RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 NAT1P12945 854 aaKnown RBP-0.63□□□□□ -2.51
snR40snR40 YMC2P38087 329 aa-0.63□□□□□ -2.51
snR40snR40 AVT5P38176 459 aa-0.63□□□□□ -2.51
snR40snR40 YBR184WP38299 523 aa-0.63□□□□□ -2.51
snR40snR40 GIC1P38785 314 aa-0.63□□□□□ -2.51
snR40snR40 MTG2P38860 518 aa-0.63□□□□□ -2.51
snR40snR40 PTH1P38876 190 aaKnown RBP-0.63□□□□□ -2.51
snR40snR40 MXR1P40029 184 aa-0.63□□□□□ -2.51
snR40snR40 VRG4P40107 337 aa-0.63□□□□□ -2.51
snR40snR40 HOS4P40480 1083 aa-0.63□□□□□ -2.51
snR40snR40 DUS1P53759 423 aaKnown RBP-0.63□□□□□ -2.51
snR40snR40 GNT1Q12096 491 aa-0.63□□□□□ -2.51
snR40snR40 SWM1Q12379 170 aa-0.63□□□□□ -2.51
snR40snR40 SRO77P38163 1010 aa-0.64□□□□□ -2.51
snR40snR40 PEX28P38848 579 aa-0.64□□□□□ -2.51
snR40snR40 MIT1P40002 666 aa-0.64□□□□□ -2.51
snR40snR40 IDP3P53982 420 aaKnown RBP-0.64□□□□□ -2.51
snR40snR40 YLR352WQ06479 807 aa-0.64□□□□□ -2.51
snR40snR40 YRM1Q12340 786 aa-0.64□□□□□ -2.51
snR40snR40 PHO5P00635 467 aa-0.65□□□□□ -2.51
snR40snR40 PRP4P20053 465 aaKnown RBP-0.65□□□□□ -2.51
snR40snR40 FUB1P25659 250 aa-0.65□□□□□ -2.51
snR40snR40 CPR3P25719 182 aa-0.65□□□□□ -2.51
snR40snR40 GMH1P36125 273 aa-0.65□□□□□ -2.51
snR40snR40 TGL4P36165 910 aa-0.65□□□□□ -2.51
snR40snR40 TSL1P38427 1098 aaKnown RBP-0.65□□□□□ -2.51
snR40snR40 YJL007CP47080 104 aa-0.65□□□□□ -2.51
snR40snR40 RSM26P47141 266 aa-0.65□□□□□ -2.51
snR40snR40 ASN1P49089 572 aaKnown RBP-0.65□□□□□ -2.51
snR40snR40 YGL140CP53120 1219 aa-0.65□□□□□ -2.51
snR40snR40 BOP3P53958 396 aa-0.65□□□□□ -2.51
snR40snR40 DED1P06634 604 aaKnown RBP-0.66□□□□□ -2.52
snR40snR40 RPL11AP0C0W9 174 aaKnown RBP-0.66□□□□□ -2.52
snR40snR40 KCC4P25389 1037 aa-0.66□□□□□ -2.52
snR40snR40 PET112P33893 541 aa-0.66□□□□□ -2.52
snR40snR40 REV7P38927 245 aa-0.66□□□□□ -2.52
snR40snR40 SDP1P40479 209 aa-0.66□□□□□ -2.52
snR40snR40 RPL15BP54780 204 aaPredicted RBP-0.66□□□□□ -2.52
snR40snR40 UFD2P54860 961 aa-0.66□□□□□ -2.52
snR40snR40 CWC15Q03772 175 aaKnown RBP-0.66□□□□□ -2.52
snR40snR40 RPL11BQ3E757 174 aaPredicted RBP-0.66□□□□□ -2.52
snR40snR40 YKL033W-AQ86ZR7 236 aa-0.66□□□□□ -2.52
snR40snR40 FBP1P09201 348 aa-0.67□□□□□ -2.52
snR40snR40 DBP2P24783 546 aaKnown RBP-0.67□□□□□ -2.52
snR40snR40 MLS1P30952 554 aa-0.67□□□□□ -2.52
snR40snR40 FUN30P31380 1131 aa-0.67□□□□□ -2.52
snR40snR40 MDV1P47025 714 aa-0.67□□□□□ -2.52
snR40snR40 YNL011CP53980 444 aa-0.67□□□□□ -2.52
snR40snR40 ARG7Q04728 441 aa-0.67□□□□□ -2.52
snR40snR40 PNP1Q05788 311 aa-0.67□□□□□ -2.52
