RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C TMT1P32643 299 aa3.73□□□□□ -1.81
RPL40BYKR094C YBR284WP38150 797 aa3.73□□□□□ -1.81
RPL40BYKR094C SAK1P38990 1142 aa3.73□□□□□ -1.81
RPL40BYKR094C PZF1P39933 429 aa3.73□□□□□ -1.81
RPL40BYKR094C IRR1P40541 1150 aa3.73□□□□□ -1.81
RPL40BYKR094C CYS3P31373 394 aaKnown RBP3.72□□□□□ -1.81
RPL40BYKR094C BCD1P38772 366 aa3.72□□□□□ -1.81
RPL40BYKR094C FMP52P40008 231 aa3.72□□□□□ -1.81
RPL40BYKR094C PFA3P42836 336 aa3.72□□□□□ -1.81
RPL40BYKR094C SSL2Q00578 843 aa3.72□□□□□ -1.81
RPL40BYKR094C ENV7Q12003 364 aa3.72□□□□□ -1.81
RPL40BYKR094C YOR022CQ12204 715 aa3.72□□□□□ -1.81
RPL40BYKR094C YLR415CO13578 112 aa3.71□□□□□ -1.82
RPL40BYKR094C LAT1P12695 482 aaKnown RBP3.71□□□□□ -1.82
RPL40BYKR094C PRP9P19736 530 aaKnown RBP3.71□□□□□ -1.82
RPL40BYKR094C DMC1P25453 334 aa3.71□□□□□ -1.82
RPL40BYKR094C NGG1P32494 702 aa3.71□□□□□ -1.82
RPL40BYKR094C HOS4P40480 1083 aa3.71□□□□□ -1.82
RPL40BYKR094C CCT7P42943 550 aaKnown RBP3.71□□□□□ -1.82
RPL40BYKR094C PFD1P46988 109 aa3.71□□□□□ -1.82
RPL40BYKR094C HSV2P50079 448 aaPredicted RBP3.71□□□□□ -1.82
RPL40BYKR094C TEL2P53038 688 aa3.71□□□□□ -1.82
RPL40BYKR094C SMX3P54999 86 aaPredicted RBP3.71□□□□□ -1.82
RPL40BYKR094C TGL5Q12043 749 aa3.71□□□□□ -1.82
RPL40BYKR094C EMP70P32802 667 aa3.7□□□□□ -1.82
RPL40BYKR094C YBR184WP38299 523 aa3.7□□□□□ -1.82
RPL40BYKR094C YJL206CP39529 758 aa3.7□□□□□ -1.82
RPL40BYKR094C SSY5P47002 699 aa3.7□□□□□ -1.82
RPL40BYKR094C DAM1P53267 343 aa3.7□□□□□ -1.82
RPL40BYKR094C JIP5Q06214 492 aaPredicted RBP3.7□□□□□ -1.82
RPL40BYKR094C SPO11P23179 398 aa3.69□□□□□ -1.82
RPL40BYKR094C SPF1P39986 1215 aaKnown RBP3.69□□□□□ -1.82
RPL40BYKR094C ALR2P43553 858 aa3.69□□□□□ -1.82
RPL40BYKR094C GLO1P50107 326 aa3.69□□□□□ -1.82
RPL40BYKR094C UBC11P52492 156 aa3.69□□□□□ -1.82
RPL40BYKR094C PRC1P00729 532 aa3.68□□□□□ -1.82
RPL40BYKR094C MSD1P15179 658 aaKnown RBP3.68□□□□□ -1.82
RPL40BYKR094C DAL7P21826 554 aa3.68□□□□□ -1.82
RPL40BYKR094C HIR1P32479 840 aa3.68□□□□□ -1.82
RPL40BYKR094C APM1Q00776 475 aaPredicted RBP3.68□□□□□ -1.82
RPL40BYKR094C TDA5Q06417 326 aaKnown RBP3.68□□□□□ -1.82
RPL40BYKR094C TAF3Q12297 353 aa3.68□□□□□ -1.82
RPL40BYKR094C NAP1P25293 417 aaKnown RBP3.67□□□□□ -1.82
RPL40BYKR094C YCL002CP25565 263 aa3.67□□□□□ -1.82
RPL40BYKR094C PET10P36139 283 aa3.67□□□□□ -1.82
RPL40BYKR094C SIC1P38634 284 aa3.67□□□□□ -1.82
RPL40BYKR094C VAC8P39968 578 aa3.67□□□□□ -1.82
RPL40BYKR094C NOG2P53742 486 aaKnown RBP3.67□□□□□ -1.82
RPL40BYKR094C SEC5P89102 971 aa3.67□□□□□ -1.82
RPL40BYKR094C LRS4Q04087 347 aaKnown RBP3.67□□□□□ -1.82
RPL40BYKR094C MRI1Q06489 411 aaKnown RBP3.67□□□□□ -1.82
RPL40BYKR094C GPR1Q12361 961 aa3.67□□□□□ -1.82
RPL40BYKR094C TOP3P13099 656 aa3.66□□□□□ -1.82
RPL40BYKR094C CDC11P32458 415 aa3.66□□□□□ -1.82
RPL40BYKR094C RSC3Q06639 885 aa3.66□□□□□ -1.82
RPL40BYKR094C UBX5Q06682 500 aa3.66□□□□□ -1.82
RPL40BYKR094C YEL020CP39994 560 aa3.65□□□□□ -1.83
RPL40BYKR094C NDC80P40460 691 aa3.65□□□□□ -1.83
RPL40BYKR094C TAD1P53065 400 aa3.65□□□□□ -1.83
RPL40BYKR094C ALD6P54115 500 aaKnown RBP3.65□□□□□ -1.83
RPL40BYKR094C FMP25Q08023 583 aa3.65□□□□□ -1.83
RPL40BYKR094C HBN1Q96VH4 193 aa3.65□□□□□ -1.83
RPL40BYKR094C ORC2P32833 620 aa3.64□□□□□ -1.83
RPL40BYKR094C NIT3P49954 291 aa3.64□□□□□ -1.83
RPL40BYKR094C TEX1P53851 422 aaKnown RBP3.64□□□□□ -1.83
RPL40BYKR094C ATG11Q12527 1178 aa3.64□□□□□ -1.83
RPL40BYKR094C SAP190P36123 1033 aa3.63□□□□□ -1.83
RPL40BYKR094C UBS1P38290 277 aa3.63□□□□□ -1.83
RPL40BYKR094C BAP3P41815 604 aa3.63□□□□□ -1.83
RPL40BYKR094C YAP1802P53309 568 aa3.63□□□□□ -1.83
RPL40BYKR094C THI21Q08975 551 aa3.63□□□□□ -1.83
RPL40BYKR094C SIR3P06701 978 aa3.62□□□□□ -1.83
RPL40BYKR094C REV7P38927 245 aa3.62□□□□□ -1.83
RPL40BYKR094C GYP8P43570 497 aa3.62□□□□□ -1.83
RPL40BYKR094C UTP8P53276 713 aaKnown RBP3.62□□□□□ -1.83
RPL40BYKR094C RIM13Q03792 727 aa3.62□□□□□ -1.83
RPL40BYKR094C PYC1P11154 1178 aaKnown RBP3.61□□□□□ -1.83
RPL40BYKR094C HOM2P13663 365 aaKnown RBP3.61□□□□□ -1.83
RPL40BYKR094C EMC3P36039 253 aa3.61□□□□□ -1.83
RPL40BYKR094C YBR259WP38338 688 aa3.61□□□□□ -1.83
RPL40BYKR094C BDH2P39713 417 aa3.61□□□□□ -1.83
RPL40BYKR094C MTR3P48240 250 aaPredicted RBP3.61□□□□□ -1.83
RPL40BYKR094C PAN2P53010 1115 aaPredicted RBP3.61□□□□□ -1.83
RPL40BYKR094C GAD1Q04792 585 aa3.61□□□□□ -1.83
RPL40BYKR094C SVF1Q05515 481 aa3.61□□□□□ -1.83
RPL40BYKR094C EAF1Q06337 982 aa3.61□□□□□ -1.83
RPL40BYKR094C RPN13O13563 156 aa3.6□□□□□ -1.83
RPL40BYKR094C GLG1P36143 616 aa3.6□□□□□ -1.83
RPL40BYKR094C SFB3P38810 929 aa3.6□□□□□ -1.83
RPL40BYKR094C CCT3P39077 534 aaKnown RBP3.6□□□□□ -1.83
RPL40BYKR094C GAT1P43574 510 aa3.6□□□□□ -1.83
RPL40BYKR094C YKL033W-AQ86ZR7 236 aa3.6□□□□□ -1.83
RPL40BYKR094C RPL8BP29453 256 aaKnown RBP3.59□□□□□ -1.83
RPL40BYKR094C SET5P38890 526 aaKnown RBP3.59□□□□□ -1.83
RPL40BYKR094C ARG2P40360 574 aa3.59□□□□□ -1.83
RPL40BYKR094C CTR1P49573 406 aa3.59□□□□□ -1.83
RPL40BYKR094C MTL1P53214 551 aa3.59□□□□□ -1.83
RPL40BYKR094C YGR283CP53336 341 aaPredicted RBP3.59□□□□□ -1.83
RPL40BYKR094C OSW1Q08692 278 aa3.59□□□□□ -1.83
RPL40BYKR094C VPS34P22543 875 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms