RNA–Protein interactions for RNA: YER128W

VFA1, Transcript of Protein that interacts with Vps4p and has a role in vacuolar sorting, yeastyeast

Gene VFA1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VFA1YER128W COG8Q04632 607 aa3.92□□□□□ -1.78
VFA1YER128W ERV41Q04651 352 aa3.92□□□□□ -1.78
VFA1YER128W SSL1Q04673 461 aaPredicted RBP3.92□□□□□ -1.78
VFA1YER128W PSK2Q08217 1101 aa3.92□□□□□ -1.78
VFA1YER128W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
VFA1YER128W GLE1Q12315 538 aa3.92□□□□□ -1.78
VFA1YER128W VPS5Q92331 675 aa3.92□□□□□ -1.78
VFA1YER128W RPL5P26321 297 aaKnown RBP3.91□□□□□ -1.78
VFA1YER128W CTF13P35203 478 aa3.91□□□□□ -1.78
VFA1YER128W YJR008WP47085 338 aa3.91□□□□□ -1.78
VFA1YER128W YGR053CP53234 283 aa3.91□□□□□ -1.78
VFA1YER128W YOR389WQ08912 624 aa3.91□□□□□ -1.78
VFA1YER128W CLF1Q12309 687 aaPredicted RBP3.91□□□□□ -1.78
VFA1YER128W TRM11Q12463 433 aa3.91□□□□□ -1.78
VFA1YER128W GFA1P14742 717 aaKnown RBP3.9□□□□□ -1.79
VFA1YER128W SWI3P32591 825 aa3.9□□□□□ -1.79
VFA1YER128W PPZ2P33329 710 aa3.9□□□□□ -1.79
VFA1YER128W STE13P33894 931 aa3.9□□□□□ -1.79
VFA1YER128W OPY1P38271 328 aa3.9□□□□□ -1.79
VFA1YER128W SDP1P40479 209 aa3.9□□□□□ -1.79
VFA1YER128W GDE1Q02979 1223 aa3.9□□□□□ -1.79
VFA1YER128W LSP1Q12230 341 aaKnown RBP3.9□□□□□ -1.79
VFA1YER128W SWM1Q12379 170 aa3.9□□□□□ -1.79
VFA1YER128W SPA2P23201 1466 aaKnown RBP3.9□□□□□ -1.79
VFA1YER128W CAF20P12962 161 aaKnown RBP3.89□□□□□ -1.79
VFA1YER128W SBA1P28707 216 aaKnown RBP3.89□□□□□ -1.79
VFA1YER128W HEM3P28789 327 aa3.89□□□□□ -1.79
VFA1YER128W PPH3P32345 308 aa3.89□□□□□ -1.79
VFA1YER128W HUL5P53119 910 aa3.89□□□□□ -1.79
VFA1YER128W YNL247WP53852 767 aaKnown RBP3.89□□□□□ -1.79
VFA1YER128W ADY4Q05955 493 aa3.89□□□□□ -1.79
VFA1YER128W NFI1Q12216 726 aa3.89□□□□□ -1.79
VFA1YER128W BNR1P40450 1375 aa3.89□□□□□ -1.79
VFA1YER128W FBP1P09201 348 aa3.88□□□□□ -1.79
VFA1YER128W KAR3P17119 729 aa3.88□□□□□ -1.79
VFA1YER128W GAL11P19659 1081 aa3.88□□□□□ -1.79
VFA1YER128W CLN1P20437 546 aa3.88□□□□□ -1.79
VFA1YER128W EFB1P32471 206 aaKnown RBP3.88□□□□□ -1.79
VFA1YER128W MFT1P33441 392 aaKnown RBP3.88□□□□□ -1.79
VFA1YER128W TDP1P38319 544 aa3.88□□□□□ -1.79
VFA1YER128W YBR238CP38330 731 aaKnown RBP3.88□□□□□ -1.79
VFA1YER128W CHZ1P40019 153 aaPredicted RBP3.88□□□□□ -1.79
VFA1YER128W YIL108WP40483 696 aaKnown RBP3.88□□□□□ -1.79
VFA1YER128W GUS1P46655 708 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
VFA1YER128W FAA4P47912 694 aaKnown RBP3.88□□□□□ -1.79
VFA1YER128W YKE2P52553 114 aa3.88□□□□□ -1.79
VFA1YER128W HOS2P53096 452 aaPredicted RBP3.88□□□□□ -1.79
VFA1YER128W PAP2P53632 584 aaKnown RBP3.88□□□□□ -1.79
VFA1YER128W RIA1P53893 1110 aa3.88□□□□□ -1.79
VFA1YER128W RRB1Q04225 511 aaKnown RBP3.88□□□□□ -1.79
VFA1YER128W YDR306CQ06640 478 aa3.88□□□□□ -1.79
VFA1YER128W AFT2Q08957 416 aa3.88□□□□□ -1.79
VFA1YER128W SUT2Q12286 268 aa3.88□□□□□ -1.79
VFA1YER128W HCA4P20448 770 aaKnown RBP3.87□□□□□ -1.79
VFA1YER128W AGP1P25376 633 aa3.87□□□□□ -1.79
VFA1YER128W RPD3P32561 433 aa3.87□□□□□ -1.79
VFA1YER128W BLI1P35727 113 aa3.87□□□□□ -1.79
VFA1YER128W CCM1P48237 864 aaPredicted RBP3.87□□□□□ -1.79
VFA1YER128W IMO32P53219 342 aa3.87□□□□□ -1.79
VFA1YER128W JJJ1P53863 590 aa3.87□□□□□ -1.79
VFA1YER128W BNI5P53890 448 aaKnown RBP3.87□□□□□ -1.79
VFA1YER128W HOF1Q05080 669 aa3.87□□□□□ -1.79
VFA1YER128W NDL1Q06568 189 aa3.87□□□□□ -1.79
VFA1YER128W ARR1Q06596 294 aa3.87□□□□□ -1.79
VFA1YER128W FAL1Q12099 399 aaKnown RBP3.87□□□□□ -1.79
VFA1YER128W HSP42Q12329 375 aa3.87□□□□□ -1.79
VFA1YER128W SAC3P46674 1301 aa3.87□□□□□ -1.79
VFA1YER128W TUB1P09733 447 aaKnown RBP3.86□□□□□ -1.79
VFA1YER128W TUB3P09734 445 aaKnown RBP3.86□□□□□ -1.79
VFA1YER128W SWI6P09959 803 aa3.86□□□□□ -1.79
VFA1YER128W THR4P16120 514 aaKnown RBP3.86□□□□□ -1.79
VFA1YER128W MDM10P18409 493 aa3.86□□□□□ -1.79
VFA1YER128W CDC43P18898 376 aa3.86□□□□□ -1.79
VFA1YER128W NPP1P25353 742 aa3.86□□□□□ -1.79
VFA1YER128W PSO2P30620 661 aa3.86□□□□□ -1.79
VFA1YER128W ZUO1P32527 433 aaKnown RBP3.86□□□□□ -1.79
VFA1YER128W FKH2P41813 862 aa3.86□□□□□ -1.79
VFA1YER128W HEL2Q05580 639 aaKnown RBP3.86□□□□□ -1.79
VFA1YER128W CRR1Q05790 422 aa3.86□□□□□ -1.79
VFA1YER128W COQ11Q05892 277 aa3.86□□□□□ -1.79
VFA1YER128W YPR172WQ06608 200 aa3.86□□□□□ -1.79
VFA1YER128W ADE8P04161 214 aa3.85□□□□□ -1.79
VFA1YER128W RFA1P22336 621 aaKnown RBP3.85□□□□□ -1.79
VFA1YER128W PRS1P32895 427 aaKnown RBP3.85□□□□□ -1.79
VFA1YER128W RPC37P36121 282 aa3.85□□□□□ -1.79
VFA1YER128W RPP1P38786 293 aa3.85□□□□□ -1.79
VFA1YER128W CTF8P38877 133 aa3.85□□□□□ -1.79
VFA1YER128W VPS27P40343 622 aaKnown RBP3.85□□□□□ -1.79
VFA1YER128W MUP1P50276 574 aa3.85□□□□□ -1.79
VFA1YER128W VPS73P53142 486 aaKnown RBP3.85□□□□□ -1.79
VFA1YER128W VTC3Q02725 835 aa3.85□□□□□ -1.79
VFA1YER128W RUD3Q12234 484 aaKnown RBP3.85□□□□□ -1.79
VFA1YER128W YNL162W-AQ3E7A8 72 aa3.85□□□□□ -1.79
VFA1YER128W MSM1P22438 575 aa3.84□□□□□ -1.79
VFA1YER128W BRF1P29056 596 aa3.84□□□□□ -1.79
VFA1YER128W TYE7P33122 291 aaPredicted RBP3.84□□□□□ -1.79
VFA1YER128W MPE1P35728 441 aaKnown RBP3.84□□□□□ -1.79
VFA1YER128W MED8P38304 223 aa3.84□□□□□ -1.79
VFA1YER128W PCL5P38794 229 aa3.84□□□□□ -1.79
VFA1YER128W NOC2P39744 710 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms