RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	TDA6	Q06466	467 aa		5.2	□□□□□ -1.58
CMR3	YPR013C	RCL1	Q08096	367 aa	Predicted RBP	5.2	□□□□□ -1.58
CMR3	YPR013C	RSB1	Q08417	382 aa		5.2	□□□□□ -1.58
CMR3	YPR013C	TY1A-NL1	Q12391	440 aa	Known RBP	5.2	□□□□□ -1.58
CMR3	YPR013C	APM4	Q99186	491 aa		5.2	□□□□□ -1.58
CMR3	YPR013C	RPS9A	O13516	197 aa	Known RBP	5.19	□□□□□ -1.58
CMR3	YPR013C	APA1	P16550	321 aa	Known RBP	5.19	□□□□□ -1.58
CMR3	YPR013C	HCA4	P20448	770 aa	Known RBP	5.19	□□□□□ -1.58
CMR3	YPR013C	MPE1	P35728	441 aa	Known RBP	5.19	□□□□□ -1.58
CMR3	YPR013C	OAF3	P36023	863 aa		5.19	□□□□□ -1.58
CMR3	YPR013C	SET5	P38890	526 aa	Known RBP	5.19	□□□□□ -1.58
CMR3	YPR013C	YFL052W	P43551	465 aa		5.19	□□□□□ -1.58
CMR3	YPR013C	TAF1	P46677	1066 aa		5.19	□□□□□ -1.58
CMR3	YPR013C	ENV11	P53246	860 aa		5.19	□□□□□ -1.58
CMR3	YPR013C	VPS30	Q02948	557 aa		5.19	□□□□□ -1.58
CMR3	YPR013C	YML131W	Q03102	365 aa		5.19	□□□□□ -1.58
CMR3	YPR013C	CRR1	Q05790	422 aa		5.19	□□□□□ -1.58
CMR3	YPR013C	RPN7	Q06103	429 aa	Known RBP	5.19	□□□□□ -1.58
CMR3	YPR013C	YPR053C	Q6Q5F3	151 aa		5.19	□□□□□ -1.58
CMR3	YPR013C	NOT3	P06102	836 aa	Known RBP	5.18	□□□□□ -1.58
CMR3	YPR013C	MSS18	P08593	268 aa		5.18	□□□□□ -1.58
CMR3	YPR013C	YCK2	P23292	546 aa	Known RBP	5.18	□□□□□ -1.58
CMR3	YPR013C	GFD2	P25370	566 aa	Known RBP	5.18	□□□□□ -1.58
CMR3	YPR013C	SRO9	P25567	434 aa	Known RBP	5.18	□□□□□ -1.58
CMR3	YPR013C	YHL012W	P38709	493 aa		5.18	□□□□□ -1.58
CMR3	YPR013C	CEP3	P40969	608 aa		5.18	□□□□□ -1.58
CMR3	YPR013C	BFA1	P47113	574 aa		5.18	□□□□□ -1.58
CMR3	YPR013C	RNR4	P49723	345 aa	Known RBP	5.18	□□□□□ -1.58
CMR3	YPR013C	CNM67	P53865	581 aa	Known RBP	5.18	□□□□□ -1.58
CMR3	YPR013C	EAR1	Q03212	550 aa		5.18	□□□□□ -1.58
CMR3	YPR013C	ECM38	Q05902	660 aa	Predicted RBP	5.18	□□□□□ -1.58
CMR3	YPR013C	NBA1	Q08229	501 aa	Known RBP	5.18	□□□□□ -1.58
CMR3	YPR013C	YPL277C	Q08989	487 aa		5.18	□□□□□ -1.58
CMR3	YPR013C	RPS21B	Q3E754	87 aa	Known RBP	5.18	□□□□□ -1.58
CMR3	YPR013C	SEC65	P29478	273 aa		5.17	□□□□□ -1.58
CMR3	YPR013C	NAM7	P30771	971 aa	Known RBP	5.17	□□□□□ -1.58
CMR3	YPR013C	SER1	P33330	395 aa	Known RBP	5.17	□□□□□ -1.58
CMR3	YPR013C	YKR051W	P36142	418 aa		5.17	□□□□□ -1.58
CMR3	YPR013C	MAL31	P38156	614 aa		5.17	□□□□□ -1.58
CMR3	YPR013C	ECM21	P38167	1117 aa	Known RBP	5.17	□□□□□ -1.58
CMR3	YPR013C	YAP1801	P38856	637 aa		5.17	□□□□□ -1.58
CMR3	YPR013C	AIM21	P40563	679 aa		5.17	□□□□□ -1.58
CMR3	YPR013C	QRI7	P43122	407 aa		5.17	□□□□□ -1.58
CMR3	YPR013C	BNA2	P47125	453 aa		5.17	□□□□□ -1.58
CMR3	YPR013C	HFM1	P51979	1187 aa		5.17	□□□□□ -1.58
CMR3	YPR013C	ESF2	P53743	316 aa	Known RBP	5.17	□□□□□ -1.58
CMR3	YPR013C	URN1	Q06525	465 aa	Known RBP	5.17	□□□□□ -1.58
CMR3	YPR013C	SVS1	Q12254	260 aa		5.17	□□□□□ -1.58
CMR3	YPR013C	RRI2	Q12348	645 aa		5.17	□□□□□ -1.58
CMR3	YPR013C	PRC1	P00729	532 aa		5.16	□□□□□ -1.58
CMR3	YPR013C	MDL2	P33311	773 aa		5.16	□□□□□ -1.58
CMR3	YPR013C	IML2	P47031	731 aa		5.16	□□□□□ -1.58
CMR3	YPR013C	HOL1	P53389	586 aa		5.16	□□□□□ -1.58
CMR3	YPR013C	HDA1	P53973	706 aa		5.16	□□□□□ -1.58
CMR3	YPR013C	SDH1	Q00711	640 aa		5.16	□□□□□ -1.58
CMR3	YPR013C	YKR011C	Q02209	353 aa		5.16	□□□□□ -1.58
CMR3	YPR013C	GIR2	Q03768	265 aa	Predicted RBP	5.16	□□□□□ -1.58
CMR3	YPR013C	SAM35	P14693	329 aa		5.15	□□□□□ -1.59
CMR3	YPR013C	SFA1	P32771	386 aa		5.15	□□□□□ -1.59
CMR3	YPR013C	TYE7	P33122	291 aa	Predicted RBP	5.15	□□□□□ -1.59
CMR3	YPR013C	STE13	P33894	931 aa		5.15	□□□□□ -1.59
CMR3	YPR013C	MNN4	P36044	1178 aa		5.15	□□□□□ -1.59
CMR3	YPR013C	YKR018C	P36114	725 aa		5.15	□□□□□ -1.59
CMR3	YPR013C	MCX1	P38323	520 aa	Predicted RBP	5.15	□□□□□ -1.59
CMR3	YPR013C	PUS2	P53167	370 aa		5.15	□□□□□ -1.59
CMR3	YPR013C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
CMR3	YPR013C	RSC58	Q07979	502 aa		5.15	□□□□□ -1.59
CMR3	YPR013C	YOR022C	Q12204	715 aa		5.15	□□□□□ -1.59
CMR3	YPR013C	YOL114C	Q12322	202 aa		5.15	□□□□□ -1.59
CMR3	YPR013C	YVC1	Q12324	675 aa		5.15	□□□□□ -1.59
CMR3	YPR013C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
CMR3	YPR013C	Q0142	Q9ZZW4	58 aa		5.15	□□□□□ -1.59
CMR3	YPR013C	HSC82	P15108	705 aa	Known RBP	5.14	□□□□□ -1.59
CMR3	YPR013C	MSM1	P22438	575 aa		5.14	□□□□□ -1.59
CMR3	YPR013C	MSH1	P25846	959 aa		5.14	□□□□□ -1.59
CMR3	YPR013C	PET309	P32522	965 aa	Predicted RBP	5.14	□□□□□ -1.59
CMR3	YPR013C	FAT1	P38225	669 aa		5.14	□□□□□ -1.59
CMR3	YPR013C	ZIP2	P53061	704 aa		5.14	□□□□□ -1.59
CMR3	YPR013C	RAI1	P53063	387 aa	Known RBP	5.14	□□□□□ -1.59
CMR3	YPR013C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
CMR3	YPR013C	MDM1	Q01846	1127 aa		5.14	□□□□□ -1.59
CMR3	YPR013C	XYL2	Q07993	356 aa		5.14	□□□□□ -1.59
CMR3	YPR013C	SSP2	Q08646	371 aa		5.14	□□□□□ -1.59
CMR3	YPR013C	THI21	Q08975	551 aa		5.14	□□□□□ -1.59
CMR3	YPR013C	DCS2	Q12123	353 aa		5.14	□□□□□ -1.59
CMR3	YPR013C	YLR149C	Q99296	730 aa		5.14	□□□□□ -1.59
CMR3	YPR013C	HOP1	P20050	605 aa		5.13	□□□□□ -1.59
CMR3	YPR013C	RSC6	P25632	483 aa		5.13	□□□□□ -1.59
CMR3	YPR013C	YKR075C	P36155	307 aa		5.13	□□□□□ -1.59
CMR3	YPR013C	FLR1	P38124	548 aa		5.13	□□□□□ -1.59
CMR3	YPR013C	POA1	P38218	177 aa		5.13	□□□□□ -1.59
CMR3	YPR013C	IES1	P43579	692 aa		5.13	□□□□□ -1.59
CMR3	YPR013C	ASK10	P48361	1146 aa		5.13	□□□□□ -1.59
CMR3	YPR013C	UBA2	P52488	636 aa		5.13	□□□□□ -1.59
CMR3	YPR013C	PCL10	P53124	433 aa		5.13	□□□□□ -1.59
CMR3	YPR013C	MDG1	P53885	366 aa		5.13	□□□□□ -1.59
CMR3	YPR013C	CEG1	Q01159	459 aa	Predicted RBP	5.13	□□□□□ -1.59
CMR3	YPR013C	YOR059C	Q08448	450 aa	Known RBP	5.13	□□□□□ -1.59
CMR3	YPR013C	NEW1	Q08972	1196 aa	Known RBP	5.13	□□□□□ -1.59
CMR3	YPR013C	YDR215C	Q12240	137 aa		5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms