RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C URB2P47108 1174 aa11.3□□□□□ -0.6
CCA1YER168C YNL035CP53962 389 aaKnown RBP11.3□□□□□ -0.6
CCA1YER168C DUS4Q06063 367 aa11.3□□□□□ -0.6
CCA1YER168C PRP16P15938 1071 aaPredicted RBP11.29□□□□□ -0.6
CCA1YER168C RRN6P32786 894 aa11.29□□□□□ -0.6
CCA1YER168C ATG19P35193 415 aa11.29□□□□□ -0.6
CCA1YER168C END3P39013 349 aa11.29□□□□□ -0.6
CCA1YER168C YTA12P40341 825 aa11.29□□□□□ -0.6
CCA1YER168C YJL007CP47080 104 aa11.29□□□□□ -0.6
CCA1YER168C FRA1Q07825 749 aa11.29□□□□□ -0.6
CCA1YER168C AIM7Q12156 149 aa11.29□□□□□ -0.6
CCA1YER168C ADH4P10127 382 aa11.28□□□□□ -0.6
CCA1YER168C KAR3P17119 729 aa11.28□□□□□ -0.6
CCA1YER168C SSD1P24276 1250 aaKnown RBP RIP-Chip data11.28□□□□□ -0.6not detected
CCA1YER168C ILV6P25605 309 aaKnown RBP11.28□□□□□ -0.6
CCA1YER168C TFC4P33339 1025 aa11.28□□□□□ -0.6
CCA1YER168C MRX1P40050 688 aa11.28□□□□□ -0.6
CCA1YER168C FPK1P53739 893 aa11.28□□□□□ -0.6
CCA1YER168C SQS1P53866 767 aaKnown RBP11.28□□□□□ -0.6
CCA1YER168C YDR222WQ04925 415 aa11.28□□□□□ -0.6
CCA1YER168C TY1B-AO13527 1196 aaKnown RBP11.27□□□□□ -0.6
CCA1YER168C DAL2P25335 343 aa11.27□□□□□ -0.6
CCA1YER168C CDC10P25342 322 aaKnown RBP11.27□□□□□ -0.6
CCA1YER168C YCR051WP25631 222 aa11.27□□□□□ -0.6
CCA1YER168C CDC48P25694 835 aaKnown RBP11.27□□□□□ -0.6
CCA1YER168C EUG1P32474 517 aa11.27□□□□□ -0.6
CCA1YER168C YME1P32795 747 aa11.27□□□□□ -0.6
CCA1YER168C PBP2P38151 413 aaKnown RBP RIP-Chip data11.27□□□□□ -0.6not detected
CCA1YER168C HUL5P53119 910 aa11.27□□□□□ -0.6
CCA1YER168C YGR111WP53265 400 aa11.27□□□□□ -0.6
CCA1YER168C CPR6P53691 371 aaKnown RBP11.27□□□□□ -0.6
CCA1YER168C YDR338CQ05497 695 aa11.27□□□□□ -0.6
CCA1YER168C ISA1Q07821 250 aaPredicted RBP11.27□□□□□ -0.6
CCA1YER168C NOC3Q07896 663 aaPredicted RBP11.27□□□□□ -0.6
CCA1YER168C HIF1Q12373 385 aa11.27□□□□□ -0.6
CCA1YER168C SEY1Q99287 776 aa11.27□□□□□ -0.6
CCA1YER168C PER1P25625 357 aa11.27□□□□□ -0.61
CCA1YER168C DBF4P32325 704 aa11.27□□□□□ -0.61
CCA1YER168C COT1P32798 439 aa11.27□□□□□ -0.61
CCA1YER168C VPS35P34110 944 aa11.27□□□□□ -0.61
CCA1YER168C PIN4P34217 668 aaKnown RBP RIP-Chip data11.27□□□□□ -0.61not detected
CCA1YER168C SLI15P38283 698 aa11.27□□□□□ -0.61
CCA1YER168C ROD1Q02805 837 aa11.27□□□□□ -0.61
CCA1YER168C ATG16Q03818 150 aa11.27□□□□□ -0.61
CCA1YER168C SVF1Q05515 481 aa11.27□□□□□ -0.61
CCA1YER168C ACM1Q08981 209 aa11.27□□□□□ -0.61
CCA1YER168C RPB2P08518 1224 aaKnown RBP11.26□□□□□ -0.61
CCA1YER168C PEP5P12868 1029 aa11.26□□□□□ -0.61
CCA1YER168C VMA1P17255 1071 aaKnown RBP11.26□□□□□ -0.61
CCA1YER168C PUF4P25339 888 aaKnown RBP RIP-Chip data11.26□□□□□ -0.61not detected
CCA1YER168C GPI10P30777 616 aa11.26□□□□□ -0.61
CCA1YER168C UTR4P32626 227 aa11.26□□□□□ -0.61
CCA1YER168C YBL055CP34220 418 aaPredicted RBP11.26□□□□□ -0.61
CCA1YER168C MSG5P38590 489 aa11.26□□□□□ -0.61
CCA1YER168C INA22P40576 216 aa11.26□□□□□ -0.61
CCA1YER168C CPR7P47103 393 aa11.26□□□□□ -0.61
CCA1YER168C HSH155P49955 971 aaKnown RBP11.26□□□□□ -0.61
CCA1YER168C RPL22BP56628 122 aaKnown RBP11.26□□□□□ -0.61
CCA1YER168C YLR278CQ05854 1341 aa11.26□□□□□ -0.61
CCA1YER168C POL3P15436 1097 aa11.25□□□□□ -0.61
CCA1YER168C YDJ1P25491 409 aaKnown RBP11.25□□□□□ -0.61
CCA1YER168C LOS1P33418 1100 aaPredicted RBP11.25□□□□□ -0.61
CCA1YER168C OCT1P35999 772 aa11.25□□□□□ -0.61
CCA1YER168C MRX3P38172 270 aa11.25□□□□□ -0.61
CCA1YER168C NPP2P39997 493 aa11.25□□□□□ -0.61
CCA1YER168C ASG1P40467 964 aa11.25□□□□□ -0.61
CCA1YER168C DSN1P40568 576 aa11.25□□□□□ -0.61
CCA1YER168C PPM1Q04081 328 aa11.25□□□□□ -0.61
CCA1YER168C TAF9Q05027 157 aa11.25□□□□□ -0.61
CCA1YER168C PUF3Q07807 879 aaKnown RBP RIP-Chip data11.25□□□□□ -0.61not detected
CCA1YER168C CSG2P35206 410 aa11.24□□□□□ -0.61
CCA1YER168C VPS53P47061 822 aa11.24□□□□□ -0.61
CCA1YER168C ATG1P53104 897 aa11.24□□□□□ -0.61
CCA1YER168C RTT102P53330 157 aa11.24□□□□□ -0.61
CCA1YER168C PEX29Q03370 554 aa11.24□□□□□ -0.61
CCA1YER168C RGA2Q06407 1009 aa11.24□□□□□ -0.61
CCA1YER168C MPC54Q08550 464 aa11.24□□□□□ -0.61
CCA1YER168C NCA2Q12374 616 aa11.24□□□□□ -0.61
CCA1YER168C DED1P06634 604 aaKnown RBP11.24□□□□□ -0.61
CCA1YER168C CDC42P19073 191 aa11.24□□□□□ -0.61
CCA1YER168C IME1P21190 360 aa11.24□□□□□ -0.61
CCA1YER168C CBF2P32504 956 aa11.24□□□□□ -0.61
CCA1YER168C VHC1P38329 1120 aa11.24□□□□□ -0.61
CCA1YER168C PHO86P46956 311 aa11.24□□□□□ -0.61
CCA1YER168C UBP15P50101 1230 aa11.24□□□□□ -0.61
CCA1YER168C TBF1Q02457 562 aa11.24□□□□□ -0.61
CCA1YER168C SMC5Q08204 1093 aa11.24□□□□□ -0.61
CCA1YER168C RNR1P21524 888 aaKnown RBP11.23□□□□□ -0.61
CCA1YER168C SWI3P32591 825 aa11.23□□□□□ -0.61
CCA1YER168C RPA49Q01080 415 aaPredicted RBP11.23□□□□□ -0.61
CCA1YER168C ADA2Q02336 434 aa11.23□□□□□ -0.61
CCA1YER168C CEF1Q03654 590 aaPredicted RBP11.23□□□□□ -0.61
CCA1YER168C UFO1Q04511 668 aa11.23□□□□□ -0.61
CCA1YER168C IWR1Q07532 353 aaPredicted RBP11.23□□□□□ -0.61
CCA1YER168C IES4Q08561 116 aa11.23□□□□□ -0.61
CCA1YER168C JIP3O13555 125 aa11.22□□□□□ -0.61
CCA1YER168C RPS3P05750 240 aaKnown RBP11.22□□□□□ -0.61
CCA1YER168C PMR1P13586 950 aa11.22□□□□□ -0.61
CCA1YER168C SPO16P17122 198 aa11.22□□□□□ -0.61
CCA1YER168C SQT1P35184 431 aa11.22□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 149.4 ms