RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W RPL4BP49626 362 aaKnown RBP12.58□□□□□ -0.4
TCD2YKL027W ALG11P53954 548 aaKnown RBP12.58□□□□□ -0.4
TCD2YKL027W TBF1Q02457 562 aa12.58□□□□□ -0.4
TCD2YKL027W CWC21Q03375 135 aaKnown RBP12.58□□□□□ -0.4
TCD2YKL027W YPR078CQ06813 372 aa12.58□□□□□ -0.4
TCD2YKL027W YDL206WQ12424 762 aa12.58□□□□□ -0.4
TCD2YKL027W ASP3-2P0CX77 362 aa12.57□□□□□ -0.4
TCD2YKL027W ASP3-3P0CX78 362 aa12.57□□□□□ -0.4
TCD2YKL027W ASP3-4P0CX79 362 aa12.57□□□□□ -0.4
TCD2YKL027W ASP3-1P0CZ17 362 aa12.57□□□□□ -0.4
TCD2YKL027W SPC110P32380 944 aa12.57□□□□□ -0.4
TCD2YKL027W YER186CP40101 306 aa12.57□□□□□ -0.4
TCD2YKL027W ESL1P40456 1118 aa12.57□□□□□ -0.4
TCD2YKL027W ULI1P43604 169 aa12.57□□□□□ -0.4
TCD2YKL027W RGA2Q06407 1009 aa12.57□□□□□ -0.4
TCD2YKL027W IWR1Q07532 353 aaPredicted RBP12.57□□□□□ -0.4
TCD2YKL027W RRP6Q12149 733 aaKnown RBP12.57□□□□□ -0.4
TCD2YKL027W PUS1Q12211 544 aaKnown RBP12.57□□□□□ -0.4
TCD2YKL027W OSH2Q12451 1283 aa12.57□□□□□ -0.4
TCD2YKL027W KIP1P28742 1111 aa12.56□□□□□ -0.4
TCD2YKL027W XRS2P33301 854 aa12.56□□□□□ -0.4
TCD2YKL027W NIP100P33420 868 aa12.56□□□□□ -0.4
TCD2YKL027W MSC7P38694 644 aa12.56□□□□□ -0.4
TCD2YKL027W YHR054CP38780 354 aa12.56□□□□□ -0.4
TCD2YKL027W RTT107P38850 1070 aa12.56□□□□□ -0.4
TCD2YKL027W STR2P47164 639 aa12.56□□□□□ -0.4
TCD2YKL027W ESBP6P53918 673 aa12.56□□□□□ -0.4
TCD2YKL027W DNL4Q08387 944 aaPredicted RBP12.56□□□□□ -0.4
TCD2YKL027W HMI1Q12039 706 aa12.56□□□□□ -0.4
TCD2YKL027W RSA4P25382 515 aaKnown RBP12.55□□□□□ -0.4
TCD2YKL027W SMC2P38989 1170 aaKnown RBP12.55□□□□□ -0.4
TCD2YKL027W UBP3Q01477 912 aaKnown RBP RIP-Chip data12.55□□□□□ -0.4not detected
TCD2YKL027W UME1Q03010 460 aa12.55□□□□□ -0.4
TCD2YKL027W YOR022CQ12204 715 aa12.55□□□□□ -0.4
TCD2YKL027W IME1P21190 360 aa12.54□□□□□ -0.4
TCD2YKL027W RAD54P32863 898 aa12.54□□□□□ -0.4
TCD2YKL027W SMC1P32908 1225 aa12.54□□□□□ -0.4
TCD2YKL027W SLX1P38324 304 aa12.54□□□□□ -0.4
TCD2YKL027W KIC1P38692 1080 aa12.54□□□□□ -0.4
TCD2YKL027W CEF1Q03654 590 aaPredicted RBP12.54□□□□□ -0.4
TCD2YKL027W ATG9Q12142 997 aa12.54□□□□□ -0.4
TCD2YKL027W LAA1P39526 2014 aa12.53□□□□□ -0.4
TCD2YKL027W CYC8P14922 966 aa12.53□□□□□ -0.4
TCD2YKL027W CDC42P19073 191 aa12.53□□□□□ -0.4
TCD2YKL027W COX11P19516 300 aaKnown RBP12.53□□□□□ -0.4
TCD2YKL027W BIO2P32451 375 aa12.53□□□□□ -0.4
TCD2YKL027W CSE2P33308 149 aa12.53□□□□□ -0.4
TCD2YKL027W YAP5P40574 245 aa12.53□□□□□ -0.4
TCD2YKL027W CPR7P47103 393 aa12.53□□□□□ -0.4
TCD2YKL027W EAR1Q03212 550 aa12.53□□□□□ -0.4
TCD2YKL027W STE20Q03497 939 aaKnown RBP12.53□□□□□ -0.4
TCD2YKL027W NEW1Q08972 1196 aaKnown RBP12.53□□□□□ -0.4
TCD2YKL027W UBR2Q07963 1872 aa12.52□□□□□ -0.4
TCD2YKL027W MSD1P15179 658 aaKnown RBP12.52□□□□□ -0.41
TCD2YKL027W CAD1P24813 409 aaKnown RBP12.52□□□□□ -0.41
TCD2YKL027W CYS3P31373 394 aaKnown RBP12.52□□□□□ -0.41
TCD2YKL027W CBF2P32504 956 aa12.52□□□□□ -0.41
TCD2YKL027W MRPL7P36519 292 aa12.52□□□□□ -0.41
TCD2YKL027W PTC4P38089 393 aa12.52□□□□□ -0.41
TCD2YKL027W BUD16P39988 312 aa12.52□□□□□ -0.41
TCD2YKL027W JHD1P40034 492 aa12.52□□□□□ -0.41
TCD2YKL027W KAP123P40069 1113 aaKnown RBP12.52□□□□□ -0.41
TCD2YKL027W PPM1Q04081 328 aa12.52□□□□□ -0.41
TCD2YKL027W YLR455WQ06188 304 aa12.52□□□□□ -0.41
TCD2YKL027W YCG1Q06680 1035 aa12.52□□□□□ -0.41
TCD2YKL027W SDH5Q08230 162 aa12.52□□□□□ -0.41
TCD2YKL027W ABP140Q08641 628 aaKnown RBP12.52□□□□□ -0.41
TCD2YKL027W PPR1P07272 904 aaPredicted RBP12.51□□□□□ -0.41
TCD2YKL027W TUP1P16649 713 aa12.51□□□□□ -0.41
TCD2YKL027W RSC8P43609 557 aaKnown RBP12.51□□□□□ -0.41
TCD2YKL027W NOP13P53883 403 aaKnown RBP RIP-Chip data12.51□□□□□ -0.41not detected
TCD2YKL027W YML082WQ04533 649 aaKnown RBP12.51□□□□□ -0.41
TCD2YKL027W TSR1Q07381 788 aaKnown RBP12.51□□□□□ -0.41
TCD2YKL027W CTF3Q12748 733 aa12.51□□□□□ -0.41
TCD2YKL027W SPO12P17123 173 aa12.5□□□□□ -0.41
TCD2YKL027W SCJ1P25303 377 aa12.5□□□□□ -0.41
TCD2YKL027W HEL1P36113 551 aa12.5□□□□□ -0.41
TCD2YKL027W HXT8P40886 569 aa12.5□□□□□ -0.41
TCD2YKL027W IES1P43579 692 aa12.5□□□□□ -0.41
TCD2YKL027W ERG5P54781 538 aa12.5□□□□□ -0.41
TCD2YKL027W OPY2Q06810 360 aa12.5□□□□□ -0.41
TCD2YKL027W APL4Q12028 832 aa12.5□□□□□ -0.41
TCD2YKL027W RRT12P25381 491 aa12.49□□□□□ -0.41
TCD2YKL027W CSG2P35206 410 aa12.49□□□□□ -0.41
TCD2YKL027W SAH1P39954 449 aaKnown RBP12.49□□□□□ -0.41
TCD2YKL027W OPT1P40897 799 aa12.49□□□□□ -0.41
TCD2YKL027W SBE2P42223 864 aaKnown RBP12.49□□□□□ -0.41
TCD2YKL027W VPS70P47161 811 aa12.49□□□□□ -0.41
TCD2YKL027W TAD1P53065 400 aa12.49□□□□□ -0.41
TCD2YKL027W CTR9P89105 1077 aa12.49□□□□□ -0.41
TCD2YKL027W EEB1Q02891 456 aa12.49□□□□□ -0.41
TCD2YKL027W UTP5Q04177 643 aaKnown RBP12.49□□□□□ -0.41
TCD2YKL027W GAL10P04397 699 aa12.48□□□□□ -0.41
TCD2YKL027W HIP1P06775 603 aa12.48□□□□□ -0.41
TCD2YKL027W SNF1P06782 633 aaKnown RBP12.48□□□□□ -0.41
TCD2YKL027W CDC33P07260 213 aaKnown RBP12.48□□□□□ -0.41
TCD2YKL027W PDC6P26263 563 aaKnown RBP12.48□□□□□ -0.41
TCD2YKL027W CDC11P32458 415 aa12.48□□□□□ -0.41
TCD2YKL027W APN2P38207 520 aa12.48□□□□□ -0.41
TCD2YKL027W YHR202WP38887 602 aa12.48□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms