RNA–Protein interactions for RNA: YOL143C

RIB4, Transcript of Lumazine synthase (DMRL synthase), yeast

Gene RIB4, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIB4	YOL143C	ENT1	Q12518	454 aa		4.92	□□□□□ -1.62
RIB4	YOL143C	CAN1	P04817	590 aa		4.91	□□□□□ -1.62
RIB4	YOL143C	CDC48	P25694	835 aa	Known RBP	4.91	□□□□□ -1.62
RIB4	YOL143C	CDC20	P26309	610 aa		4.91	□□□□□ -1.62
RIB4	YOL143C	YKL091C	P33324	310 aa	Known RBP	4.91	□□□□□ -1.62
RIB4	YOL143C	PET10	P36139	283 aa		4.91	□□□□□ -1.62
RIB4	YOL143C	YKR078W	P36158	585 aa	Known RBP	4.91	□□□□□ -1.62
RIB4	YOL143C	ORC1	P54784	914 aa	Predicted RBP	4.91	□□□□□ -1.62
RIB4	YOL143C	LCD1	Q04377	747 aa		4.91	□□□□□ -1.62
RIB4	YOL143C	HMI1	Q12039	706 aa		4.91	□□□□□ -1.62
RIB4	YOL143C	CDC11	P32458	415 aa		4.9	□□□□□ -1.63
RIB4	YOL143C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RIB4	YOL143C	YBR238C	P38330	731 aa	Known RBP	4.9	□□□□□ -1.63
RIB4	YOL143C	CHZ1	P40019	153 aa	Predicted RBP	4.9	□□□□□ -1.63
RIB4	YOL143C	VPS62	P53285	467 aa		4.9	□□□□□ -1.63
RIB4	YOL143C	YAP6	Q03935	383 aa		4.9	□□□□□ -1.63
RIB4	YOL143C	RXT3	Q07458	294 aa		4.9	□□□□□ -1.63
RIB4	YOL143C	ACK1	Q07622	623 aa	Predicted RBP	4.9	□□□□□ -1.63
RIB4	YOL143C	WHI4	Q07655	649 aa	Known RBP	4.9	□□□□□ -1.63
RIB4	YOL143C	ADY3	Q07732	790 aa		4.9	□□□□□ -1.63
RIB4	YOL143C	ERR1	P0CX10	437 aa		4.89	□□□□□ -1.63
RIB4	YOL143C	ERR2	P0CX11	437 aa		4.89	□□□□□ -1.63
RIB4	YOL143C	PRP45	P28004	379 aa	Predicted RBP	4.89	□□□□□ -1.63
RIB4	YOL143C	FLR1	P38124	548 aa		4.89	□□□□□ -1.63
RIB4	YOL143C	POA1	P38218	177 aa		4.89	□□□□□ -1.63
RIB4	YOL143C	HUL4	P40985	892 aa		4.89	□□□□□ -1.63
RIB4	YOL143C	TAF1	P46677	1066 aa		4.89	□□□□□ -1.63
RIB4	YOL143C	PBP1	P53297	722 aa	Known RBP	4.89	□□□□□ -1.63
RIB4	YOL143C	YDL124W	Q07551	312 aa	Known RBP	4.89	□□□□□ -1.63
RIB4	YOL143C	NOT3	P06102	836 aa	Known RBP	4.88	□□□□□ -1.63
RIB4	YOL143C	SPE1	P08432	466 aa		4.88	□□□□□ -1.63
RIB4	YOL143C	HSF1	P10961	833 aa		4.88	□□□□□ -1.63
RIB4	YOL143C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RIB4	YOL143C	REC104	P33323	182 aa		4.88	□□□□□ -1.63
RIB4	YOL143C	BUD6	P41697	788 aa		4.88	□□□□□ -1.63
RIB4	YOL143C	UBP6	P43593	499 aa	Known RBP	4.88	□□□□□ -1.63
RIB4	YOL143C	MET12	P46151	657 aa		4.88	□□□□□ -1.63
RIB4	YOL143C	CCM1	P48237	864 aa	Predicted RBP	4.88	□□□□□ -1.63
RIB4	YOL143C	RPN4	Q03465	531 aa		4.88	□□□□□ -1.63
RIB4	YOL143C	PSK1	P31374	1356 aa		4.88	□□□□□ -1.63
RIB4	YOL143C	LEU2	P04173	364 aa	Predicted RBP	4.87	□□□□□ -1.63
RIB4	YOL143C	TOM70	P07213	617 aa	Known RBP	4.87	□□□□□ -1.63
RIB4	YOL143C	GAL11	P19659	1081 aa		4.87	□□□□□ -1.63
RIB4	YOL143C	RAI1	P53063	387 aa	Known RBP	4.87	□□□□□ -1.63
RIB4	YOL143C	SSL1	Q04673	461 aa	Predicted RBP	4.87	□□□□□ -1.63
RIB4	YOL143C	ENV7	Q12003	364 aa		4.87	□□□□□ -1.63
RIB4	YOL143C	YOR131C	Q12486	218 aa		4.87	□□□□□ -1.63
RIB4	YOL143C	ADE6	P38972	1358 aa	Known RBP	4.87	□□□□□ -1.63
RIB4	YOL143C	RPC82	P32349	654 aa		4.86	□□□□□ -1.63
RIB4	YOL143C	RPD3	P32561	433 aa		4.86	□□□□□ -1.63
RIB4	YOL143C	TIM23	P32897	222 aa		4.86	□□□□□ -1.63
RIB4	YOL143C	DOM34	P33309	386 aa		4.86	□□□□□ -1.63
RIB4	YOL143C	LST4	P34239	828 aa		4.86	□□□□□ -1.63
RIB4	YOL143C	YLR224W	Q05947	369 aa		4.86	□□□□□ -1.63
RIB4	YOL143C	TMA10	Q06177	86 aa		4.86	□□□□□ -1.63
RIB4	YOL143C	ESC8	Q08119	714 aa		4.86	□□□□□ -1.63
RIB4	YOL143C	YLR419W	Q06698	1435 aa	Known RBP	4.86	□□□□□ -1.63
RIB4	YOL143C	HIS5	P07172	385 aa		4.85	□□□□□ -1.63
RIB4	YOL143C	CIT2	P08679	460 aa		4.85	□□□□□ -1.63
RIB4	YOL143C	SCT1	P32784	759 aa		4.85	□□□□□ -1.63
RIB4	YOL143C	STE13	P33894	931 aa		4.85	□□□□□ -1.63
RIB4	YOL143C	GGA2	P38817	585 aa	Known RBP	4.85	□□□□□ -1.63
RIB4	YOL143C	GYP8	P43570	497 aa		4.85	□□□□□ -1.63
RIB4	YOL143C	IMH1	Q06704	911 aa	Known RBP	4.85	□□□□□ -1.63
RIB4	YOL143C	YLR358C	O13565	187 aa		4.84	□□□□□ -1.63
RIB4	YOL143C	RPS24A	P0CX31	135 aa	Known RBP	4.84	□□□□□ -1.63
RIB4	YOL143C	RPS24B	P0CX32	135 aa	Known RBP	4.84	□□□□□ -1.63
RIB4	YOL143C	PLB1	P39105	664 aa		4.84	□□□□□ -1.63
RIB4	YOL143C	CHA4	P43634	648 aa		4.84	□□□□□ -1.63
RIB4	YOL143C	HDA1	P53973	706 aa		4.84	□□□□□ -1.63
RIB4	YOL143C	CLU1	Q03690	1277 aa	Known RBP	4.84	□□□□□ -1.63
RIB4	YOL143C	RFA1	P22336	621 aa	Known RBP	4.83	□□□□□ -1.64
RIB4	YOL143C	NUP82	P40368	713 aa		4.83	□□□□□ -1.64
RIB4	YOL143C	CEP3	P40969	608 aa		4.83	□□□□□ -1.64
RIB4	YOL143C	PSP2	P50109	593 aa	Known RBP	4.83	□□□□□ -1.64
RIB4	YOL143C	NOP12	Q08208	459 aa	Known RBP	4.83	□□□□□ -1.64
RIB4	YOL143C	SLM3	Q12093	417 aa		4.83	□□□□□ -1.64
RIB4	YOL143C	YML133C	Q03099	1374 aa		4.82	□□□□□ -1.64
RIB4	YOL143C	YLL067C	Q07888	1374 aa		4.82	□□□□□ -1.64
RIB4	YOL143C	YLL066C	Q99208	1374 aa		4.82	□□□□□ -1.64
RIB4	YOL143C	URM1	P40554	99 aa	Predicted RBP	4.82	□□□□□ -1.64
RIB4	YOL143C	MAL11	P53048	616 aa		4.82	□□□□□ -1.64
RIB4	YOL143C	YGR283C	P53336	341 aa	Predicted RBP	4.82	□□□□□ -1.64
RIB4	YOL143C	UPC2	Q12151	913 aa		4.82	□□□□□ -1.64
RIB4	YOL143C	KCS1	Q12494	1050 aa		4.82	□□□□□ -1.64
RIB4	YOL143C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
RIB4	YOL143C	MPH2	P0CD99	609 aa		4.81	□□□□□ -1.64
RIB4	YOL143C	URA1	P28272	314 aa	Predicted RBP	4.81	□□□□□ -1.64
RIB4	YOL143C	CTS1	P29029	562 aa		4.81	□□□□□ -1.64
RIB4	YOL143C	GDH3	P39708	457 aa		4.81	□□□□□ -1.64
RIB4	YOL143C	GIP4	P39732	760 aa		4.81	□□□□□ -1.64
RIB4	YOL143C	YIL108W	P40483	696 aa	Known RBP	4.81	□□□□□ -1.64
RIB4	YOL143C	ALG2	P43636	503 aa		4.81	□□□□□ -1.64
RIB4	YOL143C	TY4A-J	P47023	414 aa		4.81	□□□□□ -1.64
RIB4	YOL143C	NCS6	P53088	359 aa		4.81	□□□□□ -1.64
RIB4	YOL143C	YKR011C	Q02209	353 aa		4.81	□□□□□ -1.64
RIB4	YOL143C	FBP1	P09201	348 aa		4.8	□□□□□ -1.64
RIB4	YOL143C	YCL002C	P25565	263 aa		4.8	□□□□□ -1.64
RIB4	YOL143C	YCR015C	P25616	317 aa		4.8	□□□□□ -1.64
RIB4	YOL143C	STE14	P32584	239 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms