RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W STE13P33894 931 aa1.75□□□□□ -2.13
SMC1YFL008W MRP8P35719 219 aa1.75□□□□□ -2.13
SMC1YFL008W ATP25Q03153 612 aa1.75□□□□□ -2.13
SMC1YFL008W HAL9Q12180 1030 aa1.75□□□□□ -2.13
SMC1YFL008W CAT8P39113 1433 aa1.75□□□□□ -2.13
SMC1YFL008W TIM23P32897 222 aa1.75□□□□□ -2.13
SMC1YFL008W MSS4P38994 779 aa1.75□□□□□ -2.13
SMC1YFL008W ROT1Q03691 256 aa1.75□□□□□ -2.13
SMC1YFL008W LRS4Q04087 347 aaKnown RBP1.75□□□□□ -2.13
SMC1YFL008W YLR224WQ05947 369 aa1.75□□□□□ -2.13
SMC1YFL008W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
SMC1YFL008W YOL098CQ12496 1037 aa1.75□□□□□ -2.13
SMC1YFL008W MSS1P32559 526 aaPredicted RBP1.74□□□□□ -2.13
SMC1YFL008W YBR053CP38235 358 aa1.74□□□□□ -2.13
SMC1YFL008W FAL1Q12099 399 aaKnown RBP1.74□□□□□ -2.13
SMC1YFL008W NTO1Q12311 748 aa1.74□□□□□ -2.13
SMC1YFL008W SPE1P08432 466 aa1.74□□□□□ -2.13
SMC1YFL008W PCL2P25693 308 aa1.74□□□□□ -2.13
SMC1YFL008W TOD6P34219 525 aa1.74□□□□□ -2.13
SMC1YFL008W CTF13P35203 478 aa1.74□□□□□ -2.13
SMC1YFL008W HOS4P40480 1083 aa1.74□□□□□ -2.13
SMC1YFL008W BAP3P41815 604 aa1.74□□□□□ -2.13
SMC1YFL008W YGR012WP53206 393 aa1.74□□□□□ -2.13
SMC1YFL008W CWC24P53769 259 aa1.74□□□□□ -2.13
SMC1YFL008W GSF2Q04697 403 aaKnown RBP1.74□□□□□ -2.13
SMC1YFL008W CLN2P20438 545 aa1.73□□□□□ -2.13
SMC1YFL008W STE11P23561 717 aa1.73□□□□□ -2.13
SMC1YFL008W MCM7P38132 845 aa1.73□□□□□ -2.13
SMC1YFL008W PLB1P39105 664 aa1.73□□□□□ -2.13
SMC1YFL008W SDP1P40479 209 aa1.73□□□□□ -2.13
SMC1YFL008W LCD1Q04377 747 aa1.73□□□□□ -2.13
SMC1YFL008W ACK1Q07622 623 aaPredicted RBP1.73□□□□□ -2.13
SMC1YFL008W SUT2Q12286 268 aa1.73□□□□□ -2.13
SMC1YFL008W SKI3P17883 1432 aaKnown RBP1.73□□□□□ -2.13
SMC1YFL008W MMS1Q06211 1407 aa1.73□□□□□ -2.13
SMC1YFL008W CCZ1P38273 704 aa1.73□□□□□ -2.13
SMC1YFL008W GDH3P39708 457 aa1.73□□□□□ -2.13
SMC1YFL008W SNO2P53823 222 aa1.73□□□□□ -2.13
SMC1YFL008W CIT1P00890 479 aa1.73□□□□□ -2.13
SMC1YFL008W CMP2P14747 604 aa1.73□□□□□ -2.13
SMC1YFL008W RAD27P26793 382 aa1.73□□□□□ -2.13
SMC1YFL008W CDC11P32458 415 aa1.73□□□□□ -2.13
SMC1YFL008W YBR284WP38150 797 aa1.73□□□□□ -2.13
SMC1YFL008W ATG14P38270 344 aa1.73□□□□□ -2.13
SMC1YFL008W HSE1P38753 452 aa1.73□□□□□ -2.13
SMC1YFL008W GIP4P39732 760 aa1.73□□□□□ -2.13
SMC1YFL008W YJL049WP47048 450 aa1.73□□□□□ -2.13
SMC1YFL008W DUS3Q06053 668 aaKnown RBP1.73□□□□□ -2.13
SMC1YFL008W TDA5Q06417 326 aaKnown RBP1.73□□□□□ -2.13
SMC1YFL008W YLR040CQ07988 224 aa1.73□□□□□ -2.13
SMC1YFL008W GPB1Q08886 897 aa1.73□□□□□ -2.13
SMC1YFL008W YTA7P40340 1379 aa1.73□□□□□ -2.13
SMC1YFL008W IME1P21190 360 aa1.72□□□□□ -2.13
SMC1YFL008W HKR1P41809 1802 aa1.72□□□□□ -2.13
SMC1YFL008W YPT1P01123 206 aaKnown RBP1.72□□□□□ -2.13
SMC1YFL008W TRP4P07285 380 aaPredicted RBP1.72□□□□□ -2.13
SMC1YFL008W MGS1P40151 587 aa1.72□□□□□ -2.13
SMC1YFL008W SUN4P53616 420 aa1.72□□□□□ -2.13
SMC1YFL008W GUP2Q08929 609 aa1.72□□□□□ -2.13
SMC1YFL008W YPR071WQ12346 211 aa1.72□□□□□ -2.13
SMC1YFL008W NPC2Q12408 173 aa1.72□□□□□ -2.13
SMC1YFL008W COQ4O13525 335 aa1.72□□□□□ -2.13
SMC1YFL008W ERG6P25087 383 aaKnown RBP1.72□□□□□ -2.13
SMC1YFL008W CDC48P25694 835 aaKnown RBP1.72□□□□□ -2.13
SMC1YFL008W LYS9P38999 446 aa1.72□□□□□ -2.13
SMC1YFL008W YKR011CQ02209 353 aa1.72□□□□□ -2.13
SMC1YFL008W DCS2Q12123 353 aa1.72□□□□□ -2.13
SMC1YFL008W YSP2Q06681 1438 aa1.72□□□□□ -2.13
SMC1YFL008W CDC9P04819 755 aa1.71□□□□□ -2.14
SMC1YFL008W SRP101P32916 621 aa1.71□□□□□ -2.14
SMC1YFL008W EMC3P36039 253 aa1.71□□□□□ -2.14
SMC1YFL008W SHM2P37291 469 aaKnown RBP1.71□□□□□ -2.14
SMC1YFL008W ENP1P38333 483 aaKnown RBP1.71□□□□□ -2.14
SMC1YFL008W YER158CP40095 573 aa1.71□□□□□ -2.14
SMC1YFL008W CAF16P43569 289 aa1.71□□□□□ -2.14
SMC1YFL008W ENV11P53246 860 aa1.71□□□□□ -2.14
SMC1YFL008W YLR149CQ99296 730 aa1.71□□□□□ -2.14
SMC1YFL008W PRP43P53131 767 aaKnown RBP1.71□□□□□ -2.14
SMC1YFL008W ASI2P53895 289 aa1.71□□□□□ -2.14
SMC1YFL008W NAN1Q02931 896 aaKnown RBP1.71□□□□□ -2.14
SMC1YFL008W MUS81Q04149 632 aaPredicted RBP1.71□□□□□ -2.14
SMC1YFL008W ENB1Q08299 606 aa1.71□□□□□ -2.14
SMC1YFL008W PUS9Q12069 462 aa1.71□□□□□ -2.14
SMC1YFL008W MSH2P25847 964 aa1.71□□□□□ -2.14
SMC1YFL008W CCR4P31384 837 aaKnown RBP1.71□□□□□ -2.14
SMC1YFL008W RPC82P32349 654 aa1.71□□□□□ -2.14
SMC1YFL008W REC104P33323 182 aa1.71□□□□□ -2.14
SMC1YFL008W ALR2P43553 858 aa1.71□□□□□ -2.14
SMC1YFL008W RCR2Q03446 210 aaKnown RBP1.71□□□□□ -2.14
SMC1YFL008W EAF1Q06337 982 aa1.71□□□□□ -2.14
SMC1YFL008W URA1P28272 314 aaPredicted RBP1.7□□□□□ -2.14
SMC1YFL008W PCM1P38628 557 aaKnown RBP1.7□□□□□ -2.14
SMC1YFL008W HXT6P39003 570 aaKnown RBP1.7□□□□□ -2.14
SMC1YFL008W HXT7P39004 570 aa1.7□□□□□ -2.14
SMC1YFL008W SPO20Q04359 397 aa1.7□□□□□ -2.14
SMC1YFL008W GAD1Q04792 585 aa1.7□□□□□ -2.14
SMC1YFL008W NOT3P06102 836 aaKnown RBP1.7□□□□□ -2.14
SMC1YFL008W SIR3P06701 978 aa1.7□□□□□ -2.14
SMC1YFL008W STI1P15705 589 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
SMC1YFL008W MTC7P32633 139 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms