RNA–Protein interactions for RNA: YDL213C

NOP6, Transcript of rRNA-binding protein required for 40S ribosomal subunit biogenesis, yeast

Gene NOP6, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP6	YDL213C	SEC18	P18759	758 aa	Known RBP	4.37	□□□□□ -1.71
NOP6	YDL213C	MSH1	P25846	959 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	YKU70	P32807	602 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	EMC3	P36039	253 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	ADD66	P36040	267 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	EBP2	P36049	427 aa	Known RBP	4.37	□□□□□ -1.71
NOP6	YDL213C	YKL077W	P36081	392 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	MUD2	P36084	527 aa	Known RBP	4.37	□□□□□ -1.71
NOP6	YDL213C	NCL1	P38205	684 aa	Known RBP	4.37	□□□□□ -1.71
NOP6	YDL213C	RGD1	P38339	666 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	JEM1	P40358	645 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	RIC1	P40395	1056 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	GYP8	P43570	497 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	JJJ2	P46997	583 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	VPS53	P47061	822 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	BFA1	P47113	574 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	SKP1	P52286	194 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	ZIP2	P53061	704 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	AIM14	P53109	570 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	YAP1802	P53309	568 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	MRPL19	P53875	158 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	TEP1	P53916	434 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	CEG1	Q01159	459 aa	Predicted RBP	4.37	□□□□□ -1.71
NOP6	YDL213C	RKM2	Q03942	479 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	TAF11	Q04226	346 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	VTI1	Q04338	217 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	VHS3	Q08438	674 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	PGC1	Q08959	321 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	RRG1	Q12167	365 aa	Predicted RBP	4.37	□□□□□ -1.71
NOP6	YDL213C	KCS1	Q12494	1050 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	APM4	Q99186	491 aa		4.37	□□□□□ -1.71
NOP6	YDL213C	GLT1	Q12680	2145 aa	Known RBP	4.36	□□□□□ -1.71
NOP6	YDL213C	SEM1	O94742	89 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	BI4	P03879	638 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	ADE8	P04161	214 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	HOP1	P20050	605 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	CDC48	P25694	835 aa	Known RBP	4.36	□□□□□ -1.71
NOP6	YDL213C	SHM2	P37291	469 aa	Known RBP	4.36	□□□□□ -1.71
NOP6	YDL213C	SHM1	P37292	490 aa	Predicted RBP	4.36	□□□□□ -1.71
NOP6	YDL213C	MRPL16	P38064	232 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	YBR238C	P38330	731 aa	Known RBP	4.36	□□□□□ -1.71
NOP6	YDL213C	TDA3	P38758	523 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	DAM1	P53267	343 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	YNL058C	P53947	316 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	PTA1	Q01329	785 aa	Predicted RBP	4.36	□□□□□ -1.71
NOP6	YDL213C	CUS1	Q02554	436 aa	Predicted RBP	4.36	□□□□□ -1.71
NOP6	YDL213C	YDR338C	Q05497	695 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	YDR286C	Q05530	114 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	ECM38	Q05902	660 aa	Predicted RBP	4.36	□□□□□ -1.71
NOP6	YDL213C	DUS3	Q06053	668 aa	Known RBP	4.36	□□□□□ -1.71
NOP6	YDL213C	HIM1	Q06674	414 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	HFI1	Q12060	488 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	TAH18	Q12181	623 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	GLO4	Q12320	285 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	SMC6	Q12749	1114 aa		4.36	□□□□□ -1.71
NOP6	YDL213C	LEU1	P07264	779 aa	Known RBP	4.35	□□□□□ -1.71
NOP6	YDL213C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.35	□□□□□ -1.71
NOP6	YDL213C	TY1A-DR6	P0CX70	440 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	TY1A-ER1	P0CX71	440 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	TY1A-LR2	P0CX72	440 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	TY1A-PL	P0CX73	440 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	TY1A-JR1	P0CX74	440 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	TY1A-LR3	P0CX75	440 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	TY1A-ML2	P0CX76	440 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	FUS1	P11710	512 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	MET8	P15807	274 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	KNS1	P32350	737 aa	Predicted RBP	4.35	□□□□□ -1.71
NOP6	YDL213C	NGG1	P32494	702 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	SER1	P33330	395 aa	Known RBP	4.35	□□□□□ -1.71
NOP6	YDL213C	SLC1	P33333	303 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	YRO2	P38079	344 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	HXT6	P39003	570 aa	Known RBP	4.35	□□□□□ -1.71
NOP6	YDL213C	HXT7	P39004	570 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	CCT3	P39077	534 aa	Known RBP	4.35	□□□□□ -1.71
NOP6	YDL213C	TOK1	P40310	691 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	AXL1	P40851	1208 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	ASK10	P48361	1146 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	PCL10	P53124	433 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	GRX3	Q03835	250 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	SYF1	Q04048	859 aa	Predicted RBP	4.35	□□□□□ -1.71
NOP6	YDL213C	NHX1	Q04121	633 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	UTP5	Q04177	643 aa	Known RBP	4.35	□□□□□ -1.71
NOP6	YDL213C	SPP382	Q06411	708 aa	Predicted RBP	4.35	□□□□□ -1.71
NOP6	YDL213C	MET7	Q08645	548 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	TY1A-GR1	Q12085	440 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	ARP7	Q12406	477 aa		4.35	□□□□□ -1.71
NOP6	YDL213C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.35	□□□□□ -1.71
NOP6	YDL213C	TY1A-OL	Q92392	440 aa	Known RBP	4.35	□□□□□ -1.71
NOP6	YDL213C	RPS21A	P0C0V8	87 aa	Known RBP	4.34	□□□□□ -1.71
NOP6	YDL213C	MTF2	P10849	440 aa		4.34	□□□□□ -1.71
NOP6	YDL213C	RED1	P14291	827 aa		4.34	□□□□□ -1.71
NOP6	YDL213C	PDC5	P16467	563 aa	Known RBP	4.34	□□□□□ -1.71
NOP6	YDL213C	DAL7	P21826	554 aa		4.34	□□□□□ -1.71
NOP6	YDL213C	RPC53	P25441	422 aa		4.34	□□□□□ -1.71
NOP6	YDL213C	CCR4	P31384	837 aa	Known RBP	4.34	□□□□□ -1.71
NOP6	YDL213C	AFG2	P32794	780 aa		4.34	□□□□□ -1.71
NOP6	YDL213C	RPT3	P33298	428 aa	Known RBP	4.34	□□□□□ -1.71
NOP6	YDL213C	AFR1	P33304	620 aa		4.34	□□□□□ -1.71
NOP6	YDL213C	REC104	P33323	182 aa		4.34	□□□□□ -1.71
NOP6	YDL213C	TAT1	P38085	619 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms