RNA–Protein interactions for RNA: YBR274W

CHK1, Transcript of Serine/threonine kinase and DNA damage checkpoint effector, yeast

Gene CHK1, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHK1	YBR274W	VPS62	P53285	467 aa		4.6	□□□□□ -1.67
CHK1	YBR274W	DOS2	P54858	310 aa		4.6	□□□□□ -1.67
CHK1	YBR274W	YAP6	Q03935	383 aa		4.6	□□□□□ -1.67
CHK1	YBR274W	TAP42	Q04372	366 aa		4.6	□□□□□ -1.67
CHK1	YBR274W	YDR306C	Q06640	478 aa		4.6	□□□□□ -1.67
CHK1	YBR274W	NOP12	Q08208	459 aa	Known RBP	4.6	□□□□□ -1.67
CHK1	YBR274W	HMI1	Q12039	706 aa		4.6	□□□□□ -1.67
CHK1	YBR274W	EMC1	P25574	760 aa		4.59	□□□□□ -1.67
CHK1	YBR274W	SHM2	P37291	469 aa	Known RBP	4.59	□□□□□ -1.67
CHK1	YBR274W	ECM21	P38167	1117 aa	Known RBP	4.59	□□□□□ -1.67
CHK1	YBR274W	GIC1	P38785	314 aa		4.59	□□□□□ -1.67
CHK1	YBR274W	SPF1	P39986	1215 aa	Known RBP	4.59	□□□□□ -1.67
CHK1	YBR274W	MET12	P46151	657 aa		4.59	□□□□□ -1.67
CHK1	YBR274W	FPR4	Q06205	392 aa	Predicted RBP	4.59	□□□□□ -1.67
CHK1	YBR274W	TPO1	Q07824	586 aa		4.59	□□□□□ -1.67
CHK1	YBR274W	ADE8	P04161	214 aa		4.58	□□□□□ -1.68
CHK1	YBR274W	HSF1	P10961	833 aa		4.58	□□□□□ -1.68
CHK1	YBR274W	PRP9	P19736	530 aa	Known RBP	4.58	□□□□□ -1.68
CHK1	YBR274W	STE11	P23561	717 aa		4.58	□□□□□ -1.68
CHK1	YBR274W	RPC82	P32349	654 aa		4.58	□□□□□ -1.68
CHK1	YBR274W	AAR2	P32357	355 aa	Predicted RBP	4.58	□□□□□ -1.68
CHK1	YBR274W	CCC2	P38995	1004 aa		4.58	□□□□□ -1.68
CHK1	YBR274W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CHK1	YBR274W	YPR196W	Q06595	470 aa		4.58	□□□□□ -1.68
CHK1	YBR274W	CTS1	P29029	562 aa		4.57	□□□□□ -1.68
CHK1	YBR274W	SRP101	P32916	621 aa		4.57	□□□□□ -1.68
CHK1	YBR274W	MNN10	P50108	393 aa	Known RBP	4.57	□□□□□ -1.68
CHK1	YBR274W	SUB1	P54000	292 aa	Known RBP	4.57	□□□□□ -1.68
CHK1	YBR274W	YLR224W	Q05947	369 aa		4.57	□□□□□ -1.68
CHK1	YBR274W	TMA10	Q06177	86 aa		4.57	□□□□□ -1.68
CHK1	YBR274W	ADY3	Q07732	790 aa		4.57	□□□□□ -1.68
CHK1	YBR274W	RIM15	P43565	1770 aa		4.57	□□□□□ -1.68
CHK1	YBR274W	RAD4	P14736	754 aa		4.57	□□□□□ -1.68
CHK1	YBR274W	LST4	P34239	828 aa		4.57	□□□□□ -1.68
CHK1	YBR274W	ATG19	P35193	415 aa		4.57	□□□□□ -1.68
CHK1	YBR274W	YKR078W	P36158	585 aa	Known RBP	4.57	□□□□□ -1.68
CHK1	YBR274W	GYP7	P48365	746 aa		4.57	□□□□□ -1.68
CHK1	YBR274W	MCM6	P53091	1017 aa	Known RBP	4.57	□□□□□ -1.68
CHK1	YBR274W	SSF2	Q12153	453 aa	Predicted RBP	4.57	□□□□□ -1.68
CHK1	YBR274W	HIS5	P07172	385 aa		4.56	□□□□□ -1.68
CHK1	YBR274W	GRX1	P25373	110 aa	Known RBP	4.56	□□□□□ -1.68
CHK1	YBR274W	YBR184W	P38299	523 aa		4.56	□□□□□ -1.68
CHK1	YBR274W	YER158C	P40095	573 aa		4.56	□□□□□ -1.68
CHK1	YBR274W	HIM1	Q06674	414 aa		4.56	□□□□□ -1.68
CHK1	YBR274W	CDA1	Q06702	301 aa		4.56	□□□□□ -1.68
CHK1	YBR274W	SPO75	Q07798	868 aa		4.56	□□□□□ -1.68
CHK1	YBR274W	BUG1	Q12191	341 aa		4.56	□□□□□ -1.68
CHK1	YBR274W	SPE1	P08432	466 aa		4.55	□□□□□ -1.68
CHK1	YBR274W	OSM1	P21375	501 aa	Known RBP	4.55	□□□□□ -1.68
CHK1	YBR274W	CDC48	P25694	835 aa	Known RBP	4.55	□□□□□ -1.68
CHK1	YBR274W	SFB2	P53953	876 aa		4.55	□□□□□ -1.68
CHK1	YBR274W	MHP1	P43638	1398 aa		4.55	□□□□□ -1.68
CHK1	YBR274W	CDC11	P32458	415 aa		4.54	□□□□□ -1.68
CHK1	YBR274W	STE5	P32917	917 aa		4.54	□□□□□ -1.68
CHK1	YBR274W	YRO2	P38079	344 aa		4.54	□□□□□ -1.68
CHK1	YBR274W	PLB1	P39105	664 aa		4.54	□□□□□ -1.68
CHK1	YBR274W	SIT1	P39980	628 aa		4.54	□□□□□ -1.68
CHK1	YBR274W	IOC3	P43596	787 aa		4.54	□□□□□ -1.68
CHK1	YBR274W	NAN1	Q02931	896 aa	Known RBP	4.54	□□□□□ -1.68
CHK1	YBR274W	GSF2	Q04697	403 aa	Known RBP	4.54	□□□□□ -1.68
CHK1	YBR274W	TUB2	P02557	457 aa	Known RBP	4.53	□□□□□ -1.68
CHK1	YBR274W	NPP2	P39997	493 aa		4.53	□□□□□ -1.68
CHK1	YBR274W	NNF1	P47149	201 aa		4.53	□□□□□ -1.68
CHK1	YBR274W	HCM1	P25364	564 aa		4.53	□□□□□ -1.69
CHK1	YBR274W	TSL1	P38427	1098 aa	Known RBP	4.53	□□□□□ -1.69
CHK1	YBR274W	NMD2	P38798	1089 aa	Known RBP	4.53	□□□□□ -1.69
CHK1	YBR274W	CHA4	P43634	648 aa		4.53	□□□□□ -1.69
CHK1	YBR274W	EAF6	P47128	113 aa		4.53	□□□□□ -1.69
CHK1	YBR274W	CTF4	Q01454	927 aa		4.53	□□□□□ -1.69
CHK1	YBR274W	PDS5	Q04264	1277 aa		4.53	□□□□□ -1.69
CHK1	YBR274W	NUP145	P49687	1317 aa		4.52	□□□□□ -1.69
CHK1	YBR274W	TRM2	P33753	639 aa		4.52	□□□□□ -1.69
CHK1	YBR274W	NUG1	P40010	520 aa	Known RBP	4.52	□□□□□ -1.69
CHK1	YBR274W	ALR2	P43553	858 aa		4.52	□□□□□ -1.69
CHK1	YBR274W	PFD1	P46988	109 aa		4.52	□□□□□ -1.69
CHK1	YBR274W	CCM1	P48237	864 aa	Predicted RBP	4.52	□□□□□ -1.69
CHK1	YBR274W	RAI1	P53063	387 aa	Known RBP	4.52	□□□□□ -1.69
CHK1	YBR274W	YBP2	P53169	641 aa		4.52	□□□□□ -1.69
CHK1	YBR274W	ERP6	P53198	216 aa		4.52	□□□□□ -1.69
CHK1	YBR274W	VPS30	Q02948	557 aa		4.52	□□□□□ -1.69
CHK1	YBR274W	VPS72	Q03388	795 aa		4.52	□□□□□ -1.69
CHK1	YBR274W	EAF1	Q06337	982 aa		4.52	□□□□□ -1.69
CHK1	YBR274W	OSH2	Q12451	1283 aa		4.52	□□□□□ -1.69
CHK1	YBR274W	DSD1	P53095	428 aa		4.51	□□□□□ -1.69
CHK1	YBR274W	LCD1	Q04377	747 aa		4.51	□□□□□ -1.69
CHK1	YBR274W	FMP25	Q08023	583 aa		4.51	□□□□□ -1.69
CHK1	YBR274W	NOT3	P06102	836 aa	Known RBP	4.5	□□□□□ -1.69
CHK1	YBR274W	NPP1	P25353	742 aa		4.5	□□□□□ -1.69
CHK1	YBR274W	HSP104	P31539	908 aa	Known RBP	4.5	□□□□□ -1.69
CHK1	YBR274W	DCG1	P32460	244 aa		4.5	□□□□□ -1.69
CHK1	YBR274W	SPC42	P36094	363 aa		4.5	□□□□□ -1.69
CHK1	YBR274W	YBR238C	P38330	731 aa	Known RBP	4.5	□□□□□ -1.69
CHK1	YBR274W	URM1	P40554	99 aa	Predicted RBP	4.5	□□□□□ -1.69
CHK1	YBR274W	UTP8	P53276	713 aa	Known RBP	4.5	□□□□□ -1.69
CHK1	YBR274W	RTS3	P53289	263 aa		4.5	□□□□□ -1.69
CHK1	YBR274W	CTT1	P06115	562 aa		4.49	□□□□□ -1.69
CHK1	YBR274W	ARE1	P25628	610 aa		4.49	□□□□□ -1.69
CHK1	YBR274W	RPL8B	P29453	256 aa	Known RBP	4.49	□□□□□ -1.69
CHK1	YBR274W	HBS1	P32769	611 aa	Known RBP	4.49	□□□□□ -1.69
CHK1	YBR274W	AKL1	P38080	1108 aa	Known RBP	4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms