RNA–Protein interactions for RNA: YFR021W

ATG18, Transcript of Phosphoinositide binding protein, yeast

Gene ATG18, Length 1,503 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG18	YFR021W	TPP1	Q03796	238 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	YPR196W	Q06595	470 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	PUS7	Q08647	676 aa	Known RBP	6.6	□□□□□ -1.35
ATG18	YFR021W	RTP1	Q12751	981 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	COQ4	O13525	335 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	MSM1	P22438	575 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	RPC82	P32349	654 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	NFU1	P32860	256 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	YKR051W	P36142	418 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	GPT2	P36148	743 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	MNT3	P40549	630 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	ERR3	P42222	437 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	RNR4	P49723	345 aa	Known RBP	6.6	□□□□□ -1.35
ATG18	YFR021W	TRS130	Q03660	1102 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	ERP4	Q12450	207 aa		6.6	□□□□□ -1.35
ATG18	YFR021W	RFA1	P22336	621 aa	Known RBP	6.59	□□□□□ -1.35
ATG18	YFR021W	FAT1	P38225	669 aa		6.59	□□□□□ -1.35
ATG18	YFR021W	PIK1	P39104	1066 aa		6.59	□□□□□ -1.35
ATG18	YFR021W	ALT1	P52893	592 aa		6.59	□□□□□ -1.35
ATG18	YFR021W	GTR1	Q00582	310 aa		6.59	□□□□□ -1.35
ATG18	YFR021W	VPS30	Q02948	557 aa		6.59	□□□□□ -1.35
ATG18	YFR021W	OPY2	Q06810	360 aa		6.59	□□□□□ -1.35
ATG18	YFR021W	RCL1	Q08096	367 aa	Predicted RBP	6.59	□□□□□ -1.35
ATG18	YFR021W	SEC65	P29478	273 aa		6.58	□□□□□ -1.36
ATG18	YFR021W	SET5	P38890	526 aa	Known RBP	6.58	□□□□□ -1.36
ATG18	YFR021W	SHR5	P41912	237 aa		6.58	□□□□□ -1.36
ATG18	YFR021W	BNA2	P47125	453 aa		6.58	□□□□□ -1.36
ATG18	YFR021W	CIA1	Q05583	330 aa		6.58	□□□□□ -1.36
ATG18	YFR021W	RPN7	Q06103	429 aa	Known RBP	6.58	□□□□□ -1.36
ATG18	YFR021W	DCS2	Q12123	353 aa		6.58	□□□□□ -1.36
ATG18	YFR021W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
ATG18	YFR021W	INH1	P01097	85 aa		6.57	□□□□□ -1.36
ATG18	YFR021W	ACE2	P21192	770 aa		6.57	□□□□□ -1.36
ATG18	YFR021W	PET309	P32522	965 aa	Predicted RBP	6.57	□□□□□ -1.36
ATG18	YFR021W	BEM3	P32873	1128 aa		6.57	□□□□□ -1.36
ATG18	YFR021W	JNM1	P36224	373 aa		6.57	□□□□□ -1.36
ATG18	YFR021W	HPF1	Q05164	967 aa		6.57	□□□□□ -1.36
ATG18	YFR021W	CRR1	Q05790	422 aa		6.57	□□□□□ -1.36
ATG18	YFR021W	HOP1	P20050	605 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	ATP12	P22135	325 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	CHS3	P29465	1165 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	CYS3	P31373	394 aa	Known RBP	6.56	□□□□□ -1.36
ATG18	YFR021W	YKR018C	P36114	725 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	SAP190	P36123	1033 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	MAL31	P38156	614 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	JJJ3	P47138	172 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	HDA1	P53973	706 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	HLR1	Q04429	423 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	YDR056C	Q12025	205 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	NHA1	Q99271	985 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	Q0142	Q9ZZW4	58 aa		6.56	□□□□□ -1.36
ATG18	YFR021W	SEC18	P18759	758 aa	Known RBP	6.55	□□□□□ -1.36
ATG18	YFR021W	MNN4	P36044	1178 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	CCZ1	P38273	704 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	YFL052W	P43551	465 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	ASK10	P48361	1146 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	HFM1	P51979	1187 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	HOL1	P53389	586 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	TEP1	P53916	434 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	OMS1	Q06668	471 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	HIM1	Q06674	414 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	YLR149C	Q99296	730 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	RPS9A	O13516	197 aa	Known RBP	6.55	□□□□□ -1.36
ATG18	YFR021W	NOT3	P06102	836 aa	Known RBP	6.55	□□□□□ -1.36
ATG18	YFR021W	NAM7	P30771	971 aa	Known RBP	6.55	□□□□□ -1.36
ATG18	YFR021W	NDE1	P40215	560 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	SRB7	P47822	140 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	BLS1	Q06071	122 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	THI21	Q08975	551 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	OSW2	Q12202	724 aa		6.55	□□□□□ -1.36
ATG18	YFR021W	SWI6	P09959	803 aa		6.54	□□□□□ -1.36
ATG18	YFR021W	RPS4A	P0CX35	261 aa	Known RBP	6.54	□□□□□ -1.36
ATG18	YFR021W	RPS4B	P0CX36	261 aa	Known RBP	6.54	□□□□□ -1.36
ATG18	YFR021W	MSH1	P25846	959 aa		6.54	□□□□□ -1.36
ATG18	YFR021W	IMP2'	P32351	346 aa		6.54	□□□□□ -1.36
ATG18	YFR021W	PSY4	P38193	441 aa		6.54	□□□□□ -1.36
ATG18	YFR021W	CEP3	P40969	608 aa		6.54	□□□□□ -1.36
ATG18	YFR021W	YGR035C	P53222	116 aa		6.54	□□□□□ -1.36
ATG18	YFR021W	MEP3	P53390	489 aa		6.54	□□□□□ -1.36
ATG18	YFR021W	MOT3	P54785	490 aa	Known RBP	6.54	□□□□□ -1.36
ATG18	YFR021W	SDH1	Q00711	640 aa		6.54	□□□□□ -1.36
ATG18	YFR021W	YOR059C	Q08448	450 aa	Known RBP	6.54	□□□□□ -1.36
ATG18	YFR021W	YPL277C	Q08989	487 aa		6.54	□□□□□ -1.36
ATG18	YFR021W	NUR1	Q12066	484 aa		6.54	□□□□□ -1.36
ATG18	YFR021W	TY1A-NL1	Q12391	440 aa	Known RBP	6.54	□□□□□ -1.36
ATG18	YFR021W	DPH6	Q12429	685 aa		6.54	□□□□□ -1.36
ATG18	YFR021W	SSM4	P40318	1319 aa		6.53	□□□□□ -1.36
ATG18	YFR021W	PRC1	P00729	532 aa		6.53	□□□□□ -1.36
ATG18	YFR021W	CDC31	P06704	161 aa	Known RBP	6.53	□□□□□ -1.36
ATG18	YFR021W	ECM21	P38167	1117 aa	Known RBP	6.53	□□□□□ -1.36
ATG18	YFR021W	TMA108	P40462	946 aa		6.53	□□□□□ -1.36
ATG18	YFR021W	YIL092W	P40497	633 aa		6.53	□□□□□ -1.36
ATG18	YFR021W	YJR039W	P47107	1121 aa		6.53	□□□□□ -1.36
ATG18	YFR021W	PCL10	P53124	433 aa		6.53	□□□□□ -1.36
ATG18	YFR021W	YKR011C	Q02209	353 aa		6.53	□□□□□ -1.36
ATG18	YFR021W	EAR1	Q03212	550 aa		6.53	□□□□□ -1.36
ATG18	YFR021W	YMR018W	Q04364	514 aa		6.53	□□□□□ -1.36
ATG18	YFR021W	TSR2	Q06672	205 aa	Known RBP	6.53	□□□□□ -1.36
ATG18	YFR021W	XYL2	Q07993	356 aa		6.53	□□□□□ -1.36
ATG18	YFR021W	YOR022C	Q12204	715 aa		6.53	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms