RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C TRP3P00937 484 aa5.73□□□□□ -1.49
NUP42YDR192C HSF1P10961 833 aa5.73□□□□□ -1.49
NUP42YDR192C STO1P34160 861 aaKnown RBP5.73□□□□□ -1.49
NUP42YDR192C TAF5P38129 798 aa5.73□□□□□ -1.49
NUP42YDR192C ERT1P38140 529 aa5.73□□□□□ -1.49
NUP42YDR192C NPP2P39997 493 aa5.73□□□□□ -1.49
NUP42YDR192C HLJ1P48353 224 aa5.73□□□□□ -1.49
NUP42YDR192C YNL193WP53870 558 aa5.73□□□□□ -1.49
NUP42YDR192C SFB2P53953 876 aa5.73□□□□□ -1.49
NUP42YDR192C MET7Q08645 548 aa5.73□□□□□ -1.49
NUP42YDR192C MEF1P25039 761 aa5.72□□□□□ -1.49
NUP42YDR192C TSR4P25040 408 aa5.72□□□□□ -1.49
NUP42YDR192C PUB1P32588 453 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
NUP42YDR192C MTC2P34246 357 aa5.72□□□□□ -1.49
NUP42YDR192C ATG19P35193 415 aa5.72□□□□□ -1.49
NUP42YDR192C YKR073CP36153 106 aa5.72□□□□□ -1.49
NUP42YDR192C PMT3P47190 753 aa5.72□□□□□ -1.49
NUP42YDR192C RAI1P53063 387 aaKnown RBP5.72□□□□□ -1.49
NUP42YDR192C YOR352WQ08816 343 aa5.72□□□□□ -1.49
NUP42YDR192C RPS9AO13516 197 aaKnown RBP5.71□□□□□ -1.5
NUP42YDR192C NOT3P06102 836 aaKnown RBP5.71□□□□□ -1.5
NUP42YDR192C SRD1P09007 221 aa5.71□□□□□ -1.5
NUP42YDR192C URA1P28272 314 aaPredicted RBP5.71□□□□□ -1.5
NUP42YDR192C HSP78P33416 811 aa5.71□□□□□ -1.5
NUP42YDR192C ENP1P38333 483 aaKnown RBP5.71□□□□□ -1.5
NUP42YDR192C CAF16P43569 289 aa5.71□□□□□ -1.5
NUP42YDR192C LSB3P43603 459 aaKnown RBP5.71□□□□□ -1.5
NUP42YDR192C YGR012WP53206 393 aa5.71□□□□□ -1.5
NUP42YDR192C RSC3Q06639 885 aa5.71□□□□□ -1.5
NUP42YDR192C XYL2Q07993 356 aa5.71□□□□□ -1.5
NUP42YDR192C PDR5P33302 1511 aaKnown RBP5.7□□□□□ -1.5
NUP42YDR192C CDC9P04819 755 aa5.7□□□□□ -1.5
NUP42YDR192C TYS1P36421 394 aaKnown RBP5.7□□□□□ -1.5
NUP42YDR192C UBP12P39538 1254 aa5.7□□□□□ -1.5
NUP42YDR192C ZRG8P40021 1076 aa5.7□□□□□ -1.5
NUP42YDR192C ZDS1P50111 915 aaKnown RBP5.7□□□□□ -1.5
NUP42YDR192C PBP1P53297 722 aaKnown RBP5.7□□□□□ -1.5
NUP42YDR192C SDA1P53313 767 aaKnown RBP5.7□□□□□ -1.5
NUP42YDR192C YNR029CP53729 429 aaKnown RBP5.7□□□□□ -1.5
NUP42YDR192C SNO2P53823 222 aa5.7□□□□□ -1.5
NUP42YDR192C BRE4Q07660 1125 aa5.7□□□□□ -1.5
NUP42YDR192C RIB2Q12362 591 aaKnown RBP5.7□□□□□ -1.5
NUP42YDR192C SSB1P11484 613 aaKnown RBP5.69□□□□□ -1.5
NUP42YDR192C GRX4P32642 244 aa5.69□□□□□ -1.5
NUP42YDR192C TYE7P33122 291 aaPredicted RBP5.69□□□□□ -1.5
NUP42YDR192C STE13P33894 931 aa5.69□□□□□ -1.5
NUP42YDR192C ABZ1P37254 787 aaPredicted RBP5.69□□□□□ -1.5
NUP42YDR192C SSB2P40150 613 aaKnown RBP5.69□□□□□ -1.5
NUP42YDR192C SNP1Q00916 300 aaPredicted RBP5.69□□□□□ -1.5
NUP42YDR192C NUP188P52593 1655 aaKnown RBP5.69□□□□□ -1.5
NUP42YDR192C MHP1P43638 1398 aa5.68□□□□□ -1.5
NUP42YDR192C TY1B-NL2Q99337 1749 aaKnown RBP5.68□□□□□ -1.5
NUP42YDR192C IML1P47170 1584 aa5.68□□□□□ -1.5
NUP42YDR192C CYC1P00044 109 aaPredicted RBP5.68□□□□□ -1.5
NUP42YDR192C ENA1P13587 1091 aa5.68□□□□□ -1.5
NUP42YDR192C SPE2P21182 396 aa5.68□□□□□ -1.5
NUP42YDR192C LIP5P32875 414 aa5.68□□□□□ -1.5
NUP42YDR192C SRP101P32916 621 aa5.68□□□□□ -1.5
NUP42YDR192C RPN10P38886 268 aaKnown RBP5.68□□□□□ -1.5
NUP42YDR192C ENA2Q01896 1091 aa5.68□□□□□ -1.5
NUP42YDR192C CDA1Q06702 301 aa5.68□□□□□ -1.5
NUP42YDR192C YLR001CQ07895 862 aa5.68□□□□□ -1.5
NUP42YDR192C ENA5Q12691 1091 aa5.68□□□□□ -1.5
NUP42YDR192C NUP145P49687 1317 aa5.68□□□□□ -1.5
NUP42YDR192C HAP1P0CE41 1502 aa5.68□□□□□ -1.5
NUP42YDR192C CMP2P14747 604 aa5.67□□□□□ -1.5
NUP42YDR192C DAL7P21826 554 aa5.67□□□□□ -1.5
NUP42YDR192C HOG1P32485 435 aa5.67□□□□□ -1.5
NUP42YDR192C MND2P40577 368 aa5.67□□□□□ -1.5
NUP42YDR192C TAD1P53065 400 aa5.67□□□□□ -1.5
NUP42YDR192C PUS2P53167 370 aa5.67□□□□□ -1.5
NUP42YDR192C YKR011CQ02209 353 aa5.67□□□□□ -1.5
NUP42YDR192C PDS5Q04264 1277 aa5.67□□□□□ -1.5
NUP42YDR192C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
NUP42YDR192C CFT1Q06632 1357 aaKnown RBP5.67□□□□□ -1.5
NUP42YDR192C RAD18P10862 487 aa5.66□□□□□ -1.5
NUP42YDR192C PCL2P25693 308 aa5.66□□□□□ -1.5
NUP42YDR192C CYS3P31373 394 aaKnown RBP5.66□□□□□ -1.5
NUP42YDR192C MCD4P36051 919 aa5.66□□□□□ -1.5
NUP42YDR192C SAP190P36123 1033 aa5.66□□□□□ -1.5
NUP42YDR192C OMA1P36163 345 aa5.66□□□□□ -1.5
NUP42YDR192C SET5P38890 526 aaKnown RBP5.66□□□□□ -1.5
NUP42YDR192C MGS1P40151 587 aa5.66□□□□□ -1.5
NUP42YDR192C RLP7P40693 322 aaKnown RBP5.66□□□□□ -1.5
NUP42YDR192C CEP3P40969 608 aa5.66□□□□□ -1.5
NUP42YDR192C ALY2P47029 1046 aa5.66□□□□□ -1.5
NUP42YDR192C YGR237CP50089 785 aa5.66□□□□□ -1.5
NUP42YDR192C IOC4Q04213 475 aa5.66□□□□□ -1.5
NUP42YDR192C SGD1Q06132 899 aa5.66□□□□□ -1.5
NUP42YDR192C THI73Q07904 523 aa5.66□□□□□ -1.5
NUP42YDR192C DIF1O13577 133 aa5.65□□□□□ -1.5
NUP42YDR192C SPE1P08432 466 aa5.65□□□□□ -1.5
NUP42YDR192C POA1P38218 177 aa5.65□□□□□ -1.5
NUP42YDR192C SHR5P41912 237 aa5.65□□□□□ -1.5
NUP42YDR192C ALO1P54783 526 aaKnown RBP5.65□□□□□ -1.5
NUP42YDR192C UME1Q03010 460 aa5.65□□□□□ -1.5
NUP42YDR192C VMR1P38735 1592 aa5.64□□□□□ -1.51
NUP42YDR192C PRC1P00729 532 aa5.64□□□□□ -1.51
NUP42YDR192C GAL10P04397 699 aa5.64□□□□□ -1.51
NUP42YDR192C SFL1P20134 766 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms