RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C TAF1P46677 1066 aa2.43□□□□□ -2.02
SWI5YDR146C YJR142WP47173 342 aa2.43□□□□□ -2.02
SWI5YDR146C ERG5P54781 538 aa2.43□□□□□ -2.02
SWI5YDR146C SNP1Q00916 300 aaPredicted RBP2.43□□□□□ -2.02
SWI5YDR146C TFB2Q02939 513 aa2.43□□□□□ -2.02
SWI5YDR146C VPS30Q02948 557 aa2.43□□□□□ -2.02
SWI5YDR146C RPS9AO13516 197 aaKnown RBP2.42□□□□□ -2.02
SWI5YDR146C PMA1P05030 918 aaKnown RBP2.42□□□□□ -2.02
SWI5YDR146C SED4P25365 1065 aa2.42□□□□□ -2.02
SWI5YDR146C KAR4P25583 335 aa2.42□□□□□ -2.02
SWI5YDR146C YHR078WP38799 552 aa2.42□□□□□ -2.02
SWI5YDR146C SET5P38890 526 aaKnown RBP2.42□□□□□ -2.02
SWI5YDR146C DSS1P39112 969 aa2.42□□□□□ -2.02
SWI5YDR146C MGS1P40151 587 aa2.42□□□□□ -2.02
SWI5YDR146C MNN10P50108 393 aaKnown RBP2.42□□□□□ -2.02
SWI5YDR146C ASI2P53895 289 aa2.42□□□□□ -2.02
SWI5YDR146C UTP14Q04500 899 aaKnown RBP2.42□□□□□ -2.02
SWI5YDR146C COG8Q04632 607 aa2.42□□□□□ -2.02
SWI5YDR146C ESC8Q08119 714 aa2.42□□□□□ -2.02
SWI5YDR146C ENB1Q08299 606 aa2.42□□□□□ -2.02
SWI5YDR146C HOG1P32485 435 aa2.42□□□□□ -2.02
SWI5YDR146C BRN1P38170 754 aa2.42□□□□□ -2.02
SWI5YDR146C PCM1P38628 557 aaKnown RBP2.42□□□□□ -2.02
SWI5YDR146C ZIP2P53061 704 aa2.42□□□□□ -2.02
SWI5YDR146C YNL193WP53870 558 aa2.42□□□□□ -2.02
SWI5YDR146C DNM1P54861 757 aa2.42□□□□□ -2.02
SWI5YDR146C YLR149CQ99296 730 aa2.42□□□□□ -2.02
SWI5YDR146C PRC1P00729 532 aa2.41□□□□□ -2.02
SWI5YDR146C MSS4P38994 779 aa2.41□□□□□ -2.02
SWI5YDR146C ALY2P47029 1046 aa2.41□□□□□ -2.02
SWI5YDR146C ZDS1P50111 915 aaKnown RBP2.41□□□□□ -2.02
SWI5YDR146C PUS2P53167 370 aa2.41□□□□□ -2.02
SWI5YDR146C MUS81Q04149 632 aaPredicted RBP2.41□□□□□ -2.02
SWI5YDR146C ATG33Q06485 197 aa2.41□□□□□ -2.02
SWI5YDR146C DIF1O13577 133 aa2.41□□□□□ -2.02
SWI5YDR146C RAD18P10862 487 aa2.41□□□□□ -2.02
SWI5YDR146C HMG1P12683 1054 aa2.41□□□□□ -2.02
SWI5YDR146C YCR015CP25616 317 aa2.41□□□□□ -2.02
SWI5YDR146C SIC1P38634 284 aa2.41□□□□□ -2.02
SWI5YDR146C PFA3P42836 336 aa2.41□□□□□ -2.02
SWI5YDR146C SSY5P47002 699 aa2.41□□□□□ -2.02
SWI5YDR146C BNA2P47125 453 aa2.41□□□□□ -2.02
SWI5YDR146C MRPS35P53292 345 aa2.41□□□□□ -2.02
SWI5YDR146C ASM4Q05166 528 aa2.41□□□□□ -2.02
SWI5YDR146C SFL1P20134 766 aa2.4□□□□□ -2.03
SWI5YDR146C CTF13P35203 478 aa2.4□□□□□ -2.03
SWI5YDR146C YKR051WP36142 418 aa2.4□□□□□ -2.03
SWI5YDR146C MPT5P39016 859 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SWI5YDR146C MCM6P53091 1017 aaKnown RBP2.4□□□□□ -2.03
SWI5YDR146C NHX1Q04121 633 aa2.4□□□□□ -2.03
SWI5YDR146C ADR1P07248 1323 aa2.4□□□□□ -2.03
SWI5YDR146C TRP4P07285 380 aaPredicted RBP2.39□□□□□ -2.03
SWI5YDR146C CCR4P31384 837 aaKnown RBP2.39□□□□□ -2.03
SWI5YDR146C YKR018CP36114 725 aa2.39□□□□□ -2.03
SWI5YDR146C SAP190P36123 1033 aa2.39□□□□□ -2.03
SWI5YDR146C SHM2P37291 469 aaKnown RBP2.39□□□□□ -2.03
SWI5YDR146C GIP4P39732 760 aa2.39□□□□□ -2.03
SWI5YDR146C VHR1P40522 640 aa2.39□□□□□ -2.03
SWI5YDR146C MET13P53128 600 aa2.39□□□□□ -2.03
SWI5YDR146C YNR029CP53729 429 aaKnown RBP2.39□□□□□ -2.03
SWI5YDR146C NTO1Q12311 748 aa2.39□□□□□ -2.03
SWI5YDR146C TRM11Q12463 433 aa2.39□□□□□ -2.03
SWI5YDR146C Q0142Q9ZZW4 58 aa2.39□□□□□ -2.03
SWI5YDR146C DEF1P35732 738 aaKnown RBP2.39□□□□□ -2.03
SWI5YDR146C SAK1P38990 1142 aa2.39□□□□□ -2.03
SWI5YDR146C GID8P40208 455 aa2.39□□□□□ -2.03
SWI5YDR146C PHO23P50947 330 aa2.39□□□□□ -2.03
SWI5YDR146C AIM14P53109 570 aa2.39□□□□□ -2.03
SWI5YDR146C GPG1P53130 126 aa2.39□□□□□ -2.03
SWI5YDR146C ARP4P80428 489 aa2.39□□□□□ -2.03
SWI5YDR146C PEX19Q07418 342 aa2.39□□□□□ -2.03
SWI5YDR146C YLR415CO13578 112 aa2.38□□□□□ -2.03
SWI5YDR146C HSL7P38274 827 aa2.38□□□□□ -2.03
SWI5YDR146C MIP6P38760 659 aaKnown RBP2.38□□□□□ -2.03
SWI5YDR146C RPN10P38886 268 aaKnown RBP2.38□□□□□ -2.03
SWI5YDR146C UBP12P39538 1254 aa2.38□□□□□ -2.03
SWI5YDR146C ECM1P39715 212 aa2.38□□□□□ -2.03
SWI5YDR146C SHR5P41912 237 aa2.38□□□□□ -2.03
SWI5YDR146C HMO1Q03973 246 aaKnown RBP2.38□□□□□ -2.03
SWI5YDR146C CRR1Q05790 422 aa2.38□□□□□ -2.03
SWI5YDR146C DCS2Q12123 353 aa2.38□□□□□ -2.03
SWI5YDR146C SWM1Q12379 170 aa2.38□□□□□ -2.03
SWI5YDR146C TRM13Q12383 476 aa2.38□□□□□ -2.03
SWI5YDR146C YGR161W-CQ3E744 92 aa2.38□□□□□ -2.03
SWI5YDR146C PFK1P16861 987 aaKnown RBP2.38□□□□□ -2.03
SWI5YDR146C HCM1P25364 564 aa2.38□□□□□ -2.03
SWI5YDR146C PMI40P29952 429 aaKnown RBP2.38□□□□□ -2.03
SWI5YDR146C RPP1P38786 293 aa2.38□□□□□ -2.03
SWI5YDR146C UBC9P50623 157 aaPredicted RBP2.38□□□□□ -2.03
SWI5YDR146C PCL10P53124 433 aa2.38□□□□□ -2.03
SWI5YDR146C YGL081WP53156 320 aa2.38□□□□□ -2.03
SWI5YDR146C GIN4Q12263 1142 aa2.38□□□□□ -2.03
SWI5YDR146C SFP1P32432 683 aa2.37□□□□□ -2.03
SWI5YDR146C GRX4P32642 244 aa2.37□□□□□ -2.03
SWI5YDR146C YBR053CP38235 358 aa2.37□□□□□ -2.03
SWI5YDR146C PZF1P39933 429 aa2.37□□□□□ -2.03
SWI5YDR146C YJR096WP47137 282 aa2.37□□□□□ -2.03
SWI5YDR146C SDA1P53313 767 aaKnown RBP2.37□□□□□ -2.03
SWI5YDR146C LEE1Q02799 301 aaKnown RBP2.37□□□□□ -2.03
SWI5YDR146C THI73Q07904 523 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 235.9 ms