RNA–Protein interactions for RNA: YLR033W

RSC58, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC58, Length 1,509 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC58	YLR033W	HPR1	P17629	752 aa	Known RBP	4.84	□□□□□ -1.63
RSC58	YLR033W	AAP1	P37898	856 aa	Known RBP	4.84	□□□□□ -1.63
RSC58	YLR033W	OSH3	P38713	996 aa	Known RBP	4.84	□□□□□ -1.63
RSC58	YLR033W	HXT13	P39924	564 aa		4.84	□□□□□ -1.63
RSC58	YLR033W	IRC8	P47046	822 aa		4.84	□□□□□ -1.63
RSC58	YLR033W	MSE1	P48525	536 aa		4.84	□□□□□ -1.63
RSC58	YLR033W	YGL140C	P53120	1219 aa		4.84	□□□□□ -1.63
RSC58	YLR033W	TIM50	Q02776	476 aa		4.84	□□□□□ -1.63
RSC58	YLR033W	HOS3	Q02959	697 aa	Known RBP	4.84	□□□□□ -1.63
RSC58	YLR033W	CRF1	Q04930	467 aa		4.84	□□□□□ -1.63
RSC58	YLR033W	ACK1	Q07622	623 aa	Predicted RBP	4.84	□□□□□ -1.63
RSC58	YLR033W	LAM4	P38800	1345 aa		4.84	□□□□□ -1.64
RSC58	YLR033W	YLR278C	Q05854	1341 aa		4.84	□□□□□ -1.64
RSC58	YLR033W	CYB2	P00175	591 aa		4.83	□□□□□ -1.64
RSC58	YLR033W	PHO4	P07270	312 aa	Known RBP	4.83	□□□□□ -1.64
RSC58	YLR033W	ENP2	P48234	707 aa	Known RBP	4.83	□□□□□ -1.64
RSC58	YLR033W	PIP2	P52960	996 aa		4.83	□□□□□ -1.64
RSC58	YLR033W	SUN4	P53616	420 aa		4.83	□□□□□ -1.64
RSC58	YLR033W	EST2	Q06163	884 aa		4.83	□□□□□ -1.64
RSC58	YLR033W	YGR117C	P53270	476 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	TNA1	P53322	534 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	TMA10	Q06177	86 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	TAH18	Q12181	623 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	PTC5	Q12511	572 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	GAL10	P04397	699 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	CBP1	P07252	654 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	CMP2	P14747	604 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	OPI1	P21957	404 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	HCM1	P25364	564 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	ASF1	P32447	279 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	BAP2	P38084	609 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	RRP8	P38961	392 aa	Known RBP	4.82	□□□□□ -1.64
RSC58	YLR033W	IOC3	P43596	787 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	MTC3	P53077	123 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	MCM6	P53091	1017 aa	Known RBP	4.82	□□□□□ -1.64
RSC58	YLR033W	PPM2	Q08282	695 aa		4.82	□□□□□ -1.64
RSC58	YLR033W	PGA3	Q12746	312 aa	Known RBP	4.82	□□□□□ -1.64
RSC58	YLR033W	CHO2	P05374	869 aa	Known RBP	4.81	□□□□□ -1.64
RSC58	YLR033W	DED1	P06634	604 aa	Known RBP	4.81	□□□□□ -1.64
RSC58	YLR033W	COQ1	P18900	473 aa		4.81	□□□□□ -1.64
RSC58	YLR033W	SRM1	P21827	482 aa		4.81	□□□□□ -1.64
RSC58	YLR033W	LST4	P34239	828 aa		4.81	□□□□□ -1.64
RSC58	YLR033W	YPT53	P36019	220 aa		4.81	□□□□□ -1.64
RSC58	YLR033W	KRI1	P42846	591 aa	Known RBP	4.81	□□□□□ -1.64
RSC58	YLR033W	CDC20	P26309	610 aa		4.8	□□□□□ -1.64
RSC58	YLR033W	IMP2'	P32351	346 aa		4.8	□□□□□ -1.64
RSC58	YLR033W	DOM34	P33309	386 aa		4.8	□□□□□ -1.64
RSC58	YLR033W	DAK2	P43550	591 aa		4.8	□□□□□ -1.64
RSC58	YLR033W	YPL260W	Q08977	551 aa		4.8	□□□□□ -1.64
RSC58	YLR033W	KEL3	Q08979	651 aa	Predicted RBP	4.8	□□□□□ -1.64
RSC58	YLR033W	SNF5	P18480	905 aa		4.79	□□□□□ -1.64
RSC58	YLR033W	RPT1	P33299	467 aa	Known RBP	4.79	□□□□□ -1.64
RSC58	YLR033W	VPS35	P34110	944 aa		4.79	□□□□□ -1.64
RSC58	YLR033W	ALG3	P38179	458 aa		4.79	□□□□□ -1.64
RSC58	YLR033W	PIK1	P39104	1066 aa		4.79	□□□□□ -1.64
RSC58	YLR033W	RSM24	Q03976	319 aa		4.79	□□□□□ -1.64
RSC58	YLR033W	MRD1	Q06106	887 aa	Known RBP	4.79	□□□□□ -1.64
RSC58	YLR033W	SSF2	Q12153	453 aa	Predicted RBP	4.79	□□□□□ -1.64
RSC58	YLR033W	PMA1	P05030	918 aa	Known RBP	4.78	□□□□□ -1.64
RSC58	YLR033W	TPM1	P17536	199 aa	Known RBP	4.78	□□□□□ -1.64
RSC58	YLR033W	GCD6	P32501	712 aa	Known RBP	4.78	□□□□□ -1.64
RSC58	YLR033W	SEC8	P32855	1065 aa		4.78	□□□□□ -1.64
RSC58	YLR033W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
RSC58	YLR033W	MGE1	P38523	228 aa		4.78	□□□□□ -1.64
RSC58	YLR033W	KEL1	P38853	1164 aa	Known RBP	4.78	□□□□□ -1.64
RSC58	YLR033W	RTS1	P38903	757 aa		4.78	□□□□□ -1.64
RSC58	YLR033W	VID27	P40157	782 aa		4.78	□□□□□ -1.64
RSC58	YLR033W	YFL054C	P43549	646 aa		4.78	□□□□□ -1.64
RSC58	YLR033W	MNN10	P50108	393 aa	Known RBP	4.78	□□□□□ -1.64
RSC58	YLR033W	PHO23	P50947	330 aa		4.78	□□□□□ -1.64
RSC58	YLR033W	RPS15	Q01855	142 aa	Known RBP	4.78	□□□□□ -1.64
RSC58	YLR033W	ESF1	Q06344	628 aa	Known RBP	4.78	□□□□□ -1.64
RSC58	YLR033W	RXT3	Q07458	294 aa		4.78	□□□□□ -1.64
RSC58	YLR033W	GPB1	Q08886	897 aa		4.78	□□□□□ -1.64
RSC58	YLR033W	PCL8	Q08966	492 aa		4.78	□□□□□ -1.64
RSC58	YLR033W	RAD53	P22216	821 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	YBL028C	P38202	106 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	RFC5	P38251	354 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	PEA2	P40091	420 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	YJR107W	P47145	328 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	SNU71	P53207	620 aa	Known RBP	4.77	□□□□□ -1.65
RSC58	YLR033W	HDA1	P53973	706 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	OYE2	Q03558	400 aa	Known RBP	4.77	□□□□□ -1.65
RSC58	YLR033W	SPN1	Q06505	410 aa	Predicted RBP	4.77	□□□□□ -1.65
RSC58	YLR033W	YDL124W	Q07551	312 aa	Known RBP	4.77	□□□□□ -1.65
RSC58	YLR033W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
RSC58	YLR033W	RAD61	Q99359	647 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	MYO1	P08964	1928 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	RNR2	P09938	399 aa	Known RBP	4.77	□□□□□ -1.65
RSC58	YLR033W	PEP3	P27801	918 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	PRO3	P32263	286 aa	Known RBP	4.77	□□□□□ -1.65
RSC58	YLR033W	RER2	P35196	286 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	CRG1	P38892	291 aa	RIP-Chip data	4.77	□□□□□ -1.65	not detected
RSC58	YLR033W	PNT1	P38969	423 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	VID28	P40547	921 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	ADI1	Q03677	179 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	NTO1	Q12311	748 aa		4.77	□□□□□ -1.65
RSC58	YLR033W	ACE2	P21192	770 aa		4.76	□□□□□ -1.65
RSC58	YLR033W	RIT1	P23796	513 aa		4.76	□□□□□ -1.65
RSC58	YLR033W	MCM2	P29469	868 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms