RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W YDL206WQ12424 762 aa16.28■□□□□ 0.2
RTC3YHR087W VMA1P17255 1071 aaKnown RBP16.27■□□□□ 0.2
RTC3YHR087W AVT3P36062 692 aa16.27■□□□□ 0.2
RTC3YHR087W NPP2P39997 493 aa16.27■□□□□ 0.2
RTC3YHR087W MAD1P40957 749 aa16.27■□□□□ 0.2
RTC3YHR087W AVT1P47082 602 aa16.27■□□□□ 0.2
RTC3YHR087W OSW2Q12202 724 aa16.27■□□□□ 0.2
RTC3YHR087W SSD1P24276 1250 aaKnown RBP RIP-Chip data16.26■□□□□ 0.19not detected
RTC3YHR087W SEC21P32074 935 aaKnown RBP16.26■□□□□ 0.19
RTC3YHR087W KIC1P38692 1080 aa16.26■□□□□ 0.19
RTC3YHR087W KAP114P53067 1004 aa16.26■□□□□ 0.19
RTC3YHR087W TRM11Q12463 433 aa16.26■□□□□ 0.19
RTC3YHR087W ERG11P10614 530 aa16.25■□□□□ 0.19
RTC3YHR087W EFT1P32324 842 aaKnown RBP16.25■□□□□ 0.19
RTC3YHR087W NFU1P32860 256 aa16.25■□□□□ 0.19
RTC3YHR087W TIM23P32897 222 aa16.25■□□□□ 0.19
RTC3YHR087W BLI1P35727 113 aa16.25■□□□□ 0.19
RTC3YHR087W TDA3P38758 523 aa16.25■□□□□ 0.19
RTC3YHR087W CIN4P39110 191 aa16.25■□□□□ 0.19
RTC3YHR087W UTP14Q04500 899 aaKnown RBP16.25■□□□□ 0.19
RTC3YHR087W YML082WQ04533 649 aaKnown RBP16.25■□□□□ 0.19
RTC3YHR087W LDB19Q12502 818 aa16.25■□□□□ 0.19
RTC3YHR087W RMP1Q12530 201 aa16.25■□□□□ 0.19
RTC3YHR087W HEM1P09950 548 aaPredicted RBP16.24■□□□□ 0.19
RTC3YHR087W DPH2P32461 534 aa16.24■□□□□ 0.19
RTC3YHR087W VPS70P47161 811 aa16.24■□□□□ 0.19
RTC3YHR087W YMR018WQ04364 514 aa16.24■□□□□ 0.19
RTC3YHR087W YMR114CQ04471 368 aaKnown RBP16.24■□□□□ 0.19
RTC3YHR087W NOP6Q07623 225 aaKnown RBP16.24■□□□□ 0.19
RTC3YHR087W MSC6Q08818 692 aaKnown RBP16.24■□□□□ 0.19
RTC3YHR087W NUR1Q12066 484 aa16.24■□□□□ 0.19
RTC3YHR087W PAP1P29468 568 aaKnown RBP16.23■□□□□ 0.19
RTC3YHR087W GRS1P38088 690 aaKnown RBP16.23■□□□□ 0.19
RTC3YHR087W EAF5P39995 279 aa16.23■□□□□ 0.19
RTC3YHR087W SKP2P42843 763 aa16.23■□□□□ 0.19
RTC3YHR087W CWC22P53333 577 aaKnown RBP16.23■□□□□ 0.19
RTC3YHR087W RPA49Q01080 415 aaPredicted RBP16.23■□□□□ 0.19
RTC3YHR087W GPI13Q07830 1017 aa16.23■□□□□ 0.19
RTC3YHR087W PSY2P40164 858 aa16.22■□□□□ 0.19
RTC3YHR087W HSH155P49955 971 aaKnown RBP16.22■□□□□ 0.19
RTC3YHR087W YNL146WP53906 100 aa16.22■□□□□ 0.19
RTC3YHR087W VTI1Q04338 217 aa16.22■□□□□ 0.19
RTC3YHR087W SLX4Q12098 748 aa16.22■□□□□ 0.19
RTC3YHR087W YLL058WQ12198 575 aa16.22■□□□□ 0.19
RTC3YHR087W CDC33P07260 213 aaKnown RBP16.21■□□□□ 0.19
RTC3YHR087W GFA1P14742 717 aaKnown RBP16.21■□□□□ 0.19
RTC3YHR087W YUR1P26725 428 aa16.21■□□□□ 0.19
RTC3YHR087W GCG1P32656 232 aaKnown RBP16.21■□□□□ 0.19
RTC3YHR087W PIN4P34217 668 aaKnown RBP RIP-Chip data16.21■□□□□ 0.19not detected
RTC3YHR087W BCH2P36122 765 aa16.21■□□□□ 0.19
RTC3YHR087W TRZ1P36159 838 aaPredicted RBP16.21■□□□□ 0.19
RTC3YHR087W RCK2P38623 610 aa16.21■□□□□ 0.19
RTC3YHR087W RPS7BP48164 190 aaKnown RBP16.21■□□□□ 0.19
RTC3YHR087W ECM7Q06200 448 aa16.21■□□□□ 0.19
RTC3YHR087W NAT1P12945 854 aaKnown RBP16.2■□□□□ 0.18
RTC3YHR087W IRE1P32361 1115 aa16.2■□□□□ 0.18
RTC3YHR087W YKL050CP35736 922 aa16.2■□□□□ 0.18
RTC3YHR087W CUL3P53202 744 aa16.2■□□□□ 0.18
RTC3YHR087W CDC8P00572 216 aa16.19■□□□□ 0.18
RTC3YHR087W SWI3P32591 825 aa16.19■□□□□ 0.18
RTC3YHR087W FTR1P40088 404 aa16.19■□□□□ 0.18
RTC3YHR087W HIF1Q12373 385 aa16.19■□□□□ 0.18
RTC3YHR087W GIS3Q12418 502 aa16.19■□□□□ 0.18
RTC3YHR087W YDR524C-BQ3E6R4 66 aa16.19■□□□□ 0.18
RTC3YHR087W YKL068W-AQ3E826 78 aa16.19■□□□□ 0.18
RTC3YHR087W KIN82P25341 720 aa16.18■□□□□ 0.18
RTC3YHR087W SPC72P39723 622 aa16.18■□□□□ 0.18
RTC3YHR087W JJJ3P47138 172 aa16.18■□□□□ 0.18
RTC3YHR087W ASN1P49089 572 aaKnown RBP16.18■□□□□ 0.18
RTC3YHR087W JJJ1P53863 590 aa16.18■□□□□ 0.18
RTC3YHR087W EEB1Q02891 456 aa16.18■□□□□ 0.18
RTC3YHR087W HFI1Q12060 488 aa16.18■□□□□ 0.18
RTC3YHR087W MUD2P36084 527 aaKnown RBP16.17■□□□□ 0.18
RTC3YHR087W EXO5P38289 585 aa16.17■□□□□ 0.18
RTC3YHR087W MVP1P40959 511 aaKnown RBP16.17■□□□□ 0.18
RTC3YHR087W PSP2P50109 593 aaKnown RBP16.17■□□□□ 0.18
RTC3YHR087W YML020WQ03722 664 aa16.17■□□□□ 0.18
RTC3YHR087W IWR1Q07532 353 aaPredicted RBP16.17■□□□□ 0.18
RTC3YHR087W RPS3P05750 240 aaKnown RBP16.16■□□□□ 0.18
RTC3YHR087W GUA1P38625 525 aaKnown RBP16.16■□□□□ 0.18
RTC3YHR087W YHR131CP38835 850 aa16.16■□□□□ 0.18
RTC3YHR087W YTA12P40341 825 aa16.16■□□□□ 0.18
RTC3YHR087W CPR7P47103 393 aa16.16■□□□□ 0.18
RTC3YHR087W ORC5P50874 479 aa16.16■□□□□ 0.18
RTC3YHR087W DIG1Q03063 452 aaKnown RBP16.16■□□□□ 0.18
RTC3YHR087W PPM1Q04081 328 aa16.16■□□□□ 0.18
RTC3YHR087W ERV41Q04651 352 aa16.16■□□□□ 0.18
RTC3YHR087W POX1P13711 748 aa16.15■□□□□ 0.18
RTC3YHR087W CDC42P19073 191 aa16.15■□□□□ 0.18
RTC3YHR087W SCJ1P25303 377 aa16.15■□□□□ 0.18
RTC3YHR087W CSG2P35206 410 aa16.15■□□□□ 0.18
RTC3YHR087W SCD6P45978 349 aaKnown RBP RIP-Chip data16.15■□□□□ 0.18not detected
RTC3YHR087W RPC17P47076 161 aa16.15■□□□□ 0.18
RTC3YHR087W ECI1Q05871 280 aa16.15■□□□□ 0.18
RTC3YHR087W RGA2Q06407 1009 aa16.15■□□□□ 0.18
RTC3YHR087W RIO1Q12196 484 aaKnown RBP16.15■□□□□ 0.18
RTC3YHR087W ZRT2Q12436 422 aa16.15■□□□□ 0.18
RTC3YHR087W UBR2Q07963 1872 aa16.14■□□□□ 0.17
RTC3YHR087W DAS1P47005 663 aa16.14■□□□□ 0.17
RTC3YHR087W SCS3P53012 380 aa16.14■□□□□ 0.17
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms