Protein–RNA interactions for Protein: P50518

Atp6v1e1, V-type proton ATPase subunit E 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1e1P50518 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Atp6v1e1P50518 Gm25239-201ENSMUST00000174915 86 ntBASIC30.98■■■□□ 2.55
Atp6v1e1P50518 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Atp6v1e1P50518 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
Atp6v1e1P50518 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Atp6v1e1P50518 Psd-208ENSMUST00000224556 2034 ntBASIC29.13■■■□□ 2.25
Atp6v1e1P50518 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Atp6v1e1P50518 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Atp6v1e1P50518 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Atp6v1e1P50518 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Atp6v1e1P50518 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Atp6v1e1P50518 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Atp6v1e1P50518 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Atp6v1e1P50518 Gm15042-201ENSMUST00000120212 883 ntBASIC27.92■■■□□ 2.06
Atp6v1e1P50518 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Atp6v1e1P50518 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Atp6v1e1P50518 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.73■■■□□ 2.03
Atp6v1e1P50518 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Atp6v1e1P50518 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Atp6v1e1P50518 Gm15045-201ENSMUST00000117359 883 ntBASIC27.37■■□□□ 1.97
Atp6v1e1P50518 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Atp6v1e1P50518 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Atp6v1e1P50518 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Atp6v1e1P50518 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Atp6v1e1P50518 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Atp6v1e1P50518 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Atp6v1e1P50518 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Atp6v1e1P50518 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Atp6v1e1P50518 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Atp6v1e1P50518 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
Atp6v1e1P50518 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Atp6v1e1P50518 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Atp6v1e1P50518 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.82■■□□□ 1.88
Atp6v1e1P50518 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Atp6v1e1P50518 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Atp6v1e1P50518 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.76■■□□□ 1.88
Atp6v1e1P50518 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.64■■□□□ 1.85
Atp6v1e1P50518 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Atp6v1e1P50518 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Atp6v1e1P50518 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Atp6v1e1P50518 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.47■■□□□ 1.83
Atp6v1e1P50518 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Atp6v1e1P50518 Gm24109-201ENSMUST00000175489 103 ntBASIC26.39■■□□□ 1.82
Atp6v1e1P50518 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Atp6v1e1P50518 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Atp6v1e1P50518 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.32■■□□□ 1.8
Atp6v1e1P50518 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atp6v1e1P50518 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Atp6v1e1P50518 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
Atp6v1e1P50518 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.22■■□□□ 1.79
Atp6v1e1P50518 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Atp6v1e1P50518 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.13■■□□□ 1.77
Atp6v1e1P50518 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Atp6v1e1P50518 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Atp6v1e1P50518 Gm23366-201ENSMUST00000175022 89 ntBASIC26.03■■□□□ 1.76
Atp6v1e1P50518 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Atp6v1e1P50518 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Atp6v1e1P50518 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Atp6v1e1P50518 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Atp6v1e1P50518 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Atp6v1e1P50518 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Atp6v1e1P50518 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Atp6v1e1P50518 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Atp6v1e1P50518 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Atp6v1e1P50518 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Atp6v1e1P50518 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Atp6v1e1P50518 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Atp6v1e1P50518 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.71■■□□□ 1.71
Atp6v1e1P50518 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.71■■□□□ 1.71
Atp6v1e1P50518 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Atp6v1e1P50518 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Atp6v1e1P50518 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Atp6v1e1P50518 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
Atp6v1e1P50518 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Atp6v1e1P50518 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Atp6v1e1P50518 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Atp6v1e1P50518 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Atp6v1e1P50518 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Atp6v1e1P50518 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Atp6v1e1P50518 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Atp6v1e1P50518 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Atp6v1e1P50518 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Atp6v1e1P50518 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Atp6v1e1P50518 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Atp6v1e1P50518 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.16■■□□□ 1.62
Atp6v1e1P50518 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Atp6v1e1P50518 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Atp6v1e1P50518 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Atp6v1e1P50518 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Atp6v1e1P50518 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atp6v1e1P50518 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Atp6v1e1P50518 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Atp6v1e1P50518 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Atp6v1e1P50518 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Atp6v1e1P50518 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Atp6v1e1P50518 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Atp6v1e1P50518 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.89■■□□□ 1.57
Atp6v1e1P50518 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atp6v1e1P50518 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Atp6v1e1P50518 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms