RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	DBF2	P22204	572 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	RAD53	P22216	821 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	SPB1	P25582	841 aa	Predicted RBP	4.28	□□□□□ -1.72
HOS3	YPL116W	NIP1	P32497	812 aa	Known RBP	4.28	□□□□□ -1.72
HOS3	YPL116W	DOA4	P32571	926 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	FBP26	P32604	452 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	PTC3	P34221	468 aa	Known RBP	4.28	□□□□□ -1.72
HOS3	YPL116W	KAP104	P38217	918 aa	Known RBP	4.28	□□□□□ -1.72
HOS3	YPL116W	PBY1	P38254	753 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	POP7	P38291	140 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	YHR219W	P38900	624 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	YER186C	P40101	306 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	JEM1	P40358	645 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	SPO22	P40511	975 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	PKP1	P40530	394 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	GCN20	P43535	752 aa	Known RBP	4.28	□□□□□ -1.72
HOS3	YPL116W	IMD4	P50094	524 aa	Known RBP	4.28	□□□□□ -1.72
HOS3	YPL116W	YNR021W	P53723	404 aa	Known RBP	4.28	□□□□□ -1.72
HOS3	YPL116W	GOR1	P53839	350 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	EMI2	Q04409	500 aa	Known RBP	4.28	□□□□□ -1.72
HOS3	YPL116W	ARP10	Q04549	284 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	PHO92	Q06390	306 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	NOP6	Q07623	225 aa	Known RBP	4.28	□□□□□ -1.72
HOS3	YPL116W	ADY3	Q07732	790 aa		4.28	□□□□□ -1.72
HOS3	YPL116W	CTT1	P06115	562 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	HCA4	P20448	770 aa	Known RBP	4.27	□□□□□ -1.73
HOS3	YPL116W	CLB3	P24870	427 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	GFD2	P25370	566 aa	Known RBP	4.27	□□□□□ -1.73
HOS3	YPL116W	SMI1	P32566	505 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	MRP4	P32902	394 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	ATO2	P32907	282 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	SEG2	P34250	1132 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	OCT1	P35999	772 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	UBP11	P36026	717 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	MRPL17	P36528	281 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	ERT1	P38140	529 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	CHK1	P38147	527 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	CCZ1	P38273	704 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	MSG5	P38590	489 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	UTP9	P38882	575 aa	Known RBP	4.27	□□□□□ -1.73
HOS3	YPL116W	PSY2	P40164	858 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	JLP2	P40206	208 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	HUL4	P40985	892 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	PSD2	P53037	1138 aa	Known RBP	4.27	□□□□□ -1.73
HOS3	YPL116W	KXD1	P53158	218 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	PEF1	P53238	335 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	YNL146W	P53906	100 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	EGD1	Q02642	157 aa	Known RBP	4.27	□□□□□ -1.73
HOS3	YPL116W	PML39	Q03760	334 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	SPC24	Q04477	213 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	YLR287C	Q05881	355 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	GMC2	Q06201	188 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	YOR296W	Q08748	1289 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	CDC53	Q12018	815 aa	Known RBP	4.27	□□□□□ -1.73
HOS3	YPL116W	APC11	Q12157	165 aa		4.27	□□□□□ -1.73
HOS3	YPL116W	FUR4	P05316	633 aa	Known RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	MSS116	P15424	664 aa	Known RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	OSM1	P21375	501 aa	Known RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	CLB4	P24871	460 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	MRC1	P25588	1096 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	AFG2	P32794	780 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	AMN1	P38285	549 aa	Predicted RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	COS111	P38308	924 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	BSD2	P38356	321 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	STP2	P38704	541 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	RRM3	P38766	723 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	FCY21	P40039	528 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	VPS53	P47061	822 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	MDE1	P47095	244 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	RSM7	P47150	247 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	SHE9	Q04172	456 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	YCS4	Q06156	1176 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	SEC10	Q06245	871 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	AHC1	Q12433	566 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	MST1	P07236	462 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	FBP1	P09201	348 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	KRS1	P15180	591 aa	Known RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	LCB1	P25045	558 aa	Known RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	OXP1	P28273	1286 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	GUT1	P32190	709 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	SSH4	P32343	579 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	MGM101	P32787	269 aa	Known RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	TYS1	P36421	394 aa	Known RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	APM3	P38153	483 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	KEL1	P38853	1164 aa	Known RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	RPN10	P38886	268 aa	Known RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	VAC8	P39968	578 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	BIM1	P40013	344 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	YTA12	P40341	825 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	MVP1	P40959	511 aa	Known RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	BRE2	P43132	505 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	DSE4	P53753	1117 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	RSC4	Q02206	625 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	ATG13	Q06628	738 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	DSE3	Q08729	430 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	MSC6	Q08818	692 aa	Known RBP	4.26	□□□□□ -1.73
HOS3	YPL116W	AIM7	Q12156	149 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	YBL113C	Q7M4S9	792 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	SRN2	Q99176	213 aa		4.26	□□□□□ -1.73
HOS3	YPL116W	CET1	O13297	549 aa	Predicted RBP	4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms