Protein–RNA interactions for Protein: P09602

Hmgn2, Non-histone chromosomal protein HMG-17, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn2P09602 Gm25239-201ENSMUST00000174915 86 ntBASIC33,03■■■□□ 2,88
Hmgn2P09602 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31,01■■■□□ 2,55
Hmgn2P09602 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30,3■■■□□ 2,44
Hmgn2P09602 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30,16■■■□□ 2,42
Hmgn2P09602 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29,96■■■□□ 2,39
Hmgn2P09602 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Hmgn2P09602 Gm15042-201ENSMUST00000120212 883 ntBASIC29,36■■■□□ 2,29
Hmgn2P09602 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,86■■■□□ 2,21
Hmgn2P09602 Psd-208ENSMUST00000224556 2034 ntBASIC28,81■■■□□ 2,2
Hmgn2P09602 Gm15045-201ENSMUST00000117359 883 ntBASIC28,78■■■□□ 2,2
Hmgn2P09602 Gm24109-201ENSMUST00000175489 103 ntBASIC28,39■■■□□ 2,14
Hmgn2P09602 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28,34■■■□□ 2,13
Hmgn2P09602 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,29■■■□□ 2,12
Hmgn2P09602 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,28■■■□□ 2,12
Hmgn2P09602 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28,23■■■□□ 2,11
Hmgn2P09602 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27,84■■■□□ 2,05
Hmgn2P09602 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27,81■■■□□ 2,04
Hmgn2P09602 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27,73■■■□□ 2,03
Hmgn2P09602 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27,73■■■□□ 2,03
Hmgn2P09602 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,73■■■□□ 2,03
Hmgn2P09602 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,7■■■□□ 2,03
Hmgn2P09602 Gm23366-201ENSMUST00000175022 89 ntBASIC27,67■■■□□ 2,02
Hmgn2P09602 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27,65■■■□□ 2,02
Hmgn2P09602 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27,61■■■□□ 2,01
Hmgn2P09602 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,58■■■□□ 2,01
Hmgn2P09602 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27,56■■■□□ 2
Hmgn2P09602 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27,55■■■□□ 2
Hmgn2P09602 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27,52■■■□□ 2
Hmgn2P09602 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27,49■■□□□ 1,99
Hmgn2P09602 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,4■■□□□ 1,98
Hmgn2P09602 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27,34■■□□□ 1,97
Hmgn2P09602 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27,31■■□□□ 1,96
Hmgn2P09602 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27,24■■□□□ 1,95
Hmgn2P09602 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,2■■□□□ 1,95
Hmgn2P09602 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27,15■■□□□ 1,94
Hmgn2P09602 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27■■□□□ 1,91
Hmgn2P09602 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1,91
Hmgn2P09602 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26,95■■□□□ 1,9
Hmgn2P09602 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,86■■□□□ 1,89
Hmgn2P09602 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26,81■■□□□ 1,88
Hmgn2P09602 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,75■■□□□ 1,87
Hmgn2P09602 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,75■■□□□ 1,87
Hmgn2P09602 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Hmgn2P09602 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26,53■■□□□ 1,84
Hmgn2P09602 Gm10524-201ENSMUST00000181931 1893 ntBASIC26,49■■□□□ 1,83
Hmgn2P09602 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Hmgn2P09602 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26,45■■□□□ 1,82
Hmgn2P09602 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Hmgn2P09602 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26,24■■□□□ 1,79
Hmgn2P09602 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26,23■■□□□ 1,79
Hmgn2P09602 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26,23■■□□□ 1,79
Hmgn2P09602 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
Hmgn2P09602 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,14■■□□□ 1,77
Hmgn2P09602 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
Hmgn2P09602 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26,1■■□□□ 1,77
Hmgn2P09602 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25,99■■□□□ 1,75
Hmgn2P09602 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25,97■■□□□ 1,75
Hmgn2P09602 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25,97■■□□□ 1,75
Hmgn2P09602 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Hmgn2P09602 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25,96■■□□□ 1,75
Hmgn2P09602 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25,93■■□□□ 1,74
Hmgn2P09602 Gm25238-201ENSMUST00000174914 89 ntBASIC25,9■■□□□ 1,74
Hmgn2P09602 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25,87■■□□□ 1,73
Hmgn2P09602 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25,86■■□□□ 1,73
Hmgn2P09602 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25,86■■□□□ 1,73
Hmgn2P09602 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25,86■■□□□ 1,73
Hmgn2P09602 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25,85■■□□□ 1,73
Hmgn2P09602 Gm42596-201ENSMUST00000196305 1958 ntBASIC25,82■■□□□ 1,72
Hmgn2P09602 Gm27325-201ENSMUST00000175467 74 ntBASIC25,82■■□□□ 1,72
Hmgn2P09602 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25,8■■□□□ 1,72
Hmgn2P09602 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Hmgn2P09602 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25,7■■□□□ 1,7
Hmgn2P09602 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25,64■■□□□ 1,7
Hmgn2P09602 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25,63■■□□□ 1,69
Hmgn2P09602 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25,61■■□□□ 1,69
Hmgn2P09602 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25,59■■□□□ 1,69
Hmgn2P09602 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Hmgn2P09602 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25,48■■□□□ 1,67
Hmgn2P09602 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25,45■■□□□ 1,66
Hmgn2P09602 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Hmgn2P09602 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25,41■■□□□ 1,66
Hmgn2P09602 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Hmgn2P09602 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25,39■■□□□ 1,65
Hmgn2P09602 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Hmgn2P09602 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25,35■■□□□ 1,65
Hmgn2P09602 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Hmgn2P09602 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Hmgn2P09602 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Hmgn2P09602 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25,27■■□□□ 1,64
Hmgn2P09602 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25,27■■□□□ 1,64
Hmgn2P09602 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Hmgn2P09602 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25,22■■□□□ 1,63
Hmgn2P09602 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Hmgn2P09602 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25,19■■□□□ 1,62
Hmgn2P09602 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,19■■□□□ 1,62
Hmgn2P09602 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Hmgn2P09602 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25,12■■□□□ 1,61
Hmgn2P09602 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25,11■■□□□ 1,61
Hmgn2P09602 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25,09■■□□□ 1,61
Hmgn2P09602 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms