RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Terf2ipQ91VL8 393 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Rnf216P58283 853 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Wdhd1P59328 1117 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Dact3Q0PHV7 610 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Cnnm2Q3TWN3 875 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Map3k11Q80XI6 850 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Uso1Q9Z1Z0 959 aaKnown RBP10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ube3aO08759 870 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ier5O89113 308 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Acnat2Q8BGG9 420 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Mlh1Q9JK91 760 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Znf394Q9Z1D9 521 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Gapvd1Q6PAR5 1458 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Gm28510A0A087WP28 240 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tex13c2A0A0G2JGA3 530 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Samd15F6XZJ7 620 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Mindy4Q3UQI9 744 aa10.64□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tmem94Q7TSH8 1360 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 DlatQ8BMF4 642 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Kdm2bQ6P1G2 1309 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ncoa3O09000 1398 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Gm7347D3YYI9 267 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ccdc121E9Q6D3 323 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ptgs1P22437 602 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Mapkbp1Q6NS57 1503 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ces1aE9PYP1 563 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Eif4a2P10630 407 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Atp2b3Q0VF55 1220 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Cavin2Q63918 418 aaKnown RBP10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Fam160b2Q80YR2 744 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Gramd4Q8CB44 633 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Atp8b3Q6UQ17 1335 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Gm10378F6XQQ1 160 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 MarcksP26645 309 aaKnown RBP10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Mnat1P51949 309 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Pde4dQ01063 747 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 L1td1Q587J6 782 aaKnown RBP10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ublcp1Q8BGR9 318 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Bicd1Q8BR07 835 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Farp2Q91VS8 1065 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Nip7Q9CXK8 180 aaKnown RBP10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Taf7Q9R1C0 341 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Myl3P09542 204 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 ArsiQ32KI9 573 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Fermt2Q8CIB5 680 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Rtn1Q8K0T0 780 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Prim1P20664 417 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Plcd1Q8R3B1 756 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Lztfl1Q9JHQ5 299 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Irx4Q9QY61 515 aa10.63□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Supt6hQ62383 1726 aaKnown RBP10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Akr1c19G3X9Y6 323 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Serpinc1P32261 465 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Atp1a2Q6PIE5 1020 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ubxn1Q922Y1 297 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Usp11Q99K46 921 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Gbp1Q01514 589 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Igbp1Q61249 340 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Asic3Q6X1Y6 530 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ift74Q8BKE9 600 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Aldh1l2Q8K009 923 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Efcab2Q9CQ46 164 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ppp4r3aQ6P2K6 820 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Cplx4Q80WM3 160 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Cep19Q9CQA8 163 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Atp1a4Q9WV27 1032 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Sec62Q8BU14 398 aaKnown RBP10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Fam114a1Q9D281 569 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Mug2P28666 1451 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Nek11Q8C0Q4 628 aa10.62□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Hoxb7P09024 217 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Utp18Q5SSI6 552 aaKnown RBP10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Rasal2E9PW37 1286 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Psmd1Q3TXS7 953 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Pex1Q5BL07 1284 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 BrapQ99MP8 591 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 MthfsQ9D110 203 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Cyp27a1Q9DBG1 533 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Zfp213E9QAW0 468 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Opa1P58281 960 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ccdc25Q78PG9 208 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Capn12Q9ER56 720 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Rlbp1Q9Z275 317 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ankrd50F7BE84 1390 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Znf568E9PYI1 671 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Lrrc2Q8VDB8 371 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Atp12aQ9Z1W8 1035 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tubb4bP68372 445 aaKnown RBP10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Znf18Q810A1 556 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Rdm1Q9CQK3 281 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Lonp2Q9DBN5 852 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Gm45015A0A140LII9 184 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Ehbp1Q69ZW3 1231 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Six6os1Q9CTN5 574 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Tmco5aQ9D9D5 303 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Elf2Q9JHC9 593 aa10.61□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Dzip1Q8BMD2 852 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Kdm4cQ8VCD7 1054 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Naip7Q9JIB3 1402 aa10.6□□□□□ -0.71
Prpf40a-201ENSMUST00000076313 Naip6Q9JIB6 1403 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms