RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR3	YLR442C	CWC24	P53769	259 aa		2.67	□□□□□ -1.98
SIR3	YLR442C	ADA2	Q02336	434 aa		2.67	□□□□□ -1.98
SIR3	YLR442C	RRN5	Q02983	363 aa		2.67	□□□□□ -1.98
SIR3	YLR442C	BUL2	Q03758	920 aa	Known RBP	2.67	□□□□□ -1.98
SIR3	YLR442C	MSC6	Q08818	692 aa	Known RBP	2.67	□□□□□ -1.98
SIR3	YLR442C	CIR2	Q08822	631 aa		2.67	□□□□□ -1.98
SIR3	YLR442C	ALG6	Q12001	544 aa	Known RBP	2.67	□□□□□ -1.98
SIR3	YLR442C	SMC6	Q12749	1114 aa		2.67	□□□□□ -1.98
SIR3	YLR442C	ATP4	P05626	244 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	FAR1	P21268	830 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	MSH2	P25847	964 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	SSE1	P32589	693 aa	Known RBP	2.66	□□□□□ -1.98
SIR3	YLR442C	TOD6	P34219	525 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	NNK1	P36003	928 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	ZIM17	P42844	174 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	NCS2	P53923	493 aa	Predicted RBP	2.66	□□□□□ -1.98
SIR3	YLR442C	ALD6	P54115	500 aa	Known RBP	2.66	□□□□□ -1.98
SIR3	YLR442C	RSC4	Q02206	625 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	SVL3	Q03088	825 aa	Known RBP	2.66	□□□□□ -1.98
SIR3	YLR442C	RPN4	Q03465	531 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	CLU1	Q03690	1277 aa	Known RBP	2.66	□□□□□ -1.98
SIR3	YLR442C	SSQ1	Q05931	657 aa	Predicted RBP	2.66	□□□□□ -1.98
SIR3	YLR442C	CSR1	Q06705	408 aa	Known RBP	2.66	□□□□□ -1.98
SIR3	YLR442C	RKM1	Q08961	583 aa	Predicted RBP	2.66	□□□□□ -1.98
SIR3	YLR442C	TUS1	Q06412	1307 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	MPH2	P0CD99	609 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	RED1	P14291	827 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	FUR1	P18562	216 aa	Known RBP	2.66	□□□□□ -1.98
SIR3	YLR442C	CDC10	P25342	322 aa	Known RBP	2.66	□□□□□ -1.98
SIR3	YLR442C	RAD16	P31244	790 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	SEC8	P32855	1065 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
SIR3	YLR442C	PBY1	P38254	753 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	RRF1	P38771	230 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	LAM1	P38851	1228 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	YJL070C	P40361	888 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	NCS6	P53088	359 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	YGR045C	P53229	120 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	RTC4	P53850	401 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	REX2	P54964	269 aa	Known RBP	2.66	□□□□□ -1.98
SIR3	YLR442C	SEC5	P89102	971 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	TIM50	Q02776	476 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	YML083C	Q04526	418 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	ARR2	Q06597	130 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	PSR2	Q07949	397 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	YPL277C	Q08989	487 aa		2.66	□□□□□ -1.98
SIR3	YLR442C	RAD3	P06839	778 aa		2.65	□□□□□ -1.98
SIR3	YLR442C	DAL80	P26343	269 aa		2.65	□□□□□ -1.98
SIR3	YLR442C	SET3	P36124	751 aa		2.65	□□□□□ -1.98
SIR3	YLR442C	YLF2	P38746	405 aa		2.65	□□□□□ -1.98
SIR3	YLR442C	YHB1	P39676	399 aa	Known RBP	2.65	□□□□□ -1.98
SIR3	YLR442C	ALD5	P40047	520 aa	Known RBP	2.65	□□□□□ -1.98
SIR3	YLR442C	JEM1	P40358	645 aa		2.65	□□□□□ -1.98
SIR3	YLR442C	NDC80	P40460	691 aa		2.65	□□□□□ -1.98
SIR3	YLR442C	RBA50	Q04418	439 aa		2.65	□□□□□ -1.98
SIR3	YLR442C	YOR378W	Q08902	515 aa		2.65	□□□□□ -1.98
SIR3	YLR442C	YPL191C	Q08930	360 aa		2.65	□□□□□ -1.98
SIR3	YLR442C	APL4	Q12028	832 aa		2.65	□□□□□ -1.98
SIR3	YLR442C	TEF1	P02994	458 aa	Known RBP	2.65	□□□□□ -1.99
SIR3	YLR442C	RPS13	P05756	151 aa	Known RBP	2.65	□□□□□ -1.99
SIR3	YLR442C	CDC16	P09798	840 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	HEM1	P09950	548 aa	Predicted RBP	2.65	□□□□□ -1.99
SIR3	YLR442C	SEC15	P22224	910 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	HIR1	P32479	840 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	RPN2	P32565	945 aa	Known RBP	2.65	□□□□□ -1.99
SIR3	YLR442C	MRP4	P32902	394 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	STO1	P34160	861 aa	Known RBP	2.65	□□□□□ -1.99
SIR3	YLR442C	NUP120	P35729	1037 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	RIM4	P38741	713 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	YHR219W	P38900	624 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	VPS45	P38932	577 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	SHC1	P39000	512 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	PCL7	P40186	285 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	SAE2	P46946	345 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	PEX8	P53248	589 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	MDR1	P53258	950 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	RSC3	Q06639	885 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	PGI1	P12709	554 aa	Known RBP	2.65	□□□□□ -1.99
SIR3	YLR442C	PUT4	P15380	627 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	PMA2	P19657	947 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	CTS1	P29029	562 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	AFR1	P33304	620 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	RIB7	P33312	244 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	BMH2	P34730	273 aa	Known RBP	2.65	□□□□□ -1.99
SIR3	YLR442C	YKR018C	P36114	725 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	YHR131C	P38835	850 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	VPS41	P38959	992 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	GTS1	P40956	396 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	EPL1	P43572	832 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	ROK1	P45818	564 aa	Predicted RBP	2.65	□□□□□ -1.99
SIR3	YLR442C	LIA1	P47120	325 aa	Known RBP	2.65	□□□□□ -1.99
SIR3	YLR442C	UBA2	P52488	636 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	RET3	P53600	189 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	UBX4	P54730	416 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	SPN1	Q06505	410 aa	Predicted RBP	2.65	□□□□□ -1.99
SIR3	YLR442C	YLR125W	Q12138	136 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	SFI1	Q12369	946 aa		2.65	□□□□□ -1.99
SIR3	YLR442C	RRP36	Q12481	300 aa	Predicted RBP	2.65	□□□□□ -1.99
SIR3	YLR442C	PHO8	P11491	566 aa		2.64	□□□□□ -1.99
SIR3	YLR442C	SEC23	P15303	768 aa	Known RBP	2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms