RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR38, Length 95 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR38	snR38	CTF8	P38877	133 aa		0.49	□□□□□ -2.33
snR38	snR38	SAH1	P39954	449 aa	Known RBP	0.49	□□□□□ -2.33
snR38	snR38	ATP23	P53722	227 aa		0.49	□□□□□ -2.33
snR38	snR38	SRP1	Q02821	542 aa	Known RBP	0.49	□□□□□ -2.33
snR38	snR38	SRL1	Q08673	210 aa		0.49	□□□□□ -2.33
snR38	snR38	ULA1	Q12059	462 aa		0.49	□□□□□ -2.33
snR38	snR38	YPR089W	O13585	888 aa		0.48	□□□□□ -2.33
snR38	snR38	NOT3	P06102	836 aa	Known RBP	0.48	□□□□□ -2.33
snR38	snR38	SIR3	P06701	978 aa		0.48	□□□□□ -2.33
snR38	snR38	FBP1	P09201	348 aa		0.48	□□□□□ -2.33
snR38	snR38	TUP1	P16649	713 aa		0.48	□□□□□ -2.33
snR38	snR38	MGM1	P32266	881 aa		0.48	□□□□□ -2.33
snR38	snR38	YHR078W	P38799	552 aa		0.48	□□□□□ -2.33
snR38	snR38	YIL108W	P40483	696 aa	Known RBP	0.48	□□□□□ -2.33
snR38	snR38	VHR1	P40522	640 aa		0.48	□□□□□ -2.33
snR38	snR38	GPI13	Q07830	1017 aa		0.48	□□□□□ -2.33
snR38	snR38	MCD1	Q12158	566 aa		0.48	□□□□□ -2.33
snR38	snR38	REV1	P12689	985 aa		0.47	□□□□□ -2.33
snR38	snR38	FUB1	P25659	250 aa		0.47	□□□□□ -2.33
snR38	snR38	RAD27	P26793	382 aa		0.47	□□□□□ -2.33
snR38	snR38	YMC1	P32331	307 aa		0.47	□□□□□ -2.33
snR38	snR38	STE13	P33894	931 aa		0.47	□□□□□ -2.33
snR38	snR38	PMC1	P38929	1173 aa	Predicted RBP	0.47	□□□□□ -2.33
snR38	snR38	CCT3	P39077	534 aa	Known RBP	0.47	□□□□□ -2.33
snR38	snR38	DHH1	P39517	506 aa	Known RBP	0.47	□□□□□ -2.33
snR38	snR38	PIC2	P40035	300 aa		0.47	□□□□□ -2.33
snR38	snR38	SIM1	P40472	476 aa		0.47	□□□□□ -2.33
snR38	snR38	HOS4	P40480	1083 aa		0.47	□□□□□ -2.33
snR38	snR38	AZF1	P41696	914 aa		0.47	□□□□□ -2.33
snR38	snR38	NMD5	P46970	1048 aa		0.47	□□□□□ -2.33
snR38	snR38	SHE10	P53075	577 aa		0.47	□□□□□ -2.33
snR38	snR38	SPC98	P53540	846 aa		0.47	□□□□□ -2.33
snR38	snR38	SFB2	P53953	876 aa		0.47	□□□□□ -2.33
snR38	snR38	TIF35	Q04067	274 aa	Known RBP	0.47	□□□□□ -2.33
snR38	snR38	SSL1	Q04673	461 aa	Predicted RBP	0.47	□□□□□ -2.33
snR38	snR38	HRQ1	Q05549	1077 aa		0.47	□□□□□ -2.33
snR38	snR38	MRL1	Q06815	381 aa		0.47	□□□□□ -2.33
snR38	snR38	MRPL9	P31334	269 aa		0.46	□□□□□ -2.34
snR38	snR38	TYE7	P33122	291 aa	Predicted RBP	0.46	□□□□□ -2.34
snR38	snR38	YKR078W	P36158	585 aa	Known RBP	0.46	□□□□□ -2.34
snR38	snR38	UBS1	P38290	277 aa		0.46	□□□□□ -2.34
snR38	snR38	RRT2	P38332	387 aa		0.46	□□□□□ -2.34
snR38	snR38	PZF1	P39933	429 aa		0.46	□□□□□ -2.34
snR38	snR38	ASI2	P53895	289 aa		0.46	□□□□□ -2.34
snR38	snR38	ADD37	Q03233	198 aa		0.46	□□□□□ -2.34
snR38	snR38	ASM4	Q05166	528 aa		0.46	□□□□□ -2.34
snR38	snR38	CLF1	Q12309	687 aa	Predicted RBP	0.46	□□□□□ -2.34
snR38	snR38	AI5_ALPHA	Q9ZZX1	630 aa		0.46	□□□□□ -2.34
snR38	snR38	SRD1	P09007	221 aa		0.45	□□□□□ -2.34
snR38	snR38	ATO2	P32907	282 aa		0.45	□□□□□ -2.34
snR38	snR38	TIF3	P34167	436 aa	Known RBP	0.45	□□□□□ -2.34
snR38	snR38	YKL151C	P36059	337 aa		0.45	□□□□□ -2.34
snR38	snR38	FLO5	P38894	1075 aa		0.45	□□□□□ -2.34
snR38	snR38	MRPS18	P42847	217 aa		0.45	□□□□□ -2.34
snR38	snR38	DUS1	P53759	423 aa	Known RBP	0.45	□□□□□ -2.34
snR38	snR38	SNA4	Q07549	140 aa		0.45	□□□□□ -2.34
snR38	snR38	NRT1	Q08485	598 aa		0.45	□□□□□ -2.34
snR38	snR38	RSA1	Q08932	381 aa		0.45	□□□□□ -2.34
snR38	snR38	ABF1	P14164	731 aa		0.44	□□□□□ -2.34
snR38	snR38	CDC48	P25694	835 aa	Known RBP	0.44	□□□□□ -2.34
snR38	snR38	PET112	P33893	541 aa		0.44	□□□□□ -2.34
snR38	snR38	FMP46	P36141	133 aa	Known RBP	0.44	□□□□□ -2.34
snR38	snR38	YMR124W	P39523	943 aa	Known RBP	0.44	□□□□□ -2.34
snR38	snR38	OAF1	P39720	1047 aa	Predicted RBP	0.44	□□□□□ -2.34
snR38	snR38	MKT1	P40850	830 aa	Known RBP	0.44	□□□□□ -2.34
snR38	snR38	BAP3	P41815	604 aa		0.44	□□□□□ -2.34
snR38	snR38	GYP7	P48365	746 aa		0.44	□□□□□ -2.34
snR38	snR38	PAN2	P53010	1115 aa	Predicted RBP	0.44	□□□□□ -2.34
snR38	snR38	PRS5	Q12265	496 aa	Known RBP	0.44	□□□□□ -2.34
snR38	snR38	HER1	Q12276	1246 aa		0.44	□□□□□ -2.34
snR38	snR38	YLR415C	O13578	112 aa		0.43	□□□□□ -2.34
snR38	snR38	RFA1	P22336	621 aa	Known RBP	0.43	□□□□□ -2.34
snR38	snR38	SAN1	P22470	610 aa		0.43	□□□□□ -2.34
snR38	snR38	MVD1	P32377	396 aa	Known RBP	0.43	□□□□□ -2.34
snR38	snR38	MRPL4	P36517	319 aa		0.43	□□□□□ -2.34
snR38	snR38	GRS1	P38088	690 aa	Known RBP	0.43	□□□□□ -2.34
snR38	snR38	APD1	P38281	316 aa		0.43	□□□□□ -2.34
snR38	snR38	SFB3	P38810	929 aa		0.43	□□□□□ -2.34
snR38	snR38	MTG2	P38860	518 aa		0.43	□□□□□ -2.34
snR38	snR38	GAD1	Q04792	585 aa		0.43	□□□□□ -2.34
snR38	snR38	TGL5	Q12043	749 aa		0.43	□□□□□ -2.34
snR38	snR38	MDM20	Q12387	796 aa	Known RBP	0.43	□□□□□ -2.34
snR38	snR38	RKM4	Q12504	494 aa		0.43	□□□□□ -2.34
snR38	snR38	HXK1	P04806	485 aa	Known RBP	0.42	□□□□□ -2.34
snR38	snR38	PHO4	P07270	312 aa	Known RBP	0.42	□□□□□ -2.34
snR38	snR38	PRP4	P20053	465 aa	Known RBP	0.42	□□□□□ -2.34
snR38	snR38	YKL107W	P34251	309 aa		0.42	□□□□□ -2.34
snR38	snR38	PHO11	P35842	467 aa		0.42	□□□□□ -2.34
snR38	snR38	YMC2	P38087	329 aa		0.42	□□□□□ -2.34
snR38	snR38	YBR259W	P38338	688 aa		0.42	□□□□□ -2.34
snR38	snR38	PHO12	P38693	467 aa		0.42	□□□□□ -2.34
snR38	snR38	FAA3	P39002	694 aa		0.42	□□□□□ -2.34
snR38	snR38	NPP2	P39997	493 aa		0.42	□□□□□ -2.34
snR38	snR38	IRR1	P40541	1150 aa		0.42	□□□□□ -2.34
snR38	snR38	ROK1	P45818	564 aa	Predicted RBP	0.42	□□□□□ -2.34
snR38	snR38	ASN1	P49089	572 aa	Known RBP	0.42	□□□□□ -2.34
snR38	snR38	FHN1	P53279	174 aa		0.42	□□□□□ -2.34
snR38	snR38	BOP3	P53958	396 aa		0.42	□□□□□ -2.34
snR38	snR38	IDP3	P53982	420 aa	Known RBP	0.42	□□□□□ -2.34
snR38	snR38	YKR011C	Q02209	353 aa		0.42	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms