RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C SEC26P41810 973 aaKnown RBP7.89□□□□□ -1.15
RUP1YOR138C FIG4P42837 879 aa7.89□□□□□ -1.15
RUP1YOR138C SNU71P53207 620 aaKnown RBP7.89□□□□□ -1.15
RUP1YOR138C ARK1P53974 638 aa7.89□□□□□ -1.15
RUP1YOR138C MTG1Q03151 367 aaPredicted RBP7.89□□□□□ -1.15
RUP1YOR138C VPS16Q03308 798 aa7.89□□□□□ -1.15
RUP1YOR138C TUB2P02557 457 aaKnown RBP7.88□□□□□ -1.15
RUP1YOR138C ESS1P22696 170 aa7.88□□□□□ -1.15
RUP1YOR138C SSE1P32589 693 aaKnown RBP7.88□□□□□ -1.15
RUP1YOR138C VPS72Q03388 795 aa7.88□□□□□ -1.15
RUP1YOR138C DPL1Q05567 589 aa7.88□□□□□ -1.15
RUP1YOR138C FKS1P38631 1876 aaKnown RBP7.88□□□□□ -1.15
RUP1YOR138C SEC14P24280 304 aaKnown RBP7.88□□□□□ -1.15
RUP1YOR138C PUF4P25339 888 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
RUP1YOR138C KIP1P28742 1111 aa7.88□□□□□ -1.15
RUP1YOR138C SEC21P32074 935 aaKnown RBP7.88□□□□□ -1.15
RUP1YOR138C MVD1P32377 396 aaKnown RBP7.88□□□□□ -1.15
RUP1YOR138C SWI3P32591 825 aa7.88□□□□□ -1.15
RUP1YOR138C STE13P33894 931 aa7.88□□□□□ -1.15
RUP1YOR138C PTC3P34221 468 aaKnown RBP7.88□□□□□ -1.15
RUP1YOR138C CCL1P37366 393 aa7.88□□□□□ -1.15
RUP1YOR138C YBP1P38315 674 aa7.88□□□□□ -1.15
RUP1YOR138C TPS3P38426 1054 aaKnown RBP7.88□□□□□ -1.15
RUP1YOR138C CLA4P48562 842 aa7.88□□□□□ -1.15
RUP1YOR138C YNL144CP53907 740 aa7.88□□□□□ -1.15
RUP1YOR138C YML119WQ03208 357 aa7.88□□□□□ -1.15
RUP1YOR138C MAG2Q06436 670 aaKnown RBP7.88□□□□□ -1.15
RUP1YOR138C RLP24Q07915 199 aaKnown RBP7.88□□□□□ -1.15
RUP1YOR138C DBP5P20449 482 aaKnown RBP7.87□□□□□ -1.15
RUP1YOR138C CDC11P32458 415 aa7.87□□□□□ -1.15
RUP1YOR138C YBL055CP34220 418 aaPredicted RBP7.87□□□□□ -1.15
RUP1YOR138C ERC1P38767 581 aa7.87□□□□□ -1.15
RUP1YOR138C CNM67P53865 581 aaKnown RBP7.87□□□□□ -1.15
RUP1YOR138C SHR3Q02774 210 aa7.87□□□□□ -1.15
RUP1YOR138C CBF1P17106 351 aa7.86□□□□□ -1.15
RUP1YOR138C PRP22P24384 1145 aaKnown RBP7.86□□□□□ -1.15
RUP1YOR138C EUG1P32474 517 aa7.86□□□□□ -1.15
RUP1YOR138C SUV3P32580 737 aa7.86□□□□□ -1.15
RUP1YOR138C FZO1P38297 855 aa7.86□□□□□ -1.15
RUP1YOR138C MMS21P38632 267 aa7.86□□□□□ -1.15
RUP1YOR138C GPD2P41911 440 aaKnown RBP7.86□□□□□ -1.15
RUP1YOR138C UBP6P43593 499 aaKnown RBP7.86□□□□□ -1.15
RUP1YOR138C NNF2P53253 936 aa7.86□□□□□ -1.15
RUP1YOR138C YGR111WP53265 400 aa7.86□□□□□ -1.15
RUP1YOR138C UBX4P54730 416 aa7.86□□□□□ -1.15
RUP1YOR138C SHE9Q04172 456 aa7.86□□□□□ -1.15
RUP1YOR138C SVF1Q05515 481 aa7.86□□□□□ -1.15
RUP1YOR138C GNT1Q12096 491 aa7.86□□□□□ -1.15
RUP1YOR138C YDL206WQ12424 762 aa7.86□□□□□ -1.15
RUP1YOR138C CMD1P06787 147 aaKnown RBP7.86□□□□□ -1.15
RUP1YOR138C PEP5P12868 1029 aa7.86□□□□□ -1.15
RUP1YOR138C VMA4P22203 233 aaKnown RBP7.86□□□□□ -1.15
RUP1YOR138C CAP1P28495 268 aaKnown RBP7.86□□□□□ -1.15
RUP1YOR138C NIP1P32497 812 aaKnown RBP7.86□□□□□ -1.15
RUP1YOR138C YBL086CP38177 466 aa7.86□□□□□ -1.15
RUP1YOR138C YJL171CP46992 396 aa7.86□□□□□ -1.15
RUP1YOR138C MDR1P53258 950 aa7.86□□□□□ -1.15
RUP1YOR138C OSW1Q08692 278 aa7.86□□□□□ -1.15
RUP1YOR138C PHR1P05066 565 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
RUP1YOR138C PWP1P21304 576 aaKnown RBP7.85□□□□□ -1.15
RUP1YOR138C BUD14P27637 709 aa7.85□□□□□ -1.15
RUP1YOR138C SPT5P27692 1063 aaKnown RBP7.85□□□□□ -1.15
RUP1YOR138C EFB1P32471 206 aaKnown RBP7.85□□□□□ -1.15
RUP1YOR138C MUD1P32605 298 aaKnown RBP7.85□□□□□ -1.15
RUP1YOR138C UGA4P32837 571 aa7.85□□□□□ -1.15
RUP1YOR138C YME2P32843 850 aa7.85□□□□□ -1.15
RUP1YOR138C YKL222CP35995 705 aa7.85□□□□□ -1.15
RUP1YOR138C UBP11P36026 717 aa7.85□□□□□ -1.15
RUP1YOR138C YMR134WP40207 237 aa7.85□□□□□ -1.15
RUP1YOR138C YTA12P40341 825 aa7.85□□□□□ -1.15
RUP1YOR138C EMW1P42842 904 aaKnown RBP7.85□□□□□ -1.15
RUP1YOR138C MTC3P53077 123 aa7.85□□□□□ -1.15
RUP1YOR138C ERP6P53198 216 aa7.85□□□□□ -1.15
RUP1YOR138C ATG16Q03818 150 aa7.85□□□□□ -1.15
RUP1YOR138C WHI4Q07655 649 aaKnown RBP7.85□□□□□ -1.15
RUP1YOR138C THS1P04801 734 aaKnown RBP7.85□□□□□ -1.15
RUP1YOR138C SSD1P24276 1250 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
RUP1YOR138C DAL2P25335 343 aa7.85□□□□□ -1.15
RUP1YOR138C YSC83P32792 385 aa7.85□□□□□ -1.15
RUP1YOR138C PEX2P32800 271 aa7.85□□□□□ -1.15
RUP1YOR138C ERT1P38140 529 aa7.85□□□□□ -1.15
RUP1YOR138C VHR2P40041 505 aa7.85□□□□□ -1.15
RUP1YOR138C DAS1P47005 663 aa7.85□□□□□ -1.15
RUP1YOR138C YGL039WP53183 348 aaKnown RBP7.85□□□□□ -1.15
RUP1YOR138C SPO19Q03029 223 aa7.85□□□□□ -1.15
RUP1YOR138C TMA64Q04600 565 aaKnown RBP7.85□□□□□ -1.15
RUP1YOR138C CRD1Q07560 283 aa7.85□□□□□ -1.15
RUP1YOR138C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
RUP1YOR138C NCR1Q12200 1170 aa7.85□□□□□ -1.15
RUP1YOR138C PGK1P00560 416 aaKnown RBP7.84□□□□□ -1.15
RUP1YOR138C RAD3P06839 778 aa7.84□□□□□ -1.15
RUP1YOR138C GCR1P07261 785 aa7.84□□□□□ -1.15
RUP1YOR138C ILV2P07342 687 aaKnown RBP7.84□□□□□ -1.15
RUP1YOR138C YMR085WP0CF18 432 aa7.84□□□□□ -1.15
RUP1YOR138C GCD2P12754 651 aaPredicted RBP7.84□□□□□ -1.15
RUP1YOR138C MRPL25P23369 157 aa7.84□□□□□ -1.15
RUP1YOR138C CDC48P25694 835 aaKnown RBP7.84□□□□□ -1.15
RUP1YOR138C ATG19P35193 415 aa7.84□□□□□ -1.15
RUP1YOR138C MRX3P38172 270 aa7.84□□□□□ -1.15
RUP1YOR138C ERP5P38819 212 aa7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms