RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	MRPL10	P36520	322 aa		10.32	□□□□□ -0.76
MSB4	YOL112W	MIP6	P38760	659 aa	Known RBP	10.32	□□□□□ -0.76
MSB4	YOL112W	FMP10	P40098	244 aa		10.32	□□□□□ -0.76
MSB4	YOL112W	TBF1	Q02457	562 aa		10.32	□□□□□ -0.76
MSB4	YOL112W	CDD1	Q06549	142 aa		10.32	□□□□□ -0.76
MSB4	YOL112W	DNL4	Q08387	944 aa	Predicted RBP	10.32	□□□□□ -0.76
MSB4	YOL112W	CWC2	Q12046	339 aa	Predicted RBP	10.32	□□□□□ -0.76
MSB4	YOL112W	APN2	P38207	520 aa		10.31	□□□□□ -0.76
MSB4	YOL112W	SPT8	P38915	602 aa		10.31	□□□□□ -0.76
MSB4	YOL112W	XDJ1	P39102	459 aa		10.31	□□□□□ -0.76
MSB4	YOL112W	BUD16	P39988	312 aa		10.31	□□□□□ -0.76
MSB4	YOL112W	MET13	P53128	600 aa		10.31	□□□□□ -0.76
MSB4	YOL112W	CEF1	Q03654	590 aa	Predicted RBP	10.31	□□□□□ -0.76
MSB4	YOL112W	PKH2	Q12236	1081 aa	Known RBP	10.31	□□□□□ -0.76
MSB4	YOL112W	YDR034W-B	Q6Q5X2	51 aa		10.31	□□□□□ -0.76
MSB4	YOL112W	CIT2	P08679	460 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	SSB1	P11484	613 aa	Known RBP	10.3	□□□□□ -0.76
MSB4	YOL112W	APL1	P27351	700 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	CDC11	P32458	415 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	SWI3	P32591	825 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	RFS1	P38234	210 aa	Known RBP	10.3	□□□□□ -0.76
MSB4	YOL112W	CTM1	P38818	585 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	FTR1	P40088	404 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	SSB2	P40150	613 aa	Known RBP	10.3	□□□□□ -0.76
MSB4	YOL112W	MGA2	P40578	1113 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	DAS1	P47005	663 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	INP52	P50942	1183 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	RCR2	Q03446	210 aa	Known RBP	10.3	□□□□□ -0.76
MSB4	YOL112W	RGA2	Q06407	1009 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	YDL206W	Q12424	762 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	CTF3	Q12748	733 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	NAT1	P12945	854 aa	Known RBP	10.3	□□□□□ -0.76
MSB4	YOL112W	SEC65	P29478	273 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	MRPL7	P36519	292 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	CCL1	P37366	393 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	EFM2	P38347	419 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	KIC1	P38692	1080 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	YHR054C	P38780	354 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	YHR202W	P38887	602 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	YFL052W	P43551	465 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	YGR130C	P53278	816 aa		10.3	□□□□□ -0.76
MSB4	YOL112W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	10.3	□□□□□ -0.76	RIP-Chip
MSB4	YOL112W	IWR1	Q07532	353 aa	Predicted RBP	10.3	□□□□□ -0.76
MSB4	YOL112W	SGT2	Q12118	346 aa	Known RBP	10.3	□□□□□ -0.76
MSB4	YOL112W	CDC42	P19073	191 aa		10.29	□□□□□ -0.76
MSB4	YOL112W	MSH3	P25336	1018 aa		10.29	□□□□□ -0.76
MSB4	YOL112W	URK1	P27515	501 aa		10.29	□□□□□ -0.76
MSB4	YOL112W	CYS3	P31373	394 aa	Known RBP	10.29	□□□□□ -0.76
MSB4	YOL112W	BIO2	P32451	375 aa		10.29	□□□□□ -0.76
MSB4	YOL112W	CBF2	P32504	956 aa		10.29	□□□□□ -0.76
MSB4	YOL112W	GCS1	P35197	352 aa		10.29	□□□□□ -0.76
MSB4	YOL112W	FAF1	P40546	346 aa	Predicted RBP	10.29	□□□□□ -0.76
MSB4	YOL112W	HFM1	P51979	1187 aa		10.29	□□□□□ -0.76
MSB4	YOL112W	LCD1	Q04377	747 aa		10.29	□□□□□ -0.76
MSB4	YOL112W	YLR297W	Q05899	129 aa		10.29	□□□□□ -0.76
MSB4	YOL112W	CSR1	Q06705	408 aa	Known RBP	10.29	□□□□□ -0.76
MSB4	YOL112W	ESC8	Q08119	714 aa		10.29	□□□□□ -0.76
MSB4	YOL112W	SPT2	P06843	333 aa	Predicted RBP	10.28	□□□□□ -0.76
MSB4	YOL112W	RAD54	P32863	898 aa		10.28	□□□□□ -0.76
MSB4	YOL112W	YKR023W	P36119	530 aa	Known RBP	10.28	□□□□□ -0.76
MSB4	YOL112W	CPR7	P47103	393 aa		10.28	□□□□□ -0.76
MSB4	YOL112W	COS5	P47187	383 aa		10.28	□□□□□ -0.76
MSB4	YOL112W	GIS3	Q12418	502 aa		10.28	□□□□□ -0.76
MSB4	YOL112W	SPO11	P23179	398 aa		10.27	□□□□□ -0.77
MSB4	YOL112W	RRT12	P25381	491 aa		10.27	□□□□□ -0.77
MSB4	YOL112W	PEX2	P32800	271 aa		10.27	□□□□□ -0.77
MSB4	YOL112W	SAP190	P36123	1033 aa		10.27	□□□□□ -0.77
MSB4	YOL112W	RPA49	Q01080	415 aa	Predicted RBP	10.27	□□□□□ -0.77
MSB4	YOL112W	HEH2	Q03281	663 aa		10.27	□□□□□ -0.77
MSB4	YOL112W	ABP140	Q08641	628 aa	Known RBP	10.27	□□□□□ -0.77
MSB4	YOL112W	REC8	Q12188	680 aa		10.27	□□□□□ -0.77
MSB4	YOL112W	SEC21	P32074	935 aa	Known RBP	10.26	□□□□□ -0.77
MSB4	YOL112W	XRS2	P33301	854 aa		10.26	□□□□□ -0.77
MSB4	YOL112W	MNR2	P35724	969 aa		10.26	□□□□□ -0.77
MSB4	YOL112W	AGP2	P38090	596 aa		10.26	□□□□□ -0.77
MSB4	YOL112W	RTT107	P38850	1070 aa		10.26	□□□□□ -0.77
MSB4	YOL112W	TFG2	P41896	400 aa	Predicted RBP	10.26	□□□□□ -0.77
MSB4	YOL112W	ZAP1	P47043	880 aa		10.26	□□□□□ -0.77
MSB4	YOL112W	SPC98	P53540	846 aa		10.26	□□□□□ -0.77
MSB4	YOL112W	STP1	Q00947	519 aa		10.26	□□□□□ -0.77
MSB4	YOL112W	PPM1	Q04081	328 aa		10.26	□□□□□ -0.77
MSB4	YOL112W	SCJ1	P25303	377 aa		10.25	□□□□□ -0.77
MSB4	YOL112W	YEL023C	P39992	682 aa		10.25	□□□□□ -0.77
MSB4	YOL112W	YNL034W	P53963	612 aa		10.25	□□□□□ -0.77
MSB4	YOL112W	YNL018C	P53976	612 aa		10.25	□□□□□ -0.77
MSB4	YOL112W	HAP2	P06774	265 aa		10.24	□□□□□ -0.77
MSB4	YOL112W	IDI1	P15496	288 aa		10.24	□□□□□ -0.77
MSB4	YOL112W	TUP1	P16649	713 aa		10.24	□□□□□ -0.77
MSB4	YOL112W	KIP1	P28742	1111 aa		10.24	□□□□□ -0.77
MSB4	YOL112W	PXL1	P36166	706 aa		10.24	□□□□□ -0.77
MSB4	YOL112W	TBS1	P38114	1094 aa		10.24	□□□□□ -0.77
MSB4	YOL112W	STB5	P38699	743 aa		10.24	□□□□□ -0.77
MSB4	YOL112W	FYV8	P46949	817 aa	Known RBP	10.24	□□□□□ -0.77
MSB4	YOL112W	SMC3	P47037	1230 aa		10.24	□□□□□ -0.77
MSB4	YOL112W	ALT1	P52893	592 aa		10.24	□□□□□ -0.77
MSB4	YOL112W	TAD1	P53065	400 aa		10.24	□□□□□ -0.77
MSB4	YOL112W	YPR027C	Q12079	277 aa		10.24	□□□□□ -0.77
MSB4	YOL112W	GAL80	P04387	435 aa		10.23	□□□□□ -0.77
MSB4	YOL112W	CHS1	P08004	1131 aa		10.23	□□□□□ -0.77
MSB4	YOL112W	PHO13	P19881	312 aa		10.23	□□□□□ -0.77

Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms