RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Fndc9Q8BJN4 226 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Gpr22Q8BZL4 432 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Wwp1Q8BZZ3 918 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Elfn1Q8C8T7 828 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 C1ql2Q8CFR0 287 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 FlcnQ8QZS3 579 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Stk32cQ8QZV4 488 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Olfr1100Q8VFM1 321 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Nprl3Q8VIJ8 569 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Sf3b5Q923D4 86 aaKnown RBP10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Scrt1Q99M85 348 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Mgst3Q9CPU4 153 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Chmp1b2Q9CQD4 199 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Tm7sf3Q9CRG1 565 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Mrps28Q9CY16 186 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Dnase1l2Q9D1G0 278 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Adad2Q9D5P4 478 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Spaca1Q9DA48 305 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Entpd4Q9DBT4 613 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Trim2Q9ESN6 744 aaKnown RBP10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 NgfrQ9Z0W1 417 aa10.78□□□□□ -0.68
Ccdc28a-202ENSMUST00000080860 Gm20219A0A1B0GRQ3 87 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Zfp969A2ART2 485 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Zfp973A2BE20 318 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Phf11cB4XVP9 339 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Vmn1r238E9Q373 306 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Gm5407E9Q7Q1 248 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Vmn2r109K7N747 858 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 E2f6O54917 272 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 En1P09065 401 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Hoxa6P09092 232 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Irf2P23906 349 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Apoa1Q00623 264 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Tcfl5Q32NY8 489 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Tax1bp1Q3UKC1 814 aaKnown RBP10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 B3gnt6Q3USF0 391 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Zfp872Q3UVL3 465 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Tle4Q62441 773 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Ptk6Q64434 451 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Nqo1Q64669 274 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Orai3Q6P8G8 290 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 JkampQ8BI36 311 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Slc25a21Q8BZ09 298 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Ifnl3Q8CGK6 193 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 ManbaQ8K2I4 879 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Kctd11Q8K485 232 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Trib3Q8K4K2 354 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Myoz3Q8R4E4 245 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Pcdh18Q8VHR0 1134 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Ints11Q9CWS4 600 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Ddx28Q9CWT6 540 aaKnown RBP10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Upk1aQ9D132 257 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Gid8Q9D7M1 228 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Mrpl46Q9EQI8 283 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Cryba2Q9JJV1 197 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Nectin3Q9JLB9 549 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 St6galnac1Q9QZ39 526 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Avpr1bQ9WU02 421 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Spint2Q9WU03 252 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 CtszQ9WUU7 306 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 MtorQ9JLN9 2549 aa10.77□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Ros1Q78DX7 2340 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 OtogO55225 2910 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Gm10358A0A1D5RLD8 333 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Olfr228A0A1L1SR98 313 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Zfp534A2A7A1 661 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Olfr1032A2ATE5 310 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Ccdc9bA3KGF9 545 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Cldn24D3YXJ9 220 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Zfp945E9PYM8 794 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Vmn2r48E9Q5D8 855 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Mcpt9O35164 246 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Hmgn2P09602 90 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 PahP16331 453 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 GapdhP16858 333 aaKnown RBP10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Hsf2P38533 535 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Cbr1P48758 277 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Aqp4P55088 323 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Atp6v1b2P62814 511 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Nkpd1Q0VF94 599 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Defb20Q30KP3 96 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Cnep1r1Q3UJ81 125 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Tas2r109Q7M707 316 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Katnb1Q8BG40 658 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Guca1bQ8VBV8 201 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Olfr788Q8VFI0 311 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Golm1Q91XA2 393 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Rnf167Q91XF4 347 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Slco1a6Q99J94 670 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Tnip2Q99JG7 430 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 9230110F15RikQ9D262 117 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 4930513O06RikQ9D549 161 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 SlirpQ9D8T7 112 aaKnown RBP10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Tmem176aQ9DCS1 244 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Olfr961Q9EQ84 314 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Ropn1Q9ESG2 212 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Gal3st1Q9JHE4 423 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Clec4eQ9R0Q8 214 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Gm3839S4R1W1 333 aa10.76□□□□□ -0.69
Ccdc28a-202ENSMUST00000080860 Heatr5aQ5PRF0 2038 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms