Protein–RNA interactions for Protein: P50518

Atp6v1e1, V-type proton ATPase subunit E 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1e1P50518 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,58
Atp6v1e1P50518 Gm25239-201ENSMUST00000174915 86 ntBASIC30,98■■■□□ 2,55
Atp6v1e1P50518 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30,09■■■□□ 2,41
Atp6v1e1P50518 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30,06■■■□□ 2,4
Atp6v1e1P50518 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29,35■■■□□ 2,29
Atp6v1e1P50518 Psd-208ENSMUST00000224556 2034 ntBASIC29,13■■■□□ 2,25
Atp6v1e1P50518 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Atp6v1e1P50518 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Atp6v1e1P50518 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28,35■■■□□ 2,13
Atp6v1e1P50518 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28,23■■■□□ 2,11
Atp6v1e1P50518 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28,03■■■□□ 2,08
Atp6v1e1P50518 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
Atp6v1e1P50518 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27,97■■■□□ 2,07
Atp6v1e1P50518 Gm15042-201ENSMUST00000120212 883 ntBASIC27,92■■■□□ 2,06
Atp6v1e1P50518 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27,89■■■□□ 2,06
Atp6v1e1P50518 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27,8■■■□□ 2,04
Atp6v1e1P50518 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27,73■■■□□ 2,03
Atp6v1e1P50518 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,4■■□□□ 1,98
Atp6v1e1P50518 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27,39■■□□□ 1,97
Atp6v1e1P50518 Gm15045-201ENSMUST00000117359 883 ntBASIC27,37■■□□□ 1,97
Atp6v1e1P50518 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27,32■■□□□ 1,96
Atp6v1e1P50518 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27,21■■□□□ 1,95
Atp6v1e1P50518 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27,2■■□□□ 1,95
Atp6v1e1P50518 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,14■■□□□ 1,94
Atp6v1e1P50518 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26,96■■□□□ 1,91
Atp6v1e1P50518 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26,96■■□□□ 1,91
Atp6v1e1P50518 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26,94■■□□□ 1,9
Atp6v1e1P50518 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26,9■■□□□ 1,9
Atp6v1e1P50518 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Atp6v1e1P50518 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26,88■■□□□ 1,89
Atp6v1e1P50518 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26,85■■□□□ 1,89
Atp6v1e1P50518 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26,83■■□□□ 1,88
Atp6v1e1P50518 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26,82■■□□□ 1,88
Atp6v1e1P50518 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26,81■■□□□ 1,88
Atp6v1e1P50518 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26,81■■□□□ 1,88
Atp6v1e1P50518 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26,76■■□□□ 1,88
Atp6v1e1P50518 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26,64■■□□□ 1,85
Atp6v1e1P50518 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Atp6v1e1P50518 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,55■■□□□ 1,84
Atp6v1e1P50518 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26,52■■□□□ 1,84
Atp6v1e1P50518 Gm10524-201ENSMUST00000181931 1893 ntBASIC26,47■■□□□ 1,83
Atp6v1e1P50518 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26,42■■□□□ 1,82
Atp6v1e1P50518 Gm24109-201ENSMUST00000175489 103 ntBASIC26,39■■□□□ 1,82
Atp6v1e1P50518 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Atp6v1e1P50518 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Atp6v1e1P50518 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,32■■□□□ 1,8
Atp6v1e1P50518 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26,31■■□□□ 1,8
Atp6v1e1P50518 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26,26■■□□□ 1,79
Atp6v1e1P50518 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26,24■■□□□ 1,79
Atp6v1e1P50518 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26,22■■□□□ 1,79
Atp6v1e1P50518 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26,2■■□□□ 1,79
Atp6v1e1P50518 Gm42596-201ENSMUST00000196305 1958 ntBASIC26,13■■□□□ 1,77
Atp6v1e1P50518 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26,13■■□□□ 1,77
Atp6v1e1P50518 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26,06■■□□□ 1,76
Atp6v1e1P50518 Gm23366-201ENSMUST00000175022 89 ntBASIC26,03■■□□□ 1,76
Atp6v1e1P50518 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25,98■■□□□ 1,75
Atp6v1e1P50518 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25,95■■□□□ 1,74
Atp6v1e1P50518 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25,92■■□□□ 1,74
Atp6v1e1P50518 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Atp6v1e1P50518 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25,83■■□□□ 1,73
Atp6v1e1P50518 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Atp6v1e1P50518 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25,81■■□□□ 1,72
Atp6v1e1P50518 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25,81■■□□□ 1,72
Atp6v1e1P50518 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25,78■■□□□ 1,72
Atp6v1e1P50518 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25,78■■□□□ 1,72
Atp6v1e1P50518 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Atp6v1e1P50518 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25,76■■□□□ 1,71
Atp6v1e1P50518 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,71■■□□□ 1,71
Atp6v1e1P50518 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25,71■■□□□ 1,71
Atp6v1e1P50518 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25,67■■□□□ 1,7
Atp6v1e1P50518 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25,62■■□□□ 1,69
Atp6v1e1P50518 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Atp6v1e1P50518 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25,54■■□□□ 1,68
Atp6v1e1P50518 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25,54■■□□□ 1,68
Atp6v1e1P50518 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Atp6v1e1P50518 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25,47■■□□□ 1,67
Atp6v1e1P50518 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Atp6v1e1P50518 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Atp6v1e1P50518 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Atp6v1e1P50518 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25,38■■□□□ 1,65
Atp6v1e1P50518 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25,36■■□□□ 1,65
Atp6v1e1P50518 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25,3■■□□□ 1,64
Atp6v1e1P50518 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Atp6v1e1P50518 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25,23■■□□□ 1,63
Atp6v1e1P50518 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25,16■■□□□ 1,62
Atp6v1e1P50518 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Atp6v1e1P50518 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25,14■■□□□ 1,62
Atp6v1e1P50518 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25,1■■□□□ 1,61
Atp6v1e1P50518 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25,06■■□□□ 1,6
Atp6v1e1P50518 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24,99■■□□□ 1,59
Atp6v1e1P50518 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24,99■■□□□ 1,59
Atp6v1e1P50518 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24,94■■□□□ 1,58
Atp6v1e1P50518 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24,94■■□□□ 1,58
Atp6v1e1P50518 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24,92■■□□□ 1,58
Atp6v1e1P50518 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24,92■■□□□ 1,58
Atp6v1e1P50518 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24,91■■□□□ 1,58
Atp6v1e1P50518 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24,89■■□□□ 1,57
Atp6v1e1P50518 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24,86■■□□□ 1,57
Atp6v1e1P50518 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24,85■■□□□ 1,57
Atp6v1e1P50518 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24,82■■□□□ 1,56
Retrieved 100 of 76,532 protein–RNA pairs in 10,7 ms