RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W YLR345WQ06137 509 aa5.96□□□□□ -1.45
FOB1YDR110W RTT10Q08924 1013 aa5.96□□□□□ -1.45
FOB1YDR110W PAR32Q12515 295 aaKnown RBP5.96□□□□□ -1.45
FOB1YDR110W NTE1Q04958 1679 aa5.96□□□□□ -1.45
FOB1YDR110W CTT1P06115 562 aa5.96□□□□□ -1.46
FOB1YDR110W VBA3P25594 458 aa5.96□□□□□ -1.46
FOB1YDR110W RSC6P25632 483 aa5.96□□□□□ -1.46
FOB1YDR110W NTG1P31378 399 aa5.96□□□□□ -1.46
FOB1YDR110W FUN30P31380 1131 aa5.96□□□□□ -1.46
FOB1YDR110W DEP1P31385 405 aa5.96□□□□□ -1.46
FOB1YDR110W FBP26P32604 452 aa5.96□□□□□ -1.46
FOB1YDR110W DED81P38707 554 aaKnown RBP5.96□□□□□ -1.46
FOB1YDR110W RIX1P38883 763 aaPredicted RBP5.96□□□□□ -1.46
FOB1YDR110W YEL068CP39977 110 aa5.96□□□□□ -1.46
FOB1YDR110W ALD5P40047 520 aaKnown RBP5.96□□□□□ -1.46
FOB1YDR110W YJL070CP40361 888 aa5.96□□□□□ -1.46
FOB1YDR110W DPH1P40487 425 aaKnown RBP5.96□□□□□ -1.46
FOB1YDR110W EPL1P43572 832 aa5.96□□□□□ -1.46
FOB1YDR110W ATH1P48016 1211 aa5.96□□□□□ -1.46
FOB1YDR110W TCB2P48231 1178 aa5.96□□□□□ -1.46
FOB1YDR110W SHE4P51534 789 aa5.96□□□□□ -1.46
FOB1YDR110W PUS6P53294 404 aa5.96□□□□□ -1.46
FOB1YDR110W SHE9Q04172 456 aa5.96□□□□□ -1.46
FOB1YDR110W ARR2Q06597 130 aa5.96□□□□□ -1.46
FOB1YDR110W APL4Q12028 832 aa5.96□□□□□ -1.46
FOB1YDR110W RPO21P04050 1733 aaKnown RBP5.95□□□□□ -1.46
FOB1YDR110W BI4P03879 638 aa5.95□□□□□ -1.46
FOB1YDR110W HOM2P13663 365 aaKnown RBP5.95□□□□□ -1.46
FOB1YDR110W SED4P25365 1065 aa5.95□□□□□ -1.46
FOB1YDR110W HEM12P32347 362 aaPredicted RBP5.95□□□□□ -1.46
FOB1YDR110W VPS17P32913 551 aa5.95□□□□□ -1.46
FOB1YDR110W MDL1P33310 695 aa5.95□□□□□ -1.46
FOB1YDR110W MRP8P35719 219 aa5.95□□□□□ -1.46
FOB1YDR110W RAD55P38953 406 aa5.95□□□□□ -1.46
FOB1YDR110W BUD16P39988 312 aa5.95□□□□□ -1.46
FOB1YDR110W YJL068CP40363 299 aa5.95□□□□□ -1.46
FOB1YDR110W PKP1P40530 394 aa5.95□□□□□ -1.46
FOB1YDR110W PXA1P41909 870 aa5.95□□□□□ -1.46
FOB1YDR110W ALR2P43553 858 aa5.95□□□□□ -1.46
FOB1YDR110W MOT3P54785 490 aaKnown RBP5.95□□□□□ -1.46
FOB1YDR110W YPL071CQ02864 156 aa5.95□□□□□ -1.46
FOB1YDR110W GEA2P39993 1459 aaKnown RBP5.95□□□□□ -1.46
FOB1YDR110W SSM4P40318 1319 aa5.95□□□□□ -1.46
FOB1YDR110W HMG1P12683 1054 aa5.94□□□□□ -1.46
FOB1YDR110W RRP7P25368 297 aaPredicted RBP5.94□□□□□ -1.46
FOB1YDR110W MSH1P25846 959 aa5.94□□□□□ -1.46
FOB1YDR110W ASF2P32448 525 aaPredicted RBP5.94□□□□□ -1.46
FOB1YDR110W GND1P38720 489 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W RTS1P38903 757 aa5.94□□□□□ -1.46
FOB1YDR110W STN1P38960 494 aa5.94□□□□□ -1.46
FOB1YDR110W SWD1P39706 426 aa5.94□□□□□ -1.46
FOB1YDR110W OAF1P39720 1047 aaPredicted RBP5.94□□□□□ -1.46
FOB1YDR110W STL1P39932 569 aa5.94□□□□□ -1.46
FOB1YDR110W KAP123P40069 1113 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W NEO1P40527 1151 aa5.94□□□□□ -1.46
FOB1YDR110W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
FOB1YDR110W STU2P46675 888 aa5.94□□□□□ -1.46
FOB1YDR110W VPS53P47061 822 aa5.94□□□□□ -1.46
FOB1YDR110W RTC4P53850 401 aa5.94□□□□□ -1.46
FOB1YDR110W PEX25Q02969 394 aa5.94□□□□□ -1.46
FOB1YDR110W ADE13Q05911 482 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W YPR084WQ06821 456 aa5.94□□□□□ -1.46
FOB1YDR110W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
FOB1YDR110W FRE6Q12473 712 aa5.94□□□□□ -1.46
FOB1YDR110W LAT1P12695 482 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W PRP28P23394 588 aa5.94□□□□□ -1.46
FOB1YDR110W ERG3P32353 365 aa5.94□□□□□ -1.46
FOB1YDR110W EFB1P32471 206 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W NIP1P32497 812 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W PRP19P32523 503 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W MCM7P38132 845 aa5.94□□□□□ -1.46
FOB1YDR110W ECM2P38241 364 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W PEX32P38292 413 aa5.94□□□□□ -1.46
FOB1YDR110W EFM2P38347 419 aa5.94□□□□□ -1.46
FOB1YDR110W SPT8P38915 602 aa5.94□□□□□ -1.46
FOB1YDR110W ATG3P40344 310 aa5.94□□□□□ -1.46
FOB1YDR110W SEC28P40509 296 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W NAS2P40555 220 aa5.94□□□□□ -1.46
FOB1YDR110W EMW1P42842 904 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W SUT1P53032 299 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W YNR068CP53754 272 aa5.94□□□□□ -1.46
FOB1YDR110W YPL109CQ02981 657 aa5.94□□□□□ -1.46
FOB1YDR110W STE20Q03497 939 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W YDL124WQ07551 312 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W NOP6Q07623 225 aaKnown RBP5.94□□□□□ -1.46
FOB1YDR110W VPS15P22219 1454 aa5.93□□□□□ -1.46
FOB1YDR110W TOP3P13099 656 aa5.93□□□□□ -1.46
FOB1YDR110W MCM5P29496 775 aaKnown RBP5.93□□□□□ -1.46
FOB1YDR110W MLS1P30952 554 aa5.93□□□□□ -1.46
FOB1YDR110W SMI1P32566 505 aa5.93□□□□□ -1.46
FOB1YDR110W PRP40P33203 583 aaKnown RBP5.93□□□□□ -1.46
FOB1YDR110W YKT6P36015 200 aaKnown RBP5.93□□□□□ -1.46
FOB1YDR110W CCC2P38995 1004 aa5.93□□□□□ -1.46
FOB1YDR110W AIM10P39965 576 aaKnown RBP5.93□□□□□ -1.46
FOB1YDR110W YEL023CP39992 682 aa5.93□□□□□ -1.46
FOB1YDR110W UTP18P40362 594 aaPredicted RBP5.93□□□□□ -1.46
FOB1YDR110W CEG1Q01159 459 aaPredicted RBP5.93□□□□□ -1.46
FOB1YDR110W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
FOB1YDR110W CAB1Q04430 367 aa5.93□□□□□ -1.46
FOB1YDR110W BLS1Q06071 122 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms