RNA–Protein interactions for RNA: YLR114C

AVL9, Transcript of Conserved protein involved in exocytic transport from the Golgi, yeastyeast

Gene AVL9, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVL9YLR114C ATG16Q03818 150 aa8.01□□□□□ -1.13
AVL9YLR114C FAR8Q05040 523 aa8.01□□□□□ -1.13
AVL9YLR114C SUB2Q07478 446 aaKnown RBP8.01□□□□□ -1.13
AVL9YLR114C CDC11P32458 415 aa8.01□□□□□ -1.13
AVL9YLR114C TGL1P34163 548 aa8.01□□□□□ -1.13
AVL9YLR114C NCL1P38205 684 aaKnown RBP8.01□□□□□ -1.13
AVL9YLR114C GUD1Q07729 489 aa8.01□□□□□ -1.13
AVL9YLR114C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
AVL9YLR114C ACM1Q08981 209 aa8.01□□□□□ -1.13
AVL9YLR114C JIP3O13555 125 aa8□□□□□ -1.13
AVL9YLR114C POL3P15436 1097 aa8□□□□□ -1.13
AVL9YLR114C SRV2P17555 526 aaKnown RBP8□□□□□ -1.13
AVL9YLR114C MUD1P32605 298 aaKnown RBP8□□□□□ -1.13
AVL9YLR114C YTA12P40341 825 aa8□□□□□ -1.13
AVL9YLR114C ATG36P46983 293 aa8□□□□□ -1.13
AVL9YLR114C CLA4P48562 842 aa8□□□□□ -1.13
AVL9YLR114C TAM41P53230 385 aa8□□□□□ -1.13
AVL9YLR114C PTA1Q01329 785 aaPredicted RBP8□□□□□ -1.13
AVL9YLR114C CRD1Q07560 283 aa8□□□□□ -1.13
AVL9YLR114C NOB1Q08444 459 aaKnown RBP8□□□□□ -1.13
AVL9YLR114C CDC53Q12018 815 aaKnown RBP8□□□□□ -1.13
AVL9YLR114C DBF4P32325 704 aa8□□□□□ -1.13
AVL9YLR114C RRN6P32786 894 aa8□□□□□ -1.13
AVL9YLR114C YBL055CP34220 418 aaPredicted RBP8□□□□□ -1.13
AVL9YLR114C PBP2P38151 413 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
AVL9YLR114C ACA1P39970 489 aa8□□□□□ -1.13
AVL9YLR114C ASG1P40467 964 aa8□□□□□ -1.13
AVL9YLR114C YGR111WP53265 400 aa8□□□□□ -1.13
AVL9YLR114C YML037CQ03703 340 aa8□□□□□ -1.13
AVL9YLR114C SPH1Q06160 661 aa8□□□□□ -1.13
AVL9YLR114C CMS1Q07897 291 aaKnown RBP8□□□□□ -1.13
AVL9YLR114C KAR3P17119 729 aa7.99□□□□□ -1.13
AVL9YLR114C VPS35P34110 944 aa7.99□□□□□ -1.13
AVL9YLR114C RPC37P36121 282 aa7.99□□□□□ -1.13
AVL9YLR114C YBR062CP38239 180 aa7.99□□□□□ -1.13
AVL9YLR114C MSG5P38590 489 aa7.99□□□□□ -1.13
AVL9YLR114C ERC1P38767 581 aa7.99□□□□□ -1.13
AVL9YLR114C TDA10P42938 290 aa7.99□□□□□ -1.13
AVL9YLR114C CTR1P49573 406 aa7.99□□□□□ -1.13
AVL9YLR114C YGR117CP53270 476 aa7.99□□□□□ -1.13
AVL9YLR114C SHR3Q02774 210 aa7.99□□□□□ -1.13
AVL9YLR114C YDR222WQ04925 415 aa7.99□□□□□ -1.13
AVL9YLR114C MPC54Q08550 464 aa7.99□□□□□ -1.13
AVL9YLR114C HPR1P17629 752 aaKnown RBP7.99□□□□□ -1.13
AVL9YLR114C GAP1P19145 602 aaPredicted RBP7.99□□□□□ -1.13
AVL9YLR114C SFL1P20134 766 aa7.99□□□□□ -1.13
AVL9YLR114C ATG19P35193 415 aa7.99□□□□□ -1.13
AVL9YLR114C YKR018CP36114 725 aa7.99□□□□□ -1.13
AVL9YLR114C HEK2P38199 381 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
AVL9YLR114C VHC1P38329 1120 aa7.99□□□□□ -1.13
AVL9YLR114C RIX1P38883 763 aaPredicted RBP7.99□□□□□ -1.13
AVL9YLR114C ATG1P53104 897 aa7.99□□□□□ -1.13
AVL9YLR114C YGL039WP53183 348 aaKnown RBP7.99□□□□□ -1.13
AVL9YLR114C VPS16Q03308 798 aa7.99□□□□□ -1.13
AVL9YLR114C ATG20Q07528 640 aa7.99□□□□□ -1.13
AVL9YLR114C TY1B-AO13527 1196 aaKnown RBP7.98□□□□□ -1.13
AVL9YLR114C SAM1P10659 382 aaKnown RBP7.98□□□□□ -1.13
AVL9YLR114C SPO16P17122 198 aa7.98□□□□□ -1.13
AVL9YLR114C GAL11P19659 1081 aa7.98□□□□□ -1.13
AVL9YLR114C DAL2P25335 343 aa7.98□□□□□ -1.13
AVL9YLR114C PUF4P25339 888 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
AVL9YLR114C HEL1P36113 551 aa7.98□□□□□ -1.13
AVL9YLR114C SUB1P54000 292 aaKnown RBP7.98□□□□□ -1.13
AVL9YLR114C CBP1P07252 654 aa7.98□□□□□ -1.13
AVL9YLR114C RNA1P11745 407 aaKnown RBP7.98□□□□□ -1.13
AVL9YLR114C CBF1P17106 351 aa7.98□□□□□ -1.13
AVL9YLR114C SPC24Q04477 213 aa7.98□□□□□ -1.13
AVL9YLR114C DUS4Q06063 367 aa7.98□□□□□ -1.13
AVL9YLR114C YML002WP0CF17 737 aa7.97□□□□□ -1.13
AVL9YLR114C HEM15P16622 393 aa7.97□□□□□ -1.13
AVL9YLR114C GPI10P30777 616 aa7.97□□□□□ -1.13
AVL9YLR114C GLC3P32775 704 aa7.97□□□□□ -1.13
AVL9YLR114C COT1P32798 439 aa7.97□□□□□ -1.13
AVL9YLR114C CSG2P35206 410 aa7.97□□□□□ -1.13
AVL9YLR114C PHO86P46956 311 aa7.97□□□□□ -1.13
AVL9YLR114C PPM1Q04081 328 aa7.97□□□□□ -1.13
AVL9YLR114C YLR177WQ06251 628 aa7.97□□□□□ -1.13
AVL9YLR114C MAG2Q06436 670 aaKnown RBP7.97□□□□□ -1.13
AVL9YLR114C NCR1Q12200 1170 aa7.97□□□□□ -1.13
AVL9YLR114C ADE3P07245 946 aaKnown RBP7.96□□□□□ -1.13
AVL9YLR114C GCR1P07261 785 aa7.96□□□□□ -1.13
AVL9YLR114C PTC3P34221 468 aaKnown RBP7.96□□□□□ -1.13
AVL9YLR114C SSP1P38871 571 aa7.96□□□□□ -1.13
AVL9YLR114C YMR134WP40207 237 aa7.96□□□□□ -1.13
AVL9YLR114C ERV41Q04651 352 aa7.96□□□□□ -1.13
AVL9YLR114C RIB2Q12362 591 aaKnown RBP7.96□□□□□ -1.13
AVL9YLR114C RPS3P05750 240 aaKnown RBP7.96□□□□□ -1.14
AVL9YLR114C ILV2P07342 687 aaKnown RBP7.96□□□□□ -1.14
AVL9YLR114C SWH1P35845 1188 aa7.96□□□□□ -1.14
AVL9YLR114C MCR1P36060 302 aaKnown RBP7.96□□□□□ -1.14
AVL9YLR114C PMC1P38929 1173 aaPredicted RBP7.96□□□□□ -1.14
AVL9YLR114C AVT1P47082 602 aa7.96□□□□□ -1.14
AVL9YLR114C CPR7P47103 393 aa7.96□□□□□ -1.14
AVL9YLR114C HSH155P49955 971 aaKnown RBP7.96□□□□□ -1.14
AVL9YLR114C RPA49Q01080 415 aaPredicted RBP7.96□□□□□ -1.14
AVL9YLR114C ROD1Q02805 837 aa7.96□□□□□ -1.14
AVL9YLR114C ISA1Q07821 250 aaPredicted RBP7.96□□□□□ -1.14
AVL9YLR114C PMS1P14242 873 aa7.95□□□□□ -1.14
AVL9YLR114C CDC42P19073 191 aa7.95□□□□□ -1.14
AVL9YLR114C PRP4P20053 465 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms