RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	SUV3	P32580	737 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	TFC4	P33339	1025 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	SQT1	P35184	431 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	TIF5	P38431	405 aa	Known RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	MSG5	P38590	489 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	TIF4631	P39935	952 aa	Known RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	PSY2	P40164	858 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	ASG1	P40467	964 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	ILM1	P47155	203 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	MDR1	P53258	950 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	PRP3	Q03338	469 aa	Predicted RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	TUB2	P02557	457 aa	Known RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	YML002W	P0CF17	737 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	PHO8	P11491	566 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	AFG2	P32794	780 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	PGM1	P33401	570 aa	Known RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	YBL028C	P38202	106 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	NCL1	P38205	684 aa	Known RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	AXL1	P40851	1208 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	JJJ1	P53863	590 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	TIM8	P57744	87 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	GTR1	Q00582	310 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	CUS1	Q02554	436 aa	Predicted RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	RKM4	Q12504	494 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	JIP3	O13555	125 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	CHS2	P14180	963 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	SFL1	P20134	766 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	VAN1	P23642	535 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	REV7	P38927	245 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	VPS4	P52917	437 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	SHR3	Q02774	210 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	YDR222W	Q04925	415 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	ALR1	Q08269	859 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	SLX4	Q12098	748 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	SEC14	P24280	304 aa	Known RBP	4.19	□□□□□ -1.74
NCR1	YPL006W	VHC1	P38329	1120 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	MDJ2	P42834	146 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	KIN4	Q01919	800 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	ATG16	Q03818	150 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	DON1	Q05610	365 aa		4.19	□□□□□ -1.74
NCR1	YPL006W	GCR1	P07261	785 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	SWI6	P09959	803 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	ICL1	P28240	557 aa	Predicted RBP	4.18	□□□□□ -1.74
NCR1	YPL006W	OXP1	P28273	1286 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	MLS1	P30952	554 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	YSC83	P32792	385 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	YBL055C	P34220	418 aa	Predicted RBP	4.18	□□□□□ -1.74
NCR1	YPL006W	UBP13	P38187	747 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	SPC72	P39723	622 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	SNU71	P53207	620 aa	Known RBP	4.18	□□□□□ -1.74
NCR1	YPL006W	SHE9	Q04172	456 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	LCB5	Q06147	687 aa	Known RBP	4.18	□□□□□ -1.74
NCR1	YPL006W	GNT1	Q12096	491 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	DIP2	Q12220	943 aa	Predicted RBP	4.18	□□□□□ -1.74
NCR1	YPL006W	CDC33	P07260	213 aa	Known RBP	4.18	□□□□□ -1.74
NCR1	YPL006W	TRM2	P33753	639 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	SET3	P36124	751 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	KEL1	P38853	1164 aa	Known RBP	4.18	□□□□□ -1.74
NCR1	YPL006W	FIS1	P40515	155 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	VPS53	P47061	822 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	CLA4	P48562	842 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	CTR1	P49573	406 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	CDC53	Q12018	815 aa	Known RBP	4.18	□□□□□ -1.74
NCR1	YPL006W	RAD3	P06839	778 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	SCJ1	P25303	377 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	GLN1	P32288	370 aa	Known RBP	4.18	□□□□□ -1.74
NCR1	YPL006W	YKL222C	P35995	705 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	ERC1	P38767	581 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	GTT3	P39996	337 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	YTA12	P40341	825 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	ZIP2	P53061	704 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	YGR111W	P53265	400 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	PHM6	Q05637	104 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	DUS4	Q06063	367 aa		4.18	□□□□□ -1.74
NCR1	YPL006W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
NCR1	YPL006W	PMA1	P05030	918 aa	Known RBP	4.17	□□□□□ -1.74
NCR1	YPL006W	RAD10	P06838	210 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	YMR085W	P0CF18	432 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	TPS2	P31688	896 aa	Known RBP	4.17	□□□□□ -1.74
NCR1	YPL006W	DBF4	P32325	704 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	RRN6	P32786	894 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	STE13	P33894	931 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	PHO88	P38264	188 aa	Predicted RBP	4.17	□□□□□ -1.74
NCR1	YPL006W	SSP1	P38871	571 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	RPN3	P40016	523 aa	Known RBP	4.17	□□□□□ -1.74
NCR1	YPL006W	EMW1	P42842	904 aa	Known RBP	4.17	□□□□□ -1.74
NCR1	YPL006W	PHO86	P46956	311 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	DAS1	P47005	663 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	TAM41	P53230	385 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	SOL4	P53315	255 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	THS1	P04801	734 aa	Known RBP	4.17	□□□□□ -1.74
NCR1	YPL006W	ADE3	P07245	946 aa	Known RBP	4.17	□□□□□ -1.74
NCR1	YPL006W	HSM3	P38348	480 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	PCL10	P53124	433 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	LIF1	P53150	421 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	CNM67	P53865	581 aa	Known RBP	4.17	□□□□□ -1.74
NCR1	YPL006W	PPM1	Q04081	328 aa		4.17	□□□□□ -1.74
NCR1	YPL006W	GPN2	Q08726	347 aa	Predicted RBP	4.17	□□□□□ -1.74
NCR1	YPL006W	PGK1	P00560	416 aa	Known RBP	4.17	□□□□□ -1.74
NCR1	YPL006W	TCP1	P12612	559 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 91 ms