RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	HSV2	P50079	448 aa	Predicted RBP	6.3	□□□□□ -1.4
UBS1	YBR165W	ASI2	P53895	289 aa		6.3	□□□□□ -1.4
UBS1	YBR165W	CTF4	Q01454	927 aa		6.3	□□□□□ -1.4
UBS1	YBR165W	RAD53	P22216	821 aa		6.29	□□□□□ -1.4
UBS1	YBR165W	YLR040C	Q07988	224 aa		6.29	□□□□□ -1.4
UBS1	YBR165W	ERG4	P25340	473 aa		6.28	□□□□□ -1.4
UBS1	YBR165W	SET5	P38890	526 aa	Known RBP	6.28	□□□□□ -1.4
UBS1	YBR165W	NUP82	P40368	713 aa		6.28	□□□□□ -1.4
UBS1	YBR165W	VHR1	P40522	640 aa		6.28	□□□□□ -1.4
UBS1	YBR165W	RLP7	P40693	322 aa	Known RBP	6.28	□□□□□ -1.4
UBS1	YBR165W	SSY5	P47002	699 aa		6.28	□□□□□ -1.4
UBS1	YBR165W	ZDS1	P50111	915 aa	Known RBP	6.28	□□□□□ -1.4
UBS1	YBR165W	YLR125W	Q12138	136 aa		6.28	□□□□□ -1.4
UBS1	YBR165W	MDM12	Q92328	271 aa		6.28	□□□□□ -1.4
UBS1	YBR165W	YTA7	P40340	1379 aa		6.28	□□□□□ -1.4
UBS1	YBR165W	MTC2	P34246	357 aa		6.27	□□□□□ -1.41
UBS1	YBR165W	RPP1	P38786	293 aa		6.27	□□□□□ -1.41
UBS1	YBR165W	MUS81	Q04149	632 aa	Predicted RBP	6.27	□□□□□ -1.41
UBS1	YBR165W	RSC3	Q06639	885 aa		6.27	□□□□□ -1.41
UBS1	YBR165W	CIT2	P08679	460 aa		6.26	□□□□□ -1.41
UBS1	YBR165W	SAP190	P36123	1033 aa		6.26	□□□□□ -1.41
UBS1	YBR165W	PZF1	P39933	429 aa		6.26	□□□□□ -1.41
UBS1	YBR165W	YOL073C	Q08232	322 aa		6.26	□□□□□ -1.41
UBS1	YBR165W	MRPS35	P53292	345 aa		6.25	□□□□□ -1.41
UBS1	YBR165W	RNT1	Q02555	471 aa		6.25	□□□□□ -1.41
UBS1	YBR165W	PKH1	Q03407	766 aa		6.25	□□□□□ -1.41
UBS1	YBR165W	GPR1	Q12361	961 aa		6.25	□□□□□ -1.41
UBS1	YBR165W	DIF1	O13577	133 aa		6.24	□□□□□ -1.41
UBS1	YBR165W	PHO8	P11491	566 aa		6.24	□□□□□ -1.41
UBS1	YBR165W	NGG1	P32494	702 aa		6.24	□□□□□ -1.41
UBS1	YBR165W	SUL1	P38359	859 aa		6.24	□□□□□ -1.41
UBS1	YBR165W	SAK1	P38990	1142 aa		6.24	□□□□□ -1.41
UBS1	YBR165W	OSW7	P43611	510 aa		6.24	□□□□□ -1.41
UBS1	YBR165W	ZIP2	P53061	704 aa		6.24	□□□□□ -1.41
UBS1	YBR165W	FPR4	Q06205	392 aa	Predicted RBP	6.24	□□□□□ -1.41
UBS1	YBR165W	TRM13	Q12383	476 aa		6.24	□□□□□ -1.41
UBS1	YBR165W	PER1	P25625	357 aa		6.23	□□□□□ -1.41
UBS1	YBR165W	SHR5	P41912	237 aa		6.23	□□□□□ -1.41
UBS1	YBR165W	PFA3	P42836	336 aa		6.23	□□□□□ -1.41
UBS1	YBR165W	DLT1	Q04216	342 aa		6.23	□□□□□ -1.41
UBS1	YBR165W	YLR415C	O13578	112 aa		6.22	□□□□□ -1.41
UBS1	YBR165W	MET3	P08536	511 aa		6.22	□□□□□ -1.41
UBS1	YBR165W	MSH2	P25847	964 aa		6.22	□□□□□ -1.41
UBS1	YBR165W	MCD4	P36051	919 aa		6.22	□□□□□ -1.41
UBS1	YBR165W	CAF16	P43569	289 aa		6.22	□□□□□ -1.41
UBS1	YBR165W	ALY2	P47029	1046 aa		6.22	□□□□□ -1.41
UBS1	YBR165W	YDR338C	Q05497	695 aa		6.22	□□□□□ -1.41
UBS1	YBR165W	PPR1	P07272	904 aa	Predicted RBP	6.21	□□□□□ -1.42
UBS1	YBR165W	ALG7	P07286	448 aa		6.21	□□□□□ -1.42
UBS1	YBR165W	ELO3	P40319	345 aa		6.21	□□□□□ -1.42
UBS1	YBR165W	FKH2	P41813	862 aa		6.21	□□□□□ -1.42
UBS1	YBR165W	UGO1	Q03327	502 aa		6.21	□□□□□ -1.42
UBS1	YBR165W	CDC9	P04819	755 aa		6.2	□□□□□ -1.42
UBS1	YBR165W	GSY1	P23337	708 aa		6.2	□□□□□ -1.42
UBS1	YBR165W	STO1	P34160	861 aa	Known RBP	6.2	□□□□□ -1.42
UBS1	YBR165W	SIC1	P38634	284 aa		6.2	□□□□□ -1.42
UBS1	YBR165W	OAR1	P35731	278 aa		6.19	□□□□□ -1.42
UBS1	YBR165W	MOH1	P38191	138 aa		6.19	□□□□□ -1.42
UBS1	YBR165W	AMA1	P50082	593 aa		6.19	□□□□□ -1.42
UBS1	YBR165W	FRE5	Q08908	694 aa		6.19	□□□□□ -1.42
UBS1	YBR165W	CAF20	P12962	161 aa	Known RBP	6.18	□□□□□ -1.42
UBS1	YBR165W	MEF1	P25039	761 aa		6.18	□□□□□ -1.42
UBS1	YBR165W	THI4	P32318	326 aa		6.18	□□□□□ -1.42
UBS1	YBR165W	YBR053C	P38235	358 aa		6.18	□□□□□ -1.42
UBS1	YBR165W	MTR3	P48240	250 aa	Predicted RBP	6.18	□□□□□ -1.42
UBS1	YBR165W	MUP1	P50276	574 aa		6.18	□□□□□ -1.42
UBS1	YBR165W	SNP1	Q00916	300 aa	Predicted RBP	6.18	□□□□□ -1.42
UBS1	YBR165W	NRG1	Q03125	231 aa		6.18	□□□□□ -1.42
UBS1	YBR165W	ASM4	Q05166	528 aa		6.18	□□□□□ -1.42
UBS1	YBR165W	OMS1	Q06668	471 aa		6.18	□□□□□ -1.42
UBS1	YBR165W	VBA3	P25594	458 aa		6.17	□□□□□ -1.42
UBS1	YBR165W	YBR259W	P38338	688 aa		6.17	□□□□□ -1.42
UBS1	YBR165W	ADY4	Q05955	493 aa		6.17	□□□□□ -1.42
UBS1	YBR165W	PEX6	P33760	1030 aa		6.16	□□□□□ -1.42
UBS1	YBR165W	DSS1	P39112	969 aa		6.16	□□□□□ -1.42
UBS1	YBR165W	BNA2	P47125	453 aa		6.16	□□□□□ -1.42
UBS1	YBR165W	POB3	Q04636	552 aa	Known RBP	6.16	□□□□□ -1.42
UBS1	YBR165W	CRR1	Q05790	422 aa		6.16	□□□□□ -1.42
UBS1	YBR165W	SRD1	P09007	221 aa		6.15	□□□□□ -1.42
UBS1	YBR165W	LAT1	P12695	482 aa	Known RBP	6.15	□□□□□ -1.42
UBS1	YBR165W	RPN10	P38886	268 aa	Known RBP	6.15	□□□□□ -1.42
UBS1	YBR165W	ECM1	P39715	212 aa		6.15	□□□□□ -1.42
UBS1	YBR165W	YIR042C	P40586	236 aa		6.15	□□□□□ -1.42
UBS1	YBR165W	TGL5	Q12043	749 aa		6.15	□□□□□ -1.42
UBS1	YBR165W	ACF2	Q12168	779 aa		6.15	□□□□□ -1.42
UBS1	YBR165W	ATG11	Q12527	1178 aa		6.15	□□□□□ -1.42
UBS1	YBR165W	YLR149C	Q99296	730 aa		6.14	□□□□□ -1.43
UBS1	YBR165W	MET6	P05694	767 aa	Known RBP	6.13	□□□□□ -1.43
UBS1	YBR165W	MIH1	P23748	554 aa		6.13	□□□□□ -1.43
UBS1	YBR165W	HOG1	P32485	435 aa		6.13	□□□□□ -1.43
UBS1	YBR165W	YJL163C	P46996	555 aa		6.13	□□□□□ -1.43
UBS1	YBR165W	COG8	Q04632	607 aa		6.13	□□□□□ -1.43
UBS1	YBR165W	YEL1	P34225	687 aa		6.12	□□□□□ -1.43
UBS1	YBR165W	RRP14	P36080	434 aa	Known RBP	6.12	□□□□□ -1.43
UBS1	YBR165W	PPS1	P38148	807 aa		6.12	□□□□□ -1.43
UBS1	YBR165W	BAP3	P41815	604 aa		6.12	□□□□□ -1.43
UBS1	YBR165W	YFL052W	P43551	465 aa		6.12	□□□□□ -1.43
UBS1	YBR165W	STB4	P50104	949 aa		6.12	□□□□□ -1.43
UBS1	YBR165W	NPY1	P53164	384 aa		6.12	□□□□□ -1.43
UBS1	YBR165W	NHX1	Q04121	633 aa		6.12	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms