Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 Gm25239-201ENSMUST00000174915 86 ntBASIC33.16■■■□□ 2.9
Gm3839S4R1W1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Gm3839S4R1W1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Gm3839S4R1W1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Gm3839S4R1W1 Gm15042-201ENSMUST00000120212 883 ntBASIC29.3■■■□□ 2.28
Gm3839S4R1W1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Gm3839S4R1W1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
Gm3839S4R1W1 Gm15045-201ENSMUST00000117359 883 ntBASIC28.67■■■□□ 2.18
Gm3839S4R1W1 Gm24109-201ENSMUST00000175489 103 ntBASIC28.58■■■□□ 2.17
Gm3839S4R1W1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Gm3839S4R1W1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Gm3839S4R1W1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Gm3839S4R1W1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Gm3839S4R1W1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Gm3839S4R1W1 Gm23366-201ENSMUST00000175022 89 ntBASIC27.78■■■□□ 2.04
Gm3839S4R1W1 Psd-208ENSMUST00000224556 2034 ntBASIC27.73■■■□□ 2.03
Gm3839S4R1W1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.7■■■□□ 2.02
Gm3839S4R1W1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Gm3839S4R1W1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Gm3839S4R1W1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Gm3839S4R1W1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Gm3839S4R1W1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Gm3839S4R1W1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Gm3839S4R1W1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Gm3839S4R1W1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Gm3839S4R1W1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
Gm3839S4R1W1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Gm3839S4R1W1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Gm3839S4R1W1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.04■■□□□ 1.92
Gm3839S4R1W1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Gm3839S4R1W1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Gm3839S4R1W1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.87■■□□□ 1.89
Gm3839S4R1W1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Gm3839S4R1W1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.68■■□□□ 1.86
Gm3839S4R1W1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Gm3839S4R1W1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Gm3839S4R1W1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.42■■□□□ 1.82
Gm3839S4R1W1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
Gm3839S4R1W1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Gm3839S4R1W1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.23■■□□□ 1.79
Gm3839S4R1W1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Gm3839S4R1W1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Gm3839S4R1W1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Gm3839S4R1W1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Gm3839S4R1W1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Gm3839S4R1W1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Gm3839S4R1W1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.06■■□□□ 1.76
Gm3839S4R1W1 Gm25238-201ENSMUST00000174914 89 ntBASIC26.06■■□□□ 1.76
Gm3839S4R1W1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Gm3839S4R1W1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Gm3839S4R1W1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Gm3839S4R1W1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.89■■□□□ 1.74
Gm3839S4R1W1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Gm3839S4R1W1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Gm3839S4R1W1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Gm3839S4R1W1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Gm3839S4R1W1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Gm3839S4R1W1 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.73■■□□□ 1.71
Gm3839S4R1W1 Gm27325-201ENSMUST00000175467 74 ntBASIC25.71■■□□□ 1.71
Gm3839S4R1W1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.67■■□□□ 1.7
Gm3839S4R1W1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
Gm3839S4R1W1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Gm3839S4R1W1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Gm3839S4R1W1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Gm3839S4R1W1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.54■■□□□ 1.68
Gm3839S4R1W1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Gm3839S4R1W1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Gm3839S4R1W1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Gm3839S4R1W1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Gm3839S4R1W1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Gm3839S4R1W1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.37■■□□□ 1.65
Gm3839S4R1W1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Gm3839S4R1W1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Gm3839S4R1W1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.34■■□□□ 1.65
Gm3839S4R1W1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Gm3839S4R1W1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.31■■□□□ 1.64
Gm3839S4R1W1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Gm3839S4R1W1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gm3839S4R1W1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Gm3839S4R1W1 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.2■■□□□ 1.62
Gm3839S4R1W1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
Gm3839S4R1W1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Gm3839S4R1W1 Rab21-202ENSMUST00000218831 843 ntBASIC25.08■■□□□ 1.61
Gm3839S4R1W1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.08■■□□□ 1.61
Gm3839S4R1W1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Gm3839S4R1W1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Gm3839S4R1W1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Gm3839S4R1W1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.95■■□□□ 1.58
Gm3839S4R1W1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Gm3839S4R1W1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.91■■□□□ 1.58
Gm3839S4R1W1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Gm3839S4R1W1 Gm25262-201ENSMUST00000174934 133 ntBASIC24.85■■□□□ 1.57
Gm3839S4R1W1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Gm3839S4R1W1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Gm3839S4R1W1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Gm3839S4R1W1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Gm3839S4R1W1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Gm3839S4R1W1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.79■■□□□ 1.56
Gm3839S4R1W1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Gm3839S4R1W1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms