RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W KTR2P33550 425 aa3.88□□□□□ -1.79
SPT6YGR116W MET18P40469 1032 aa3.88□□□□□ -1.79
SPT6YGR116W SDS3P40505 327 aa3.88□□□□□ -1.79
SPT6YGR116W STB1P42845 420 aa3.88□□□□□ -1.79
SPT6YGR116W APL6P46682 809 aa3.88□□□□□ -1.79
SPT6YGR116W RET3P53600 189 aa3.88□□□□□ -1.79
SPT6YGR116W YNL040WP53960 456 aaPredicted RBP3.88□□□□□ -1.79
SPT6YGR116W KTR5P53966 522 aaPredicted RBP3.88□□□□□ -1.79
SPT6YGR116W TDA9Q04545 1251 aa3.88□□□□□ -1.79
SPT6YGR116W RIB2Q12362 591 aaKnown RBP3.88□□□□□ -1.79
SPT6YGR116W MRF1P30775 413 aaPredicted RBP3.87□□□□□ -1.79
SPT6YGR116W SEC6P32844 805 aa3.87□□□□□ -1.79
SPT6YGR116W YKL050CP35736 922 aa3.87□□□□□ -1.79
SPT6YGR116W DBP7P36120 742 aaKnown RBP3.87□□□□□ -1.79
SPT6YGR116W CCT3P39077 534 aaKnown RBP3.87□□□□□ -1.79
SPT6YGR116W CSM2P40465 213 aa3.87□□□□□ -1.79
SPT6YGR116W CAB2P40506 365 aa3.87□□□□□ -1.79
SPT6YGR116W RPA14P50106 137 aa3.87□□□□□ -1.79
SPT6YGR116W ESF2P53743 316 aaKnown RBP3.87□□□□□ -1.79
SPT6YGR116W SQS1P53866 767 aaKnown RBP3.87□□□□□ -1.79
SPT6YGR116W CDC53Q12018 815 aaKnown RBP3.87□□□□□ -1.79
SPT6YGR116W MED1Q12321 566 aa3.87□□□□□ -1.79
SPT6YGR116W ENO1P00924 437 aaKnown RBP3.87□□□□□ -1.79
SPT6YGR116W NUC1P08466 329 aa3.87□□□□□ -1.79
SPT6YGR116W NGR1P32831 672 aaKnown RBP3.87□□□□□ -1.79
SPT6YGR116W MYO3P36006 1272 aa3.87□□□□□ -1.79
SPT6YGR116W IES5P40060 125 aa3.87□□□□□ -1.79
SPT6YGR116W LCP5P40079 357 aaPredicted RBP3.87□□□□□ -1.79
SPT6YGR116W EMP47P43555 445 aa3.87□□□□□ -1.79
SPT6YGR116W FRK1Q03002 865 aaPredicted RBP3.87□□□□□ -1.79
SPT6YGR116W INM2Q05533 292 aa3.87□□□□□ -1.79
SPT6YGR116W NFI1Q12216 726 aa3.87□□□□□ -1.79
SPT6YGR116W HAT1Q12341 374 aa3.87□□□□□ -1.79
SPT6YGR116W SBP1P10080 294 aaKnown RBP3.87□□□□□ -1.79
SPT6YGR116W PEP5P12868 1029 aa3.87□□□□□ -1.79
SPT6YGR116W SEC21P32074 935 aaKnown RBP3.87□□□□□ -1.79
SPT6YGR116W TRM2P33753 639 aa3.87□□□□□ -1.79
SPT6YGR116W YKL133CP36066 463 aa3.87□□□□□ -1.79
SPT6YGR116W PET10P36139 283 aa3.87□□□□□ -1.79
SPT6YGR116W TRZ1P36159 838 aaPredicted RBP3.87□□□□□ -1.79
SPT6YGR116W MMS21P38632 267 aa3.87□□□□□ -1.79
SPT6YGR116W HIS2P38635 335 aa3.87□□□□□ -1.79
SPT6YGR116W PCF11P39081 626 aaPredicted RBP3.87□□□□□ -1.79
SPT6YGR116W FRT2P39734 528 aa3.87□□□□□ -1.79
SPT6YGR116W TY4A-JP47023 414 aa3.87□□□□□ -1.79
SPT6YGR116W RIM8P53179 542 aa3.87□□□□□ -1.79
SPT6YGR116W CBK1P53894 756 aa3.87□□□□□ -1.79
SPT6YGR116W DIG1Q03063 452 aaKnown RBP3.87□□□□□ -1.79
SPT6YGR116W TSR2Q06672 205 aaKnown RBP3.87□□□□□ -1.79
SPT6YGR116W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SPT6YGR116W GET4Q12125 312 aa3.87□□□□□ -1.79
SPT6YGR116W BRR1Q99177 341 aaPredicted RBP3.87□□□□□ -1.79
SPT6YGR116W CHO2P05374 869 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W SNF1P06782 633 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W ILV2P07342 687 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W CLN3P13365 580 aa3.86□□□□□ -1.79
SPT6YGR116W PHO87P25360 923 aa3.86□□□□□ -1.79
SPT6YGR116W RPS5P26783 225 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W BRF1P29056 596 aa3.86□□□□□ -1.79
SPT6YGR116W SER1P33330 395 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W VHC1P38329 1120 aa3.86□□□□□ -1.79
SPT6YGR116W POP4P38336 279 aa3.86□□□□□ -1.79
SPT6YGR116W NMD5P46970 1048 aa3.86□□□□□ -1.79
SPT6YGR116W YGL108CP53139 140 aa3.86□□□□□ -1.79
SPT6YGR116W YGR016WP53209 190 aa3.86□□□□□ -1.79
SPT6YGR116W ADE12P80210 433 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W ACL4Q03771 387 aa3.86□□□□□ -1.79
SPT6YGR116W MGR3Q04472 501 aa3.86□□□□□ -1.79
SPT6YGR116W GSY1P23337 708 aa3.86□□□□□ -1.79
SPT6YGR116W PTC3P34221 468 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W PES4P39684 611 aa3.86□□□□□ -1.79
SPT6YGR116W LAM5P43560 674 aa3.86□□□□□ -1.79
SPT6YGR116W YFR006WP43590 535 aa3.86□□□□□ -1.79
SPT6YGR116W MIG2P53035 382 aa3.86□□□□□ -1.79
SPT6YGR116W MYO5Q04439 1219 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W NSE1Q07913 336 aa3.86□□□□□ -1.79
SPT6YGR116W GCN3P14741 305 aa3.86□□□□□ -1.79
SPT6YGR116W SPT16P32558 1035 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W HES1P35843 434 aa3.86□□□□□ -1.79
SPT6YGR116W SPC42P36094 363 aa3.86□□□□□ -1.79
SPT6YGR116W PPS1P38148 807 aa3.86□□□□□ -1.79
SPT6YGR116W RRT2P38332 387 aa3.86□□□□□ -1.79
SPT6YGR116W SPC97P38863 823 aa3.86□□□□□ -1.79
SPT6YGR116W YGL176CP46945 554 aa3.86□□□□□ -1.79
SPT6YGR116W RNR4P49723 345 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W MSN5P52918 1224 aa3.86□□□□□ -1.79
SPT6YGR116W PIP2P52960 996 aa3.86□□□□□ -1.79
SPT6YGR116W ADY3Q07732 790 aa3.86□□□□□ -1.79
SPT6YGR116W RAD61Q99359 647 aa3.86□□□□□ -1.79
SPT6YGR116W PGK1P00560 416 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W STI1P15705 589 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SPT6YGR116W EXO70P19658 623 aa3.86□□□□□ -1.79
SPT6YGR116W RAM2P29703 316 aa3.86□□□□□ -1.79
SPT6YGR116W DBF4P32325 704 aa3.86□□□□□ -1.79
SPT6YGR116W SAH1P39954 449 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W SUM1P46676 1062 aa3.86□□□□□ -1.79
SPT6YGR116W DAK1P54838 584 aaKnown RBP3.86□□□□□ -1.79
SPT6YGR116W STE6P12866 1290 aa3.85□□□□□ -1.79
SPT6YGR116W KAR4P25583 335 aa3.85□□□□□ -1.79
SPT6YGR116W RPL8BP29453 256 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms