc1bQ8BH88 529 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ces1aE9PYP1 563 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Atp2b3Q0VF55 1220 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Fsip1Q9D3V5 435 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Rps6ka2Q9WUT3 733 aa10.51□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ccdc175E9PVB3 822 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ccdc114Q3UX62 658 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Rasa1E9PYG6 1038 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Capn2O08529 700 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Q8R1Y2 203 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Brd1E9PZ26 1189 aaKnown RBP10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Eef1bO70251 225 aaKnown RBP10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 SbdsP70122 250 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Zfp444Q3TDV8 331 aaKnown RBP10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Map3k11Q80XI6 850 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Adcy3Q8VHH7 1145 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Arhgap5P97393 1501 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Mum1Q6DID5 682 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Kif11Q6P9P6 1052 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Trim7Q923T7 510 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 HgsQ99LI8 775 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Gm28043E0CXC2 719 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Speer4dL7N216 212 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ice2Q3UZ18 988 aaKnown RBP10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Map4k4P97820 1233 aaKnown RBP10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Stk38lQ7TSE6 464 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Atp6v0a4Q920R6 833 aa10.5□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Trove2O08848 538 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 ApobrQ8VBT6 942 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ttc21aQ8C0S4 1314 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 PhexP70669 749 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Gm136Q3V037 328 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Stac3Q8BZ71 360 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 TkfcQ8VC30 578 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 FibpQ9JI19 357 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Tmod2Q9JKK7 351 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 AticQ9CWJ9 592 aaKnown RBP10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 P4ha1Q60715 534 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ttc4Q8R3H9 386 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Mgea5Q9EQQ9 916 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Bag3Q9JLV1 577 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 123.8 ms