snR40snR40 CBS2P14905 389 aa-0.68□□□□□ -2.52
snR40snR40 AIM17P23180 465 aaKnown RBP-0.68□□□□□ -2.52
snR40snR40 SQT1P35184 431 aa-0.68□□□□□ -2.52
snR40snR40 YIL024CP40543 189 aa-0.68□□□□□ -2.52
snR40snR40 SPG5P42933 373 aa-0.68□□□□□ -2.52
snR40snR40 SRT1Q03175 343 aa-0.68□□□□□ -2.52
snR40snR40 DSE3Q08729 430 aa-0.68□□□□□ -2.52
snR40snR40 PUF2Q12221 1075 aaKnown RBP RIP-Chip data-0.68□□□□□ -2.52not detected
snR40snR40 YEL1P34225 687 aa-0.69□□□□□ -2.52
snR40snR40 OCT1P35999 772 aa-0.69□□□□□ -2.52
snR40snR40 PRE5P40302 234 aaKnown RBP-0.69□□□□□ -2.52
snR40snR40 YIR016WP40572 265 aa-0.69□□□□□ -2.52
snR40snR40 THI6P41835 540 aa-0.69□□□□□ -2.52
snR40snR40 RAI1P53063 387 aaKnown RBP-0.69□□□□□ -2.52
snR40snR40 FHN1P53279 174 aa-0.69□□□□□ -2.52
snR40snR40 RBG2P53295 368 aaKnown RBP-0.69□□□□□ -2.52
snR40snR40 YCS4Q06156 1176 aa-0.69□□□□□ -2.52
snR40snR40 MDM38Q08179 573 aa-0.69□□□□□ -2.52
snR40snR40 YLL058WQ12198 575 aa-0.69□□□□□ -2.52
snR40snR40 TIP41Q12199 356 aa-0.69□□□□□ -2.52
snR40snR40 CCH1P50077 2039 aa-0.7□□□□□ -2.52
snR40snR40 URE2P23202 354 aaKnown RBP-0.7□□□□□ -2.52
snR40snR40 AAD3P25612 363 aa-0.7□□□□□ -2.52
snR40snR40 BMT2P38278 337 aa-0.7□□□□□ -2.52
snR40snR40 GND1P38720 489 aaKnown RBP-0.7□□□□□ -2.52
snR40snR40 CTF8P38877 133 aa-0.7□□□□□ -2.52
snR40snR40 KRE9P39005 276 aa-0.7□□□□□ -2.52
snR40snR40 IRR1P40541 1150 aa-0.7□□□□□ -2.52
snR40snR40 CFD1P40558 293 aa-0.7□□□□□ -2.52
snR40snR40 BAP3P41815 604 aa-0.7□□□□□ -2.52
snR40snR40 SAD1P43589 448 aa-0.7□□□□□ -2.52
snR40snR40 PAN2P53010 1115 aaPredicted RBP-0.7□□□□□ -2.52
snR40snR40 CTK1Q03957 528 aaKnown RBP-0.7□□□□□ -2.52
snR40snR40 UBX3Q12229 455 aa-0.7□□□□□ -2.52
snR40snR40 ATG11Q12527 1178 aa-0.7□□□□□ -2.52
snR40snR40 TPK2P06245 380 aa-0.71□□□□□ -2.52
snR40snR40 YMR085WP0CF18 432 aa-0.71□□□□□ -2.52
snR40snR40 MRPL9P31334 269 aa-0.71□□□□□ -2.52
snR40snR40 RPC82P32349 654 aa-0.71□□□□□ -2.52
snR40snR40 MKK2P32491 506 aa-0.71□□□□□ -2.52
snR40snR40 SFB3P38810 929 aa-0.71□□□□□ -2.52
snR40snR40 SPC98P53540 846 aa-0.71□□□□□ -2.52
snR40snR40 NRG1Q03125 231 aa-0.71□□□□□ -2.52
snR40snR40 SSL1Q04673 461 aaPredicted RBP-0.71□□□□□ -2.52
snR40snR40 MNL2Q12205 849 aa-0.71□□□□□ -2.52
snR40snR40 CPS1P27614 576 aa-0.72□□□□□ -2.52
snR40snR40 PHO11P35842 467 aa-0.72□□□□□ -2.52
snR40snR40 YKL151CP36059 337 aa-0.72□□□□□ -2.52
snR40snR40 PHO12P38693 467 aa-0.72□□□□□ -2.52
snR40snR40 YHR218WP38899 603 aa-0.72□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms