RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W GCD1P09032 578 aaPredicted RBP6.05□□□□□ -1.44
VPS36YLR417W SST2P11972 698 aaKnown RBP6.05□□□□□ -1.44
VPS36YLR417W ZRG8P40021 1076 aa6.05□□□□□ -1.44
VPS36YLR417W PSP2P50109 593 aaKnown RBP6.05□□□□□ -1.44
VPS36YLR417W ZIP2P53061 704 aa6.05□□□□□ -1.44
VPS36YLR417W YNL034WP53963 612 aa6.05□□□□□ -1.44
VPS36YLR417W YNL018CP53976 612 aa6.05□□□□□ -1.44
VPS36YLR417W RPN7Q06103 429 aaKnown RBP6.05□□□□□ -1.44
VPS36YLR417W MCA1Q08601 432 aa6.05□□□□□ -1.44
VPS36YLR417W HAL9Q12180 1030 aa6.05□□□□□ -1.44
VPS36YLR417W FBP1P09201 348 aa6.04□□□□□ -1.44
VPS36YLR417W VPS24P36095 224 aaKnown RBP6.04□□□□□ -1.44
VPS36YLR417W YKR018CP36114 725 aa6.04□□□□□ -1.44
VPS36YLR417W YKR051WP36142 418 aa6.04□□□□□ -1.44
VPS36YLR417W ICP55P40051 511 aa6.04□□□□□ -1.44
VPS36YLR417W YGR130CP53278 816 aa6.04□□□□□ -1.44
VPS36YLR417W PBP1P53297 722 aaKnown RBP6.04□□□□□ -1.44
VPS36YLR417W ORC3P54790 616 aa6.04□□□□□ -1.44
VPS36YLR417W YPL062WQ02781 134 aa6.04□□□□□ -1.44
VPS36YLR417W VMS1Q04311 632 aaKnown RBP6.04□□□□□ -1.44
VPS36YLR417W SSL1Q04673 461 aaPredicted RBP6.04□□□□□ -1.44
VPS36YLR417W YPL277CQ08989 487 aa6.04□□□□□ -1.44
VPS36YLR417W LPX1Q12405 387 aaKnown RBP6.04□□□□□ -1.44
VPS36YLR417W MPD2Q99316 277 aa6.04□□□□□ -1.44
VPS36YLR417W ATG19P35193 415 aa6.03□□□□□ -1.44
VPS36YLR417W TRZ1P36159 838 aaPredicted RBP6.03□□□□□ -1.44
VPS36YLR417W EMP65P40085 556 aa6.03□□□□□ -1.44
VPS36YLR417W DUS1P53759 423 aaKnown RBP6.02□□□□□ -1.45
VPS36YLR417W YLR149CQ99296 730 aa6.02□□□□□ -1.45
VPS36YLR417W CYC7P00045 113 aa6.02□□□□□ -1.45
VPS36YLR417W CMP2P14747 604 aa6.02□□□□□ -1.45
VPS36YLR417W DAL3P32459 195 aa6.02□□□□□ -1.45
VPS36YLR417W HSP78P33416 811 aa6.02□□□□□ -1.45
VPS36YLR417W FLR1P38124 548 aa6.02□□□□□ -1.45
VPS36YLR417W BIT2P38346 545 aa6.02□□□□□ -1.45
VPS36YLR417W HXT6P39003 570 aaKnown RBP6.02□□□□□ -1.45
VPS36YLR417W HXT7P39004 570 aa6.02□□□□□ -1.45
VPS36YLR417W MND2P40577 368 aa6.02□□□□□ -1.45
VPS36YLR417W SKY1Q03656 742 aa6.02□□□□□ -1.45
VPS36YLR417W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
VPS36YLR417W HFI1Q12060 488 aa6.02□□□□□ -1.45
VPS36YLR417W APM4Q99186 491 aa6.02□□□□□ -1.45
VPS36YLR417W KAR1P11927 433 aa6.01□□□□□ -1.45
VPS36YLR417W HEM12P32347 362 aaPredicted RBP6.01□□□□□ -1.45
VPS36YLR417W MAL31P38156 614 aa6.01□□□□□ -1.45
VPS36YLR417W POA1P38218 177 aa6.01□□□□□ -1.45
VPS36YLR417W SLD3P53135 668 aa6.01□□□□□ -1.45
VPS36YLR417W PTA1Q01329 785 aaPredicted RBP6.01□□□□□ -1.45
VPS36YLR417W CEF1Q03654 590 aaPredicted RBP6.01□□□□□ -1.45
VPS36YLR417W Q0142Q9ZZW4 58 aa6.01□□□□□ -1.45
VPS36YLR417W SPE1P08432 466 aa6□□□□□ -1.45
VPS36YLR417W MNN4P36044 1178 aa6□□□□□ -1.45
VPS36YLR417W PCL10P53124 433 aa6□□□□□ -1.45
VPS36YLR417W SPC105P53148 917 aa6□□□□□ -1.45
VPS36YLR417W YHM2Q04013 314 aa6□□□□□ -1.45
VPS36YLR417W PHM6Q05637 104 aa6□□□□□ -1.45
VPS36YLR417W CYC1P00044 109 aaPredicted RBP5.99□□□□□ -1.45
VPS36YLR417W YEF3P16521 1044 aaKnown RBP5.99□□□□□ -1.45
VPS36YLR417W SWE1P32944 819 aa5.99□□□□□ -1.45
VPS36YLR417W NIC96P34077 839 aa5.99□□□□□ -1.45
VPS36YLR417W CTF8P38877 133 aa5.99□□□□□ -1.45
VPS36YLR417W PIP2P52960 996 aa5.99□□□□□ -1.45
VPS36YLR417W MET14Q02196 202 aa5.99□□□□□ -1.45
VPS36YLR417W DCS2Q12123 353 aa5.99□□□□□ -1.45
VPS36YLR417W GAL10P04397 699 aa5.99□□□□□ -1.45
VPS36YLR417W COX11P19516 300 aaKnown RBP5.99□□□□□ -1.45
VPS36YLR417W OAF3P36023 863 aa5.99□□□□□ -1.45
VPS36YLR417W SDP1P40479 209 aa5.99□□□□□ -1.45
VPS36YLR417W BFA1P47113 574 aa5.99□□□□□ -1.45
VPS36YLR417W GAL1P04385 528 aa5.98□□□□□ -1.45
VPS36YLR417W RPP2AP05319 106 aaKnown RBP5.98□□□□□ -1.45
VPS36YLR417W RPS21AP0C0V8 87 aaKnown RBP5.98□□□□□ -1.45
VPS36YLR417W SSY5P47002 699 aa5.98□□□□□ -1.45
VPS36YLR417W YJR039WP47107 1121 aa5.98□□□□□ -1.45
VPS36YLR417W ATG16Q03818 150 aa5.98□□□□□ -1.45
VPS36YLR417W YPR027CQ12079 277 aa5.98□□□□□ -1.45
VPS36YLR417W RPS21BQ3E754 87 aaKnown RBP5.98□□□□□ -1.45
VPS36YLR417W DPB3P27344 201 aa5.97□□□□□ -1.45
VPS36YLR417W PTP2P29461 750 aa5.97□□□□□ -1.45
VPS36YLR417W FUI1P38196 639 aa5.97□□□□□ -1.45
VPS36YLR417W MIP6P38760 659 aaKnown RBP5.97□□□□□ -1.45
VPS36YLR417W SSZ1P38788 538 aaKnown RBP5.97□□□□□ -1.45
VPS36YLR417W YHR078WP38799 552 aa5.97□□□□□ -1.45
VPS36YLR417W UBX4P54730 416 aa5.97□□□□□ -1.45
VPS36YLR417W PEX15Q08215 383 aa5.97□□□□□ -1.45
VPS36YLR417W RRP6Q12149 733 aaKnown RBP5.97□□□□□ -1.45
VPS36YLR417W PIF1P07271 859 aa5.96□□□□□ -1.45
VPS36YLR417W SEC65P29478 273 aa5.96□□□□□ -1.45
VPS36YLR417W YKL133CP36066 463 aa5.96□□□□□ -1.45
VPS36YLR417W URM1P40554 99 aaPredicted RBP5.96□□□□□ -1.45
VPS36YLR417W GPD1Q00055 391 aaKnown RBP5.96□□□□□ -1.45
VPS36YLR417W ADY3Q07732 790 aa5.96□□□□□ -1.45
VPS36YLR417W TPO1Q07824 586 aa5.96□□□□□ -1.45
VPS36YLR417W MED7Q08278 222 aa5.96□□□□□ -1.45
VPS36YLR417W PUS1Q12211 544 aaKnown RBP5.96□□□□□ -1.45
VPS36YLR417W TRP3P00937 484 aa5.96□□□□□ -1.46
VPS36YLR417W VPS72Q03388 795 aa5.96□□□□□ -1.46
VPS36YLR417W KCC4P25389 1037 aa5.95□□□□□ -1.46
VPS36YLR417W YKU70P32807 602 aa5.95□□□□□ -1.46
VPS36YLR417W RIM4P38741 713 aa5.95□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms