RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W MRH1Q12117 320 aaPredicted RBP5.17□□□□□ -1.58
RPN9YDR427W GFA1P14742 717 aaKnown RBP5.16□□□□□ -1.58
RPN9YDR427W EMC3P36039 253 aa5.16□□□□□ -1.58
RPN9YDR427W GDH3P39708 457 aa5.16□□□□□ -1.58
RPN9YDR427W MAL11P53048 616 aa5.16□□□□□ -1.58
RPN9YDR427W DLT1Q04216 342 aa5.16□□□□□ -1.58
RPN9YDR427W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
RPN9YDR427W MPH2P0CD99 609 aa5.15□□□□□ -1.59
RPN9YDR427W PPS1P38148 807 aa5.15□□□□□ -1.59
RPN9YDR427W GYP8P43570 497 aa5.15□□□□□ -1.59
RPN9YDR427W OSW7P43611 510 aa5.15□□□□□ -1.59
RPN9YDR427W ALG2P43636 503 aa5.15□□□□□ -1.59
RPN9YDR427W RFA1P22336 621 aaKnown RBP5.14□□□□□ -1.59
RPN9YDR427W RPD3P32561 433 aa5.14□□□□□ -1.59
RPN9YDR427W DAM1P53267 343 aa5.14□□□□□ -1.59
RPN9YDR427W VPS30Q02948 557 aa5.14□□□□□ -1.59
RPN9YDR427W HOF1Q05080 669 aa5.14□□□□□ -1.59
RPN9YDR427W AFT2Q08957 416 aa5.14□□□□□ -1.59
RPN9YDR427W YLR125WQ12138 136 aa5.14□□□□□ -1.59
RPN9YDR427W URA1P28272 314 aaPredicted RBP5.13□□□□□ -1.59
RPN9YDR427W SEC21P32074 935 aaKnown RBP5.13□□□□□ -1.59
RPN9YDR427W PPZ2P33329 710 aa5.13□□□□□ -1.59
RPN9YDR427W CTF13P35203 478 aa5.13□□□□□ -1.59
RPN9YDR427W ELO3P40319 345 aa5.13□□□□□ -1.59
RPN9YDR427W TY4A-JP47023 414 aa5.13□□□□□ -1.59
RPN9YDR427W ATP25Q03153 612 aa5.13□□□□□ -1.59
RPN9YDR427W COQ11Q05892 277 aa5.13□□□□□ -1.59
RPN9YDR427W TRM11Q12463 433 aa5.13□□□□□ -1.59
RPN9YDR427W PHO8P11491 566 aa5.12□□□□□ -1.59
RPN9YDR427W SPC29P33419 253 aa5.12□□□□□ -1.59
RPN9YDR427W YIL108WP40483 696 aaKnown RBP5.12□□□□□ -1.59
RPN9YDR427W NIT3P49954 291 aa5.12□□□□□ -1.59
RPN9YDR427W IMO32P53219 342 aa5.12□□□□□ -1.59
RPN9YDR427W NOG2P53742 486 aaKnown RBP5.12□□□□□ -1.59
RPN9YDR427W YKR011CQ02209 353 aa5.12□□□□□ -1.59
RPN9YDR427W PHR1P05066 565 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
RPN9YDR427W HCA4P20448 770 aaKnown RBP5.11□□□□□ -1.59
RPN9YDR427W TYE7P33122 291 aaPredicted RBP5.11□□□□□ -1.59
RPN9YDR427W TDP1P38319 544 aa5.11□□□□□ -1.59
RPN9YDR427W SDP1P40479 209 aa5.11□□□□□ -1.59
RPN9YDR427W HSV2P50079 448 aaPredicted RBP5.11□□□□□ -1.59
RPN9YDR427W ADY4Q05955 493 aa5.11□□□□□ -1.59
RPN9YDR427W SWM1Q12379 170 aa5.11□□□□□ -1.59
RPN9YDR427W MDM12Q92328 271 aa5.11□□□□□ -1.59
RPN9YDR427W CAF20P12962 161 aaKnown RBP5.1□□□□□ -1.59
RPN9YDR427W CDC43P18898 376 aa5.1□□□□□ -1.59
RPN9YDR427W ILV6P25605 309 aaKnown RBP5.1□□□□□ -1.59
RPN9YDR427W MSH2P25847 964 aa5.1□□□□□ -1.59
RPN9YDR427W RRP14P36080 434 aaKnown RBP5.1□□□□□ -1.59
RPN9YDR427W CTF8P38877 133 aa5.1□□□□□ -1.59
RPN9YDR427W BNR1P40450 1375 aa5.1□□□□□ -1.59
RPN9YDR427W CEP3P40969 608 aa5.1□□□□□ -1.59
RPN9YDR427W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
RPN9YDR427W RNH70P53331 553 aa5.1□□□□□ -1.59
RPN9YDR427W YNL162W-AQ3E7A8 72 aa5.1□□□□□ -1.59
RPN9YDR427W TUB1P09733 447 aaKnown RBP5.09□□□□□ -1.59
RPN9YDR427W DAL7P21826 554 aa5.09□□□□□ -1.59
RPN9YDR427W CYS3P31373 394 aaKnown RBP5.09□□□□□ -1.59
RPN9YDR427W HXT16P47185 567 aa5.09□□□□□ -1.59
RPN9YDR427W REH1Q06709 432 aa5.09□□□□□ -1.59
RPN9YDR427W MET7Q08645 548 aa5.09□□□□□ -1.59
RPN9YDR427W SUT2Q12286 268 aa5.09□□□□□ -1.59
RPN9YDR427W YCL002CP25565 263 aa5.08□□□□□ -1.6
RPN9YDR427W THI4P32318 326 aa5.08□□□□□ -1.6
RPN9YDR427W MTC2P34246 357 aa5.08□□□□□ -1.6
RPN9YDR427W NMD2P38798 1089 aaKnown RBP5.08□□□□□ -1.6
RPN9YDR427W RIX1P38883 763 aaPredicted RBP5.08□□□□□ -1.6
RPN9YDR427W TAD1P53065 400 aa5.08□□□□□ -1.6
RPN9YDR427W ALG12P53730 551 aa5.08□□□□□ -1.6
RPN9YDR427W YDR514CQ04408 483 aa5.08□□□□□ -1.6
RPN9YDR427W RPS9AO13516 197 aaKnown RBP5.07□□□□□ -1.6
RPN9YDR427W TUB3P09734 445 aaKnown RBP5.07□□□□□ -1.6
RPN9YDR427W MDM10P18409 493 aa5.07□□□□□ -1.6
RPN9YDR427W UGO1Q03327 502 aa5.07□□□□□ -1.6
RPN9YDR427W LRS4Q04087 347 aaKnown RBP5.07□□□□□ -1.6
RPN9YDR427W VPS73P53142 486 aaKnown RBP5.06□□□□□ -1.6
RPN9YDR427W POB3Q04636 552 aaKnown RBP5.06□□□□□ -1.6
RPN9YDR427W CRR1Q05790 422 aa5.06□□□□□ -1.6
RPN9YDR427W RSC3Q06639 885 aa5.06□□□□□ -1.6
RPN9YDR427W YAP7Q08182 245 aa5.06□□□□□ -1.6
RPN9YDR427W THI21Q08975 551 aa5.06□□□□□ -1.6
RPN9YDR427W HAL9Q12180 1030 aa5.06□□□□□ -1.6
RPN9YDR427W ICT1Q12385 394 aa5.06□□□□□ -1.6
RPN9YDR427W YBR182C-AQ8TGU6 64 aa5.06□□□□□ -1.6
RPN9YDR427W MET6P05694 767 aaKnown RBP5.05□□□□□ -1.6
RPN9YDR427W MEF1P25039 761 aa5.05□□□□□ -1.6
RPN9YDR427W PEX6P33760 1030 aa5.05□□□□□ -1.6
RPN9YDR427W TAH11P47112 604 aa5.05□□□□□ -1.6
RPN9YDR427W DUS1P53759 423 aaKnown RBP5.05□□□□□ -1.6
RPN9YDR427W CDC9P04819 755 aa5.04□□□□□ -1.6
RPN9YDR427W RPP1P38786 293 aa5.04□□□□□ -1.6
RPN9YDR427W PCL5P38794 229 aa5.04□□□□□ -1.6
RPN9YDR427W YHR078WP38799 552 aa5.04□□□□□ -1.6
RPN9YDR427W YIL166CP40445 542 aa5.04□□□□□ -1.6
RPN9YDR427W MUP1P50276 574 aa5.04□□□□□ -1.6
RPN9YDR427W PUS2P53167 370 aa5.04□□□□□ -1.6
RPN9YDR427W NTG2Q08214 380 aa5.04□□□□□ -1.6
RPN9YDR427W YOR022CQ12204 715 aa5.04□□□□□ -1.6
RPN9YDR427W PRP4P20053 465 aaKnown RBP5.03□□□□□ -1.6
RPN9YDR427W KIN3P22209 435 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms