RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W EAF1Q06337 982 aa2.39□□□□□ -2.03
HSH155YMR288W YPR196WQ06595 470 aa2.39□□□□□ -2.03
HSH155YMR288W DIB1Q06819 143 aaPredicted RBP2.39□□□□□ -2.03
HSH155YMR288W GLT1Q12680 2145 aaKnown RBP2.39□□□□□ -2.03
HSH155YMR288W RPL11BQ3E757 174 aaPredicted RBP2.39□□□□□ -2.03
HSH155YMR288W STI1P15705 589 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
HSH155YMR288W HSP60P19882 572 aaKnown RBP2.39□□□□□ -2.03
HSH155YMR288W MBP1P39678 833 aa2.39□□□□□ -2.03
HSH155YMR288W MXR1P40029 184 aa2.39□□□□□ -2.03
HSH155YMR288W PSF2P40359 213 aa2.39□□□□□ -2.03
HSH155YMR288W ALR2P43553 858 aa2.39□□□□□ -2.03
HSH155YMR288W YFR016CP43597 1233 aaKnown RBP2.39□□□□□ -2.03
HSH155YMR288W YGR125WP53273 1036 aa2.39□□□□□ -2.03
HSH155YMR288W CTF4Q01454 927 aa2.39□□□□□ -2.03
HSH155YMR288W VPS30Q02948 557 aa2.39□□□□□ -2.03
HSH155YMR288W YDL124WQ07551 312 aaKnown RBP2.39□□□□□ -2.03
HSH155YMR288W YOL098CQ12496 1037 aa2.39□□□□□ -2.03
HSH155YMR288W UBR2Q07963 1872 aa2.39□□□□□ -2.03
HSH155YMR288W CSF1Q12150 2958 aa2.39□□□□□ -2.03
HSH155YMR288W SAM35P14693 329 aa2.38□□□□□ -2.03
HSH155YMR288W GAL11P19659 1081 aa2.38□□□□□ -2.03
HSH155YMR288W YRO2P38079 344 aa2.38□□□□□ -2.03
HSH155YMR288W CCC2P38995 1004 aa2.38□□□□□ -2.03
HSH155YMR288W YGR117CP53270 476 aa2.38□□□□□ -2.03
HSH155YMR288W ERO1Q03103 563 aa2.38□□□□□ -2.03
HSH155YMR288W ESC2Q06340 456 aa2.38□□□□□ -2.03
HSH155YMR288W YKL069WP36088 180 aa2.38□□□□□ -2.03
HSH155YMR288W SPC42P36094 363 aa2.38□□□□□ -2.03
HSH155YMR288W SEA4P38164 1038 aa2.38□□□□□ -2.03
HSH155YMR288W GGA2P38817 585 aaKnown RBP2.38□□□□□ -2.03
HSH155YMR288W NUG1P40010 520 aaKnown RBP2.38□□□□□ -2.03
HSH155YMR288W SNO2P53823 222 aa2.38□□□□□ -2.03
HSH155YMR288W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
HSH155YMR288W RBA50Q04418 439 aa2.38□□□□□ -2.03
HSH155YMR288W DFG16Q99234 619 aa2.38□□□□□ -2.03
HSH155YMR288W SSM4P40318 1319 aa2.38□□□□□ -2.03
HSH155YMR288W RPP2AP05319 106 aaKnown RBP2.38□□□□□ -2.03
HSH155YMR288W VID30P53076 958 aa2.38□□□□□ -2.03
HSH155YMR288W SNF5P18480 905 aa2.37□□□□□ -2.03
HSH155YMR288W PBP1P53297 722 aaKnown RBP2.37□□□□□ -2.03
HSH155YMR288W MLP1Q02455 1875 aaKnown RBP2.37□□□□□ -2.03
HSH155YMR288W CAN1P04817 590 aa2.37□□□□□ -2.03
HSH155YMR288W LPD1P09624 499 aaKnown RBP2.37□□□□□ -2.03
HSH155YMR288W ENA1P13587 1091 aa2.37□□□□□ -2.03
HSH155YMR288W BAP2P38084 609 aa2.37□□□□□ -2.03
HSH155YMR288W PSP2P50109 593 aaKnown RBP2.37□□□□□ -2.03
HSH155YMR288W ENA2Q01896 1091 aa2.37□□□□□ -2.03
HSH155YMR288W BDF2Q07442 638 aa2.37□□□□□ -2.03
HSH155YMR288W FMP25Q08023 583 aa2.37□□□□□ -2.03
HSH155YMR288W YPL066WQ12194 479 aa2.37□□□□□ -2.03
HSH155YMR288W ENA5Q12691 1091 aa2.37□□□□□ -2.03
HSH155YMR288W SEC3P33332 1336 aaKnown RBP2.37□□□□□ -2.03
HSH155YMR288W PRP8P33334 2413 aaKnown RBP2.36□□□□□ -2.03
HSH155YMR288W CIT1P00890 479 aa2.36□□□□□ -2.03
HSH155YMR288W BI4P03879 638 aa2.36□□□□□ -2.03
HSH155YMR288W CBP1P07252 654 aa2.36□□□□□ -2.03
HSH155YMR288W CMP2P14747 604 aa2.36□□□□□ -2.03
HSH155YMR288W OSM1P21375 501 aaKnown RBP2.36□□□□□ -2.03
HSH155YMR288W RFA1P22336 621 aaKnown RBP2.36□□□□□ -2.03
HSH155YMR288W DOM34P33309 386 aa2.36□□□□□ -2.03
HSH155YMR288W SER1P33330 395 aaKnown RBP2.36□□□□□ -2.03
HSH155YMR288W LRG1P35688 1017 aa2.36□□□□□ -2.03
HSH155YMR288W OCA5P38738 679 aa2.36□□□□□ -2.03
HSH155YMR288W HUL5P53119 910 aa2.36□□□□□ -2.03
HSH155YMR288W NSE3Q05541 303 aa2.36□□□□□ -2.03
HSH155YMR288W FPR4Q06205 392 aaPredicted RBP2.36□□□□□ -2.03
HSH155YMR288W ESC8Q08119 714 aa2.36□□□□□ -2.03
HSH155YMR288W GIN4Q12263 1142 aa2.36□□□□□ -2.03
HSH155YMR288W GRX6Q12438 231 aa2.36□□□□□ -2.03
HSH155YMR288W LEU2P04173 364 aaPredicted RBP2.36□□□□□ -2.03
HSH155YMR288W TOM70P07213 617 aaKnown RBP2.36□□□□□ -2.03
HSH155YMR288W YCR015CP25616 317 aa2.36□□□□□ -2.03
HSH155YMR288W SLA2P33338 968 aa2.36□□□□□ -2.03
HSH155YMR288W YBP2P53169 641 aa2.36□□□□□ -2.03
HSH155YMR288W UBX5Q06682 500 aa2.36□□□□□ -2.03
HSH155YMR288W YLL058WQ12198 575 aa2.36□□□□□ -2.03
HSH155YMR288W TRA1P38811 3744 aa2.36□□□□□ -2.03
HSH155YMR288W RPL8BP29453 256 aaKnown RBP2.35□□□□□ -2.03
HSH155YMR288W SIP5P40210 489 aaKnown RBP2.35□□□□□ -2.03
HSH155YMR288W CCM1P48237 864 aaPredicted RBP2.35□□□□□ -2.03
HSH155YMR288W UTP8P53276 713 aaKnown RBP2.35□□□□□ -2.03
HSH155YMR288W RCL1Q08096 367 aaPredicted RBP2.35□□□□□ -2.03
HSH155YMR288W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
HSH155YMR288W LPX1Q12405 387 aaKnown RBP2.35□□□□□ -2.03
HSH155YMR288W FLO1P32768 1537 aa2.35□□□□□ -2.03
HSH155YMR288W FUN30P31380 1131 aa2.35□□□□□ -2.03
HSH155YMR288W RPC82P32349 654 aa2.35□□□□□ -2.03
HSH155YMR288W YFL054CP43549 646 aa2.35□□□□□ -2.03
HSH155YMR288W GUS1P46655 708 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
HSH155YMR288W NIT3P49954 291 aa2.35□□□□□ -2.03
HSH155YMR288W YGL082WP53155 381 aa2.35□□□□□ -2.03
HSH155YMR288W FLC1Q08967 793 aa2.35□□□□□ -2.03
HSH155YMR288W RPS9AO13516 197 aaKnown RBP2.35□□□□□ -2.03
HSH155YMR288W CYC1P00044 109 aaPredicted RBP2.35□□□□□ -2.03
HSH155YMR288W ACE2P21192 770 aa2.35□□□□□ -2.03
HSH155YMR288W DBP2P24783 546 aaKnown RBP2.35□□□□□ -2.03
HSH155YMR288W FRD1P32614 470 aaKnown RBP2.35□□□□□ -2.03
HSH155YMR288W ZRG8P40021 1076 aa2.35□□□□□ -2.03
HSH155YMR288W YER158CP40095 573 aa2.35□□□□□ -2.03
HSH155YMR288W RRT6P53117 311 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms