RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C ASK10P48361 1146 aa6.54□□□□□ -1.36
VPS72YDR485C HRQ1Q05549 1077 aa6.54□□□□□ -1.36
VPS72YDR485C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
VPS72YDR485C ENT1Q12518 454 aa6.54□□□□□ -1.36
VPS72YDR485C PGA3Q12746 312 aaKnown RBP6.54□□□□□ -1.36
VPS72YDR485C NCP1P16603 691 aaKnown RBP6.54□□□□□ -1.36
VPS72YDR485C BRF1P29056 596 aa6.54□□□□□ -1.36
VPS72YDR485C PGM2P37012 569 aaKnown RBP6.54□□□□□ -1.36
VPS72YDR485C LRP1P38801 184 aaKnown RBP6.54□□□□□ -1.36
VPS72YDR485C HOS2P53096 452 aaPredicted RBP6.54□□□□□ -1.36
VPS72YDR485C RRT6P53117 311 aaPredicted RBP6.54□□□□□ -1.36
VPS72YDR485C GRX3Q03835 250 aa6.54□□□□□ -1.36
VPS72YDR485C YHM2Q04013 314 aa6.54□□□□□ -1.36
VPS72YDR485C YLR287CQ05881 355 aa6.54□□□□□ -1.36
VPS72YDR485C RRG1Q12167 365 aaPredicted RBP6.54□□□□□ -1.36
VPS72YDR485C DPH2P32461 534 aa6.53□□□□□ -1.36
VPS72YDR485C TSL1P38427 1098 aaKnown RBP6.53□□□□□ -1.36
VPS72YDR485C SPO74P45819 413 aa6.53□□□□□ -1.36
VPS72YDR485C PUS4P48567 403 aaKnown RBP6.53□□□□□ -1.36
VPS72YDR485C SRP1Q02821 542 aaKnown RBP6.53□□□□□ -1.36
VPS72YDR485C CCZ1P38273 704 aa6.53□□□□□ -1.36
VPS72YDR485C LAM1P38851 1228 aa6.53□□□□□ -1.36
VPS72YDR485C SBE2P42223 864 aaKnown RBP6.53□□□□□ -1.36
VPS72YDR485C CPR6P53691 371 aaKnown RBP6.53□□□□□ -1.36
VPS72YDR485C TRM8Q12009 286 aa6.53□□□□□ -1.36
VPS72YDR485C GUK1P15454 187 aaKnown RBP6.52□□□□□ -1.37
VPS72YDR485C YEL068CP39977 110 aa6.52□□□□□ -1.37
VPS72YDR485C EAF5P39995 279 aa6.52□□□□□ -1.37
VPS72YDR485C NPP2P39997 493 aa6.52□□□□□ -1.37
VPS72YDR485C RAD26P40352 1085 aa6.52□□□□□ -1.37
VPS72YDR485C AAD14P42884 376 aa6.52□□□□□ -1.37
VPS72YDR485C MRPL19P53875 158 aa6.52□□□□□ -1.37
VPS72YDR485C HCA4P20448 770 aaKnown RBP6.52□□□□□ -1.37
VPS72YDR485C CMK1P27466 446 aaKnown RBP6.52□□□□□ -1.37
VPS72YDR485C FET4P40988 552 aa6.52□□□□□ -1.37
VPS72YDR485C RMD8P43620 662 aa6.52□□□□□ -1.37
VPS72YDR485C HAS1Q03532 505 aaKnown RBP6.52□□□□□ -1.37
VPS72YDR485C GSF2Q04697 403 aaKnown RBP6.52□□□□□ -1.37
VPS72YDR485C SOG2Q08817 791 aa6.52□□□□□ -1.37
VPS72YDR485C PGC1Q08959 321 aa6.52□□□□□ -1.37
VPS72YDR485C NUR1Q12066 484 aa6.52□□□□□ -1.37
VPS72YDR485C ARP7Q12406 477 aa6.52□□□□□ -1.37
VPS72YDR485C MTF2P10849 440 aa6.51□□□□□ -1.37
VPS72YDR485C AAD3P25612 363 aa6.51□□□□□ -1.37
VPS72YDR485C SEG2P34250 1132 aa6.51□□□□□ -1.37
VPS72YDR485C YDR514CQ04408 483 aa6.51□□□□□ -1.37
VPS72YDR485C UTP21Q06078 939 aaPredicted RBP6.51□□□□□ -1.37
VPS72YDR485C RVB2Q12464 471 aaKnown RBP6.51□□□□□ -1.37
VPS72YDR485C RPC53P25441 422 aa6.51□□□□□ -1.37
VPS72YDR485C YIL092WP40497 633 aa6.51□□□□□ -1.37
VPS72YDR485C CCM1P48237 864 aaPredicted RBP6.51□□□□□ -1.37
VPS72YDR485C YML6P51998 286 aa6.51□□□□□ -1.37
VPS72YDR485C ARE2P53629 642 aaKnown RBP6.51□□□□□ -1.37
VPS72YDR485C YPL191CQ08930 360 aa6.51□□□□□ -1.37
VPS72YDR485C MET32Q12041 191 aa6.51□□□□□ -1.37
VPS72YDR485C DCS2Q12123 353 aa6.51□□□□□ -1.37
VPS72YDR485C CDC4P07834 779 aa6.5□□□□□ -1.37
VPS72YDR485C SLA2P33338 968 aa6.5□□□□□ -1.37
VPS72YDR485C YHR202WP38887 602 aa6.5□□□□□ -1.37
VPS72YDR485C CCT3P39077 534 aaKnown RBP6.5□□□□□ -1.37
VPS72YDR485C SMK1P41808 388 aa6.5□□□□□ -1.37
VPS72YDR485C MAD3P47074 515 aa6.5□□□□□ -1.37
VPS72YDR485C VTC4P47075 721 aa6.5□□□□□ -1.37
VPS72YDR485C SSL2Q00578 843 aa6.5□□□□□ -1.37
VPS72YDR485C PTA1Q01329 785 aaPredicted RBP6.5□□□□□ -1.37
VPS72YDR485C VID22Q05934 901 aa6.5□□□□□ -1.37
VPS72YDR485C TAH18Q12181 623 aa6.5□□□□□ -1.37
VPS72YDR485C ILS1P09436 1072 aaKnown RBP6.5□□□□□ -1.37
VPS72YDR485C ADP1P25371 1049 aa6.5□□□□□ -1.37
VPS72YDR485C YCL049CP25577 312 aa6.5□□□□□ -1.37
VPS72YDR485C FUN30P31380 1131 aa6.5□□□□□ -1.37
VPS72YDR485C LSM5P40089 93 aaKnown RBP6.5□□□□□ -1.37
VPS72YDR485C VPS53P47061 822 aa6.5□□□□□ -1.37
VPS72YDR485C YKE2P52553 114 aa6.5□□□□□ -1.37
VPS72YDR485C FUR1P18562 216 aaKnown RBP6.49□□□□□ -1.37
VPS72YDR485C YCL002CP25565 263 aa6.49□□□□□ -1.37
VPS72YDR485C NPL6P32832 435 aa6.49□□□□□ -1.37
VPS72YDR485C XRS2P33301 854 aa6.49□□□□□ -1.37
VPS72YDR485C PXA2P34230 853 aa6.49□□□□□ -1.37
VPS72YDR485C ARL1P38116 183 aaKnown RBP6.49□□□□□ -1.37
VPS72YDR485C APM3P38153 483 aa6.49□□□□□ -1.37
VPS72YDR485C PUG1P40100 303 aa6.49□□□□□ -1.37
VPS72YDR485C HOS3Q02959 697 aaKnown RBP6.49□□□□□ -1.37
VPS72YDR485C PKH1Q03407 766 aa6.49□□□□□ -1.37
VPS72YDR485C SYF1Q04048 859 aaPredicted RBP6.49□□□□□ -1.37
VPS72YDR485C RSC2Q06488 889 aa6.49□□□□□ -1.37
VPS72YDR485C CDC26P14724 124 aa6.49□□□□□ -1.37
VPS72YDR485C PGS1P25578 521 aa6.49□□□□□ -1.37
VPS72YDR485C SEC65P29478 273 aa6.49□□□□□ -1.37
VPS72YDR485C YKR051WP36142 418 aa6.49□□□□□ -1.37
VPS72YDR485C HSL7P38274 827 aa6.49□□□□□ -1.37
VPS72YDR485C BNA2P47125 453 aa6.49□□□□□ -1.37
VPS72YDR485C BTN2P53286 410 aa6.49□□□□□ -1.37
VPS72YDR485C LRS4Q04087 347 aaKnown RBP6.49□□□□□ -1.37
VPS72YDR485C VHS3Q08438 674 aa6.49□□□□□ -1.37
VPS72YDR485C YBR182C-AQ8TGU6 64 aa6.49□□□□□ -1.37
VPS72YDR485C SEM1O94742 89 aa6.48□□□□□ -1.37
VPS72YDR485C PHO3P24031 467 aa6.48□□□□□ -1.37
VPS72YDR485C STE13P33894 931 aa6.48□□□□□ -1.37
VPS72YDR485C SAS3P34218 831 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